ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584305 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◣ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NEUROG2
ZNF335
ZP4
RABL2B
MAPKAPK5
PSMD1
DUX4
IPO13
RABL2A
NME6
VEZT
FGD6
HES1
NEUROG3
RWDD1
ICMT
HES3
CACTIN
VDAC2
TAOK3
SUDS3
NUP85
ZNF503
POLR3F
DZANK1
MBTPS1
HSPA9
IGFBP2
DUSP29
RPL21
ATP5MG
DYNC1LI2
NVL
VTI1B
TBCK
AIMP1
FAM187A
EFTUD2
CCDC103
LOC102724770
DGCR6
ARHGAP10
PAK1IP1
C6orf52
DCTN1
NNAT
BLCAP
NUP205
POLR2E
GPX4
ACTR10
SRD5A1
REXO1
SKP1
CDX2
DPH6
PMAIP1
C19orf48
S1PR4
NCLN
STAM2
PSMG2
CEP76
EXOSC5
BCKDHA
UPF2
STAM
MRPS7
MIF4GD
GGA3
FRG2C
SLC35B1
PES1
PNO1
HADHB
HADHA
TSN
GOSR2
GLRA1
URM1
SUPV3L1
INSM1
RBBP5
LYRM4
FARS2
FARSB
SEC61B
ALG2
ANAPC7
WNT1
CAPRIN1
ZNF576
IRGQ
SKIL
RPL35A
IQCG
LMLN
RBKS
BABAM2
ZDHHC1
LARP7
LZTS1
PCBP1
PSMD12
TSNAX
TMED1
NHS
MRPS5
ATOH1
SART3
ISCU
GOLGA5
ZNF608
VARS1
NDUFA4
SF3B3
COG4
ICE1
COX7A2L
TTC8
ARF1
SFI1
EIF4ENIF1
PDAP1
BUD31
PAF1
RPS12
RPS23
ATP6AP1L
SMC2
BNIP3
PI4KB
IL17RD
PIP4P1
OSGEP
APEX1
RBBP7
MALRD1
GADD45G
PANK4
HES5
USP1
ZRANB2
HOXA3
HOXA4
NAV3
TM9SF1
IPO4
TSSK4
NEUROG1
LEFTY2
HSPA1B
DUSP6
TTYH1
KDM8
FAM104A
C17orf80
PPP1R1B
TESC
RPS27A
CLHC1
SELENOF
HS2ST1
CERCAM
NFKBIL1
DDX39B
ATP6V1G2
CCDC33
UFM1
XPNPEP3
ST13
DNAJB7
PRRX1
G6PC2
SERINC5
UBE2I
FAM222A
PAX6
ADK
AP3M1
FZD8
RPS29
LRR1
ST18
B3GALT5
PTGES2
CPSF4L
NRXN2
RABGGTB
PLAGL1
DLL4
PHOX2B
PROSER1
NHLRC3
PDHB
ETS1
CR1L
HOXB1
NEUROD1
HOXB3
HOXB4
TMEM212
ADNP2
ASXL3
FRG2
BICRA
HHIP
OR10AC1
C6orf47
BAG6
APOM
PNKD
NCOA7
RASL10B
TLE2
ITGB6
LHPP
HNRNPA2B1
CBX3
RAB11FIP1
PIN4
TRABD2B
SULF1
FKBP1A
NOXO1
SYNGR3
GFER
TAF9
RAD17
AK6
GTF3A
CNTN1
NUTM2D
NEDD9
ERRFI1
RYBP
STRA6
PDPN
SLC10A2
PDE6B
MRTO4
EMC1
DDX3X
SEC11C
UNCX
GUCY1A1
MYRIP
PSMB5
OPLAH
SOX12
RGS12
HOXD3
HOXD4
EPHA5
TMEM120B
DLX4
STK36
RNF25
CSRNP1
CBFA2T2
ARHGAP11A-SCG5
ARHGAP11A
RIMKLB
NEK3
PAH
ASCL1
KAZALD1
OR6B2
NDUFA10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRUNE2
BFSP1
ME3
LIMCH1
METTL11B
NR2F1
COMMD1
CCT4
RHBDD3
EWSR1
GADD45GIP1
KDM2B
LRATD2
SCGB1A1
ZFX
BANK1
CNTN4
HES7
ALOXE3
RPN1
PDHX
APIP
TPRA1
MCM2
FJX1
CDCA7
TTLL6
KRT16
SCARB1
TLE4
LPIN1
HNF1A
OTX1
GFRA3
CACNA1D
RPH3A
EIF2S3
SYBU
TIGD1
EIF4E2
ABCB5
SCARF2
COL17A1
SPACA1
TMEM107
KIF26A
RAI14
PCBD2
ZGPAT
ARFRP1
OAZ3
MRPL9
BRWD1
WDR59
CNPY2
UPF3A
LRIG1
CLGN
GDNF
SOX11
RPL7
RDH10
SUCLG1
MBNL3
CRYAA
CRYAA2
ANKLE2
PDGFA
KCNN4
TCF7L2
LBX1
REV3L
PPP1R1A
SOCS3
CLDN2
MDFIC
HOXA2
LAMA4
CDC73
DMBX1
RARA
AXDND1
HNRNPD
GPR20
PKNOX2
ARID3C
DCTN3
CALCOCO1
ECEL1
REC8
C6orf132
WBP1L
TBC1D8
MAFA
ZMAT4
SALL1
TNC
CLMP
GTF3C4
DDX31
DDAH1
CCN1
EHF
DHRS3
ZNF585B
ZNF383
BAHCC1
ERLIN2
NID1
CAMTA1
PDE12
CXCL12
CCDC200
HOXB8
HOXB7
HOXB6
FXYD2
NOTCH2
DSCAML1
ECM1
HOXA1
AQP6
DBX1
SNAPC1
CATSPERG
LIN28B
TMSB15B
CDX1
GORAB
BAIAP2
FGFR4
TPH2
MSX2
IRX5
ZNF214
NLRP14
ALDH1A2
MAST2
XIAP
SLC45A3
VOPP1
C15orf61
CPN2
RADIL
ANK2
SLC39A6
PPM1B
PRDM12
AMD1
DIPK1B
ZADH2
TSHZ1
KIF21B
GPR176
RBPJ
METTL24
NFILZ
FAM214B
STOML2
PIGO
ADAMTS15
C8orf34
CD99L2
H2BU1
H2AW
TMEM131L
LRRC4
CDH18
USP17L21
USP17L20
USP17L12
USP17L22
LIG3
ZNF703
TMPPE
GLB1
FOXB1
CDC42EP2
CD82
BAZ2B
CYP26A1
PACSIN2
TRIM56
ZSWIM6
PIPOX
CADM3
QPRT
LOXL4
ZNF746
ID2
TPM1
GAD2
ABLIM3
KDM6B
KLF17
FABP7
MYLK4
SCN5A
CPLX1
EBF3
OR8J1
DHX32
HMGN1
TBX3
RFX2
CUEDC1
POU3F2
HOXA5
SOX21
HOXA6
TEAD1
LRRC15
FAM107A
DST
RPL24
RPS10-NUDT3
RPS10
RPS24
POLR3A
SCARF1
RILP
SLC22A2
ZFP36L2
FOXA2
FABP5
DEFA5
LZTFL1
ONECUT2
FGF19
HNRNPA3
PDPK1
CEMP1
ERCC1
PFKP
ADO
TEX30
SYNE4
LOC101927572
ALKBH6
CPVL
CHN2
EIF4H
KLHDC8A
LINGO1
SLC7A5
MSX1
ALKBH5
SOX6
MTCH2
RNF138
FBLN1
HSPA1L
HSPA1A
JAKMIP1
LHX2
ZFHX4
ACSS3
DTX4
ADGRL2
NAV2
SMC6
GEN1
NEBL
PPP1R35
ZCWPW1
MEPCE
TRAP1
TBL1XR1
OTOF
FAM166C
YAP1
EIF2S1
ATP6V1D
SPCS1
GLT8D1
ARHGAP24
SALL4
METRN
ANTKMT
CCDC78
ZNF775
KIAA0895
MSI1
KLF6
MUC20
RUNX1T1
FAM171A2
GREB1
ID3
TLE1
GZMK
PHC2
KCNIP4
HOOK2
SPOCK2
KMT2A
HOXA7
PAX3
CST6
EFNA5
CATSPER1
ITPRIP
FRMD7
CYP51A1
H3-3A
KMT2B
NUP210
TDG
C12orf73
TPST2
PPP2R5A
C6orf226
DAAM1
C8B
STMN1
MEX3B
ADAMTS18
KRT20
OLFML2A
NR6A1
RPRM
BBS9
TLE3
HEY1
LDHB
CNKSR3
HOXC4
MUSTN1
ITIH4
KLHL15
PIGR
MEIS3
EBF2
DAPL1
STK38
DHRS4L1
HSPB8
C5orf63
CASC3
LEMD2
CLDN11
THEMIS
SRGAP3
RHBDL3
PPFIBP2
SEMA6D
EIF4E3
SNCG
MMRN2
TMA16
KEAP1
NMNAT2
PON2
DNAJC25-GNG10
DNAJC25
ZFHX2
HOXD1
TUBB3
MC1R
TFDP2
PAX4
TGFBI
ACOT2
FEZF2
CA4
ADM
HOXC6
HOXC5
CS
LRRC10B
MEF2C
SERPING1
TPCN1
FGF2
CCBE1
TMEM70
ELOC
FBXO10
MEIS2
ALOX5AP
GNAI1
TMEM14A
PCDH11Y
TCF20
IL37
SRSF11
LRRC40
PARP16
TANC1
USP17L13
ENO1
USP17L11
USP17L18
USP17L10
HOXB9
CER1
RARB
LIN28A
NKIRAS1
NR1D2
TAGLN3
LAPTM4A
IFI16
PYDC5
MNT
TCF4
CEP97
R3HDM4
MEOX1
FABP9
RPL17-C18orf32
RPL17
ATP1A4
ZFHX3
TYRO3
HOXA9
MARCHF7
TP53I11
FOXP1
SP5
SPG7
PCBP4
RFX3
GPR62
C1orf141
BNIP2
USH1C
OTOG
ME2
IFNA21
ELMO1
PANK2
PCDH18
RGS16
LDLRAD3
CSTF2T
SEMA4B
IP6K3
ERI1
HRK
OLFM2
LYPD6B
LCA5
PLEKHA6
SCN2A
MRPL3
FOXD1
N4BP3
BTF3
EOMES
CRTAM
SEMA4F
M1AP
ABAT
NUTM2F
STARD13
GAS8
NELFA
GPR157
SLC25A33
TTC13
RBP1
PJA2
PALM2AKAP2
S100A10
UNKL
SOAT2
IGFBP6
CDCA7L
C16orf91
SP2
CITED2
ARID3B
FOXP2
MAB21L2
NFE2
ID1
GATA4
GPR108
MTRNR2L2
MSH3
DHFR
TRIM65
MRPL38
NFIA
TRIP10
SMPDL3A
CCNDBP1
POP5
GRSF1
IL23R
ARSG
PDE4DIP
EXOC2
SPATC1L
DMRT3
MTRNR2L1
RPL34
MRPL34
DDA1
ABHD8
ZNF652
SH3BP2
RASSF2
IER3
FLOT1
PARP11
EVA1A
NDUFS7
SH2B1
INAFM2
BRINP1
FGR
PKDCC
METTL3
SH3BP1
PLEKHO2
MBD2
CBX4
RNF149
PDP2
TAF12
LYL1
HIP1
PRDM6
MVB12A
KAT6B
HUS1
MTRNR2L8
CMTM7
HEXIM2
ETFBKMT
ARID5A
ABCG2
SEC14L1
NEO1
EAPP
KCNAB2
JAK3
PDZRN3
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
FBXL18
VIP
CHODL
FRAT2
RPS6KA1
SASH3
NRROS
C11orf24
MRS2
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
KMT2E
NCOR2
KDM3A
GRHL3
PRDM10
UBXN10
PLA2G2C
RASA4
PAX8
CCDC88A
SPECC1
RASL12
KBTBD13
LYPD1
ARHGEF10L
NADK
ACTB
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
DGKZ
WDR6
HAND1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
NKD1
ING1
CARS2
EFHD2
FAM110A
KITLG
OTUD7B
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
SMURF1
CCDC114
NEK7
GGCT
CD79A
ZNF76
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
HOXC8
VAV1
SH2D3A
KHDRBS1
MXI1
SLC2A9
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
ZNF367
DIAPH3
CNOT2
IMPG1
POLD2
CBFA2T3
GATA6
ZCCHC3
CCKAR
C20orf96
ASB6
NFKBIA
IQCH
DMD
CRABP2
AAGAB
RXRA
ZNF414
LDLRAP1
ZFYVE28
CFAP99
CD38
INAVA
BCL3
BNC2
SKI
HEBP2
TRERF1
CMTR1
HOXB5
TUBB
RAC2
MDC1
LRIG3
FTL
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
SYNPO
POLR2J3
GPAA1
EXOSC4
RNASEH2B
MINDY2
SCAMP4
NDRG1
ADAT3
SMARCA2
MYO1G
NTRK2
CREB5
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
MYO1B
H6PD
PPIB
PTK2B
DISP2
ARHGEF1
TNFRSF19
RAB11B
NDFIP2