ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◣ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NVL
NME6
PSMG2
CEP76
MAB21L2
EXOC2
DUX4
S100A10
ZNF503
TAOK3
SUDS3
DYNC1LI2
VTI1B
IPO13
S1PR4
NCLN
PRDM6
VDAC2
HSPA9
RWDD1
NUP85
FAM187A
EFTUD2
CCDC103
SP2
EXOSC5
BCKDHA
GATA4
IMPG1
CCKAR
REXO1
RPL21
DCTN1
HOXA1
HOXA2
IFI16
PYDC5
SLC35B1
TBCK
AIMP1
POLR2E
GPX4
NUP205
BBS9
SRD5A1
SEC61B
ALG2
STAM2
MRPS7
MIF4GD
GGA3
ARHGEF10L
STAM
RASL12
KBTBD13
NTRK2
IER3IP1
C19orf48
TSN
ATP5MG
GOSR2
NNAT
BLCAP
PES1
UPF2
UBXN10
PLA2G2C
ACTR10
ZNF576
IRGQ
HADHB
HADHA
VARS1
SUPV3L1
MYO1B
HOXB3
HOXB5
MRPS5
SKP1
PSMD12
TSNAX
GOLGA5
RBBP5
PAK1IP1
C6orf52
PNO1
LYRM4
FARS2
ETFBKMT
LOC102724770
DGCR6
FARSB
CAND1
DMD
PCBP1
PDE4DIP
HAND1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
MVB12A
BST2
SART3
ISCU
PI4KB
ERI3
RPL34
RUNX1T1
SMC2
TMED1
PLCZ1
CAPZA3
RABGGTB
KITLG
USP1
COX7A2L
FRG2C
ZRANB2
PROSER1
NHLRC3
CELF4
SF3B3
COG4
METTL3
SALL2
ADK
AP3M1
ANAPC7
TBX2
RBKS
BABAM2
ICE1
SFI1
EIF4ENIF1
CCDC33
TBX3
UFM1
LRRN4
RPS12
CD34
LAPTM4B
SELENOF
HS2ST1
TM9SF1
IPO4
TSSK4
NR2F1
CAPRIN1
MOG
XPNPEP3
ST13
DNAJB7
HSPA1B
RTL1
MECOM
RPS27A
CLHC1
MEIS1
DPH6
PAF1
PDAP1
BUD31
RPL35A
IQCG
LMLN
LIN28A
PIP4P1
OSGEP
APEX1
OR5K2
NTAQ1
GGCT
TXNDC2
PPP1R1B
ELOVL6
CRABP2
DDAH1
CCN1
PLAGL1
SIRT4
HAND2
SCRG1
SLC3A2
CCDC183
TMEM141
C6orf47
BAG6
APOM
CLGN
LMO4
ADAMTS8
NUBP1
VPS13A
NFKBIL1
DDX39B
ATP6V1G2
PAEP
CXXC4
HOXC6
HOXC4
HOXC8
OR6B2
NDUFA10
COMMD1
CCT4
FYB2
PRXL2A
KRTAP9-7
ERVW-1
KDM2B
TAFA3
OAZ3
MRPL9
NFIA
HEXIM2
PDE12
NEO1
PLEKHG1
TEX9
RFX7
MGST1
DIAPH3
CITED2
STK36
RNF25
PIN4
TMEM14A
ARHGAP10
FGF5
LZTS1
MEIS2
PPP1R21
ZFHX4
SSH1
PDE6B
SUCLG1
HPCAL4
HOXA3
HOXA4
HOXA5
ST3GAL6
KRTAP23-1
MRTFB
LIX1
DMAC1
PAX3
HOXB1
POLD2
MYL7
OBP2B
PRUNE2
CPA1
OLFM1
C10orf82
TNC
REEP5
NXPH2
MELK
ZNF608
UNC5C
DACT2
MME
GOLGA8T
GOLGA8K
ASPG
PPFIBP2
CCR9
TMEM120B
SLC19A2
AKAP12
BRINP1
C8orf34
MEOX1
ACKR3
ARID3C
DCTN3
ZAP70
HIP1
CATSPERG
GADD45A
PTGES2
FAM200B
POU2F1
GPR84
POP5
NIBAN1
LOC102723360
WT1
CD244
KIAA1217
FLVCR1
SPATA45
GBP3
PKDCC
SFRP1
EXOC1L
ACVR1
TLE3
CNPY2
SERHL2
LARP7
SNCG
MMRN2
FEM1B
CYP26A1
TXNDC16
GPR137C
RAPGEF3
SLC48A1
KCNN4
MRTO4
EMC1
ITPRID1
PLEKHF1
ARHGAP11A-SCG5
ARHGAP11A
LYPD1
METTL24
P2RX6
ARHGAP19
C9orf153
FRG2
SEH1L
FAM205A
ZFHX3
CADM3
SCMH1
RARB
FGF7
HOXB9
COLQ
GOLGA8N
GOLGA8H
ZNF3
COPS6
ZNF587B
SEC11C
EIF3D
PPFIA2
BNC2
TLE4
SMUG1
PPFIBP1
SHOX2
RSRC1
EYA1
GAS2
TMEM14B
RBM20
ZNF157
CNR1
R3HCC1L
TAF9
RAD17
AK6
ARHGAP42
SKIDA1
EVPL
PACRGL
PRTG
EGFLAM
ZGPAT
ARFRP1
PDK1
TAF12
PRR13
RPL7
RDH10
CDC42EP3
MXRA7
CFAP221
ARF1
ZBTB18
GPR19
GTF3C4
DDX31
GPR82
RPS29
LRR1
KRT24
MAGEB3
MAGEB2
PGPEP1L
TRPS1
TNP1
HES1
TYRO3
NT5C3A
FOXP1
ANKRD6
IL6ST
DMBT1
TMEM9
ZBED5
JUP
SLC22A5
SNX16
ERCC1
PKIG
SERINC3
UBL4B
SCHIP1
RARA
POLDIP3
FOXP2
NEBL
RPS24
POLR3A
RERG
MXD1
SRP9
FXYD2
DSCAML1
ZP3
ZBTB8OS
RBBP4
TEPSIN
NDUFAF8
RNASEH2B
CPA2
ASB15
HOXC5
SORBS2
CFLAR
CCNDBP1
SLCO2B1
ABCC9
RPS4Y1
TAL2
EMP1
KIF4B
TMEM107
TCF7L2
FGA
COPRS
GLS2
TPBGL
CREB5
OSBP2
COLEC12
CDH15
C4orf54
TPM1
CDH18
GNG2
FSIP1
JCAD
SPIRE1
PKNOX1
GK2
SKIL
ZNF585B
ZNF383
SYCP2
PPP1R3D
FAM217B
FLRT3
NDUFV2
TMSB4Y
ZNF397
RAB30
GUCY1A1
MYLK3
ATP1A1
ZNF367
FBXO34
ACY3
CDC73
DCAF4L2
CCDC73
SLC9A3R1
RAB37
SPTBN1
CDH3
XPR1
DCAF4
MAGEA11
CACYBP
NKX2-6
ID2
PAM
RPLP1
KDM3A
GATA6
KCNJ3
AKR1B15
SLC17A4
USP17L21
USP17L20
USP17L12
USP17L22
CPHXL
TFPI
AKAP13
PHLDB2
SOX5
ITGA3
ANKRD20A1
SPECC1L
RPN1
CS
SALL4
GABRB2
CSRNP3
PRICKLE1
PEDS1-UBE2V1
PEDS1
EPHA8
MYPN
SYNE2
HOXD3
TTI2
GFRA3
CD96
PGLYRP1
IGFL4
KLF9
KCNIP2
SPDL1
HOXA6
FAM72C
SRGAP2B
FAM72D
CYP51A1
SEBOX
SIGLEC15
NNMT
VTN
SARM1
TBX4
CNTN1
SMIM14
CEMIP
SNAPC1
CACNA1D
IL23R
SACM1L
NR4A2
KCTD7
PDZRN3
PDGFRA
ASXL3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
STX11
ITM2C
CCDC59
ZNF214
NLRP14
ANAPC15
EMILIN2
PLCH2
RND3
GDPD5
PMFBP1
SLC2A9
GC
TXNRD1
GORAB
SVOPL
COPZ1
USP34
HLTF
CDK15
HNRNPD
REC8
VSIR
MGST2
CCDC200
IRS2
CDIN1
TLE2
HOXB8
HOXB7
TYRP1
BTBD16
STRA6
PPIC
SMIM28
CSNK2A3
EIF2S3
SMURF1
GPR20
RNF111
COMMD8
POLR2D
APBB1
TUBB
MDC1
COL5A2
VANGL2
RASSF4
EXPH5
PDHX
APIP
MIDEAS
ENTPD4
SH3RF2
WDR82
GLYCTK
NRP2
NME1-NME2
NME1
MROH7
NQO2
CEP70
TBX18
PLA2G2E
CTNNB1
SLITRK6
METTL7A
ALKBH5
EFNA5
FGF8
NPM3
TGM2
GADD45GIP1
KCNIP4
CALM2
TSSC4
EVX2
C1orf105
NECTIN1
CBX5
PIGC
BOD1L2
PLN
ELAPOR2
ZNF746
SPRY1
BDP1
CAPN7
NDRG4
EDNRB
CACNG4
IGF2BP3
KRT18
GARRE1
UNKL
C16orf91
C12orf50
C12orf29
CRKL
PDE7A
ALG10B
CCN2
WDFY3
IL1RAPL1
ACVRL1
CACHD1
LRRC36
SLC25A6
TENM3
NDUFB3
FAM126B
ANP32C
FBXO40
MMP28
CLDN14
DNHD1
SLC25A30
SAMD11
SLC7A5
ADRB3
FZD8
CLIP3
ID3
YWHAZ
MMD
ST7
RAPGEF2
HEY2
FZD2
CPPED1
DUSP9
APP
CHST9
DNAJB4
TEX19
HMGCS2
LIPC
NPHP3
DPP10
ECHDC1
CACNG1
OPA3
C3orf52
DAZAP1
MRPL52
SLC7A7
CDX2
SOST
NOL4L
OTUD4
SPRED2
MS4A4A
IRAK3
FYN
PARD6B
MEGF6
CARD10
TNFAIP8
THRA
MRPL39
TRIM65
MRPL38
SEMA3E
NFIB
RNASE9
HOXB6
AMOT
MPPED2
BRD3
CD74
LCA5
ASB6
ZSWIM1
SPATA25
NEURL2
CTSA
AGBL3
SPRR2F
PCDH15
ESRRG
CDK20
RBMS3
KANK1
MLIP
GPC3
NELL2
TLL1
TNRC18
IER5
SMAD7
LOC100129484
SEPTIN9
TCF4
PRR5
HOXA7
HOXA9
ZNF644
PRR5-ARHGAP8
HMCN2
ETV1
KLF12
DZIP3
CIP2A
HSPA6
MCF2
LDLRAD4
AHNAK
RAPGEFL1
CD177
SMAD3
SFXN3
PDZD7
SH3BP4
RCOR1
HAPLN1
C6orf132
FAM81B
COL3A1
EAPP
PPP1R12A
RIPOR2
TMEM185A
GTF2H5
MAPRE3
CD28
LRIG3
TIGD4
ARFIP1
IKZF4
RBP1
PKIA
ABLIM3
FBXL4
SIPA1L1
NR2F2
CSNK1A1
IGFL2
FHL1
INPP4B
PLEK2
RAPGEF4
DCN
NHS
SHMT2
RBM18
MRRF
PCBD2
TNFRSF19
MCF2L2
MPDZ
CXXC5
SRI
CCND2
UBE2I
RPS10-NUDT3
RPS10
HMX2
BUB3
XRCC5
SLC5A10
SPRED1
MSX2
PHC2
NAGLU
KCNJ14
GRWD1
GDF11
DUSP6
BNIP2
FAM131B
ZYX
PFKFB3
BHLHA9
CCP110
SH2B1
LMOD1
NRG2
MGAT1
SYNDIG1L
H2BC5
H1-4
CD93
GFRA1
IL19
KRTAP13-1
FAM83F
AK2
TRIM24
LSM6
C6orf163
MCM5
NEDD4L
CSDC2
KLHL2
KBTBD8
KIF2C
ARSF
FAM89A
FHL2
ZSWIM6
DISP1
USP17L13
USP17L17
USP17L15
SSBP3
KCNMA1
CFAP69
HTR1F
EPN2
ARHGAP8
LIG4
ABHD13
STARD13
PPP2R5B
ATG2A
BARHL2
PGF
SOAT2
IGFBP6
CECR2
SLBP
SHLD1
PTGIS
KMT2A
DHRS3
ANKRD33B
SMTNL2
ALX1
EFNB2
XKR7
ANK3
SRGAP2
FAM72A
PSPH
CCT6A
ZNF703
MAML3
RAP2C
FAT2
DHTKD1
SPATA13
OR6V1
BCL11B
CDA
TLCD4
NKX2-5
SYBU
GPC6
PKP2
DMBX1
ATP1B1
ZBTB40
DST
SRRM3
KIRREL1
ANKK1
GTF3A
NEK1
CLCN3
MT1E
LRRC8D
NME4
MYOM2
PGAP6
ATP2A1
FGB
DMRT3
RANGAP1
DLAT
ZNF77
RBM25
VIM
PRRT4
KRT20
COMMD10
OLFML2B
MUSK
SPIN1
PCDH18
PDCL3
DERL3
SCOC
JADE1
SNX8
ANKS1B
UGT2A3
PSMB5
USP17L11
USP17L18
USP17L10
LRIG1
ITPRIP
SLC30A4
TAS2R9
TAS2R8
TAS2R7
CRY1
ZNF611
TTC24
IQGAP3
SNTN
FABP2
TPRG1L
DNAH12
OVCH2
SYNPO
USP2
TBC1D5
WDR26
FGD5
UGT2B11
DLG2
STOM
UBE2H
SDCBP
RARG
YTHDF2
SLC25A25
NINL
AADACL4
CBFA2T2
OTUD7B
ZNF341
H2BC17
H2AC17
H3C12
CRK
SNX10
SYNJ2BP-COX16
SYNJ2BP
SATB2
MID1
SVEP1
SLC18A1
RNF150
ZNF813
LIG3
TBC1D9
SASH1