ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◣ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
DUX4
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
PSMG2
CEP76
IPO13
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
S1PR4
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
RPL21
POLR2E
GPX4
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
MIF4GD
GGA3
HSPA9
ID2
FRG2C
HOXA1
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
GOSR2
S100A10
VARS1
BBS9
MRPS5
ZNF576
IRGQ
UPF2
RARB
TSN
PAK1IP1
C6orf52
PSMD12
RPS23
ATP6AP1L
DPH6
PDE6B
ATP5MG
DAPL1
GOLGA5
CAPRIN1
SFI1
EIF4ENIF1
C19orf48
RPL35A
IQCG
LMLN
SEC61B
ALG2
SMC2
TTC8
PES1
RBKS
BABAM2
SOAT2
IGFBP6
NNAT
BLCAP
TM9SF1
IPO4
TSSK4
COMMD1
CCT4
COX7A2L
PI4KB
RBBP5
ACTR10
PNO1
TMED1
SUPV3L1
NDUFA4
USP1
ZRANB2
SART3
ISCU
PKDCC
RBPJ
LYPD1
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
PIP4P1
OSGEP
APEX1
NFIA
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
XPNPEP3
ST13
DNAJB7
PPP1R1B
IL23R
UFM1
SLC22A2
ZFHX3
FRG2
PROSER1
NHLRC3
RPS27A
CLHC1
SYBU
LOC102724770
DGCR6
CLGN
CBX4
HSPA1B
PCBP1
SCNN1A
LTBR
RPS12
PTK2B
C12orf50
C12orf29
ZGPAT
ARFRP1
ZNF608
LRRN4
CDC42EP3
CYP26A1
CREB5
MAGEA11
NEO1
PTGES2
METTL24
OPA3
SF3B3
COG4
PAF1
FOXP2
PXDNL
CCDC33
KCNN4
NSUN6
ARL5B
TLE2
PDE12
VANGL2
KCNIP4
BARHL2
CITED2
C6orf47
BAG6
APOM
MEOX1
NR2F1
USP29
HMGCS2
HEXIM2
RBMS3
CECR2
HOXB1
GATA4
GABRB2
MYRIP
CCNDBP1
HEY2
MRTO4
EMC1
SIRT4
GADD45GIP1
VIP
MBD2
OR6B2
NDUFA10
METTL3
SALL2
OTUD7B
RBFOX1
EIF2S3
ZFHX4
SCMH1
ACOT2
STON1-GTF2A1L
MTRNR2L1
RPS29
LRR1
SLC30A4
HBD
HBB
ST7
BANP
CA5A
ZNF585B
ZNF383
MSX2
DIAPH3
PDK1
ZNF746
POP5
ELF3
SUCLG1
ARHGEF10L
LAMA3
NEBL
HES1
CABIN1
CDC73
STIL
SEMA3E
TMCC1
ST18
ARHGEF38
TAAR2
SYNE2
TNK2
FAM118A
MAPK10
PDE4DIP
SKIL
NFKBIL1
DDX39B
ATP6V1G2
CCDC200
HMX2
BUB3
DMBX1
HAPLN1
LARP7
BNIP3
TPM1
RPL7
RDH10
TMEM107
LAMB1
EPHA8
HOXC6
HOXC4
HOXC8
HOXA3
HOXA4
PAH
ASCL1
HOXA5
CACYBP
TNRC18
PDHX
APIP
KAT6B
BHLHE40
TMEM9
GRHL1
MACROD2
CHODL
TBX2
SEC11C
ZBTB25
ZBTB1
LIN28A
RARA
TXNRD1
ANK3
FREM2
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
ZNF407
PIN4
IL12RB2
TBC1D9
ZNF652
GORAB
MVB12A
BST2
OAZ3
MRPL9
FOXP1
FMN1
TTI2
KIF16B
CDS1
PCBD2
LCLAT1
PCDH15
CPB1
SLC25A6
RPP25
SMAGP
MGP
PRUNE2
SERTAD2
CNPY2
MKRN2OS
MKRN2
GTDC1
ARAP2
ARHGEF3
BAMBI
PLD5
ITGB8
SPCS1
GLT8D1
USP44
ALKBH5
TMC7
GTF3C4
DDX31
ZNF367
TCP10L
NDUFB3
FAM126B
FRRS1
MET
CNR1
EPM2A
SHOX2
RSRC1
CXXC4
ATOH1
GPR108
TRIP10
ZNF827
ERFL
RPS10-NUDT3
RPS10
USP17L13
USP17L17
USP17L15
CLDN14
OAS1
NDUFS7
SHMT2
TAF9
RAD17
AK6
RPN1
LYPD6B
ARF1
METRN
ANTKMT
GFRA1
SMURF1
LRRFIP2
ATG4C
PDZRN3
LMOD1
NLGN1
TNFRSF19
AGO1
ZNF395
ANK1
C6orf163
ETFBKMT
ABCB4
SCML4
CCDC59
CLECL1
KDM3A
INKA2
IL20
DNHD1
SPAG17
HCAR3
HCAR2
BCAS1
RBM20
RARG
SSPN
ASXL3
DONSON
MYZAP
GCOM1
TIGD1
EIF4E2
TMEM242
EVX2
CDH18
TMEM70
ELOC
GABRA6
MNT
SCAMP2
CLNK
ATP1B1
BNIP2
ZNF341
SPIN1
GEMIN2
MIER1
DNAI4
TMEM106B
KDM2B
ACKR3
ELOVL5
PRTG
SALL3
ID1
COL23A1
KRTAP23-1
SLITRK6
DHRS3
RAB11FIP1
MRPL34
DDA1
ABHD8
MAGEB3
MAGEB2
B3GNT5
EIF3D
ATP13A3
MEIS2
EFNB2
ABLIM3
SNCG
MMRN2
MYO1B
PKIG
POGLUT3
DIPK1A
NDST3
DENR
SLC25A53
FAM199X
ZASP
SAP25
OTX1
HAND1
CFAP69
SCOC
STK36
RNF25
COMMD10
KMT2A
CADM3
PTCH1
MAPRE1
TMPRSS11F
RPS24
POLR3A
PRDM10
LIX1
MCU
TFAP2B
REC8
RUNX1T1
SOX14
PARD3B
UNC93A
GGA1
ELOVL6
ATXN2
PEX14
DFFA
LMO1
ARSF
ACOT1
TEX2
ITGAV
NEFH
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RPL22
RNF207
SEPTIN2
HDLBP
REL
IPMK
CISD1
ECEL1
BRWD1
OSGIN2
BDP1
ACSS3
IGF2BP3
COX5A
KAT6A
ANGPT1
NELFA
RABGAP1L
BCAT2
CTF1
BCL7C
SLAMF8
SYTL1
FGD3
BTNL9
SFRP2
UNKL
C16orf91
ZNF397
SEMA6D
NXPH4
USP34
APLN
MMD
RGS8
KDM6B
KMT2E
SHB
RIN2
LYPD6
STATH
ADM
KLRC3
UBE2I
TSPAN3
PLCH1
GJA10
MAB21L2
CALM2
H2BC5
H1-4
IL17B
C1orf105
ZBTB40
NKX2-6
PIGC
ABI2
ABAT
ZNF385B
DOT1L
AP3D1
LCA5
VPS33B
AFAP1
LOC389199
ARHGAP10
HUS1
RPLP1
LYN
ANAPC15
ADAMTSL4
ZADH2
TSHZ1
EOMES
PDHB
MYADM
TCF7
PRKD1
IGFBP2
SMARCD2
SVOPL
SIGLEC15
KLF5
RBBP8NL
CLDN9
CLDN6
DNMBP
ACOT6
ARID3C
DCTN3
SPATC1L
EMP3
DNAJB1
KCNK2
CCDC174
DACT2
ANKRD6
MLIP
ILF3
PHIP
ZNF507
BOD1L2
CS
PDE4D
YTHDF2
MRPL52
MIGA1
SLC7A7
IMMP1L
ELP4
SLC2A9
CRABP2
SIGIRR
THOC6
HCFC1R1
BICDL2
PHC2
PXMP2
POLE
TSC1
GFI1B
STX19
SRSF11
LRRC40
KANSL3
FER1L5
NRXN1
NKX1-1
ATXN1L
PHB2
NT5C2
KRT18
ACY3
TRPM7
PCLO
CPNE6
TPRA1
MCM2
CIPC
TACC1
ATXN7
EBAG9
IFI16
PYDC5
ZBTB17
STARD13
SSBP2
OTUD4
SYNJ2BP-COX16
SYNJ2BP
BEND7
NEK1
CLCN3
ZC2HC1C
ACYP1
RNF10
COQ5
GARRE1
HSPA4L
RYR2
RPL34
LMO4
ADGRL2
UFSP1
ACHE
DMAC1
FAT2
DUSP9
TBX3
EIF4H
GADD45A
PDCL3
LOC100287896
LIPT2
TMTC3
CEP290
CCL28
CTNNB1
KCNC3
DDAH1
CCN1
USP17L21
USP17L20
USP17L12
PAX6
USP17L22
MGST1
NR2C2
CBWD5
CBWD3
CBWD6
AMBN
HNRNPD
ZDHHC17
ACBD6
SERHL2
KANK1
RILPL1
ACTR3B
EXOC2
CDKL2
QPRT
ZNF157
FAM168B
RPRM
POU2F1
VPS26C
DLAT
TMSB4Y
SATB2
TMPRSS12
SH2B1
HNRNPA2B1
CBX3
MTF2
VSIR
UROS
BCCIP
ANO1
NBEA
MAB21L1
FGD5
VEPH1
CYP51A1
PRKAG2
CDK20
SLC40A1
TLE4
DAG1
COL21A1
GTF2IRD2B
KCNH1
NEUROG1
PPFIBP2
SORBS2
TANC2
HOXD3
LSM8
YEATS2
SMUG1
SLC10A5
IMPA1
TAP1
PSMB9
TMEM259
CNN2
PRR13
MELTF
KLHL32
SELENOS
PLOD2
KCNS3
TMPPE
GLB1
RASSF4
BICRA
GOLIM4
TIPIN
MEMO1
GPRC5A
CEP70
EML5
BCAS2
TCHP
CCNC
JAK1
FANCL
RASSF6
RALB
BAG2
KCNN2
MTMR10
GRIN2C
RTL6
FZD8
URM1
POLR2J3
TAF1A
C2CD5
GGH
PCTP
STX18
PEX2
NCBP3
PRXL2A
NRDE2
ZNF3
COPS6
MTMR2
MPP5
CHD7
TMEM270
METTL27
PTGES3
DIO2
SFT2D2
PSMB5
CCDC102A
ADGRG5
CNOT10
ZEB2
RFPL1
PXYLP1
UBE2V2
TNS3
ZBED9
SNX3
TCF4
RAB11FIP3
BIRC6
EID2B
EID2
GPR37
ID3
FRMD7
SPECC1
PHACTR2
ARHGAP17
SPRR2F
EPHA6
NEUROG2
PIP4K2B
CYB561D1
ATXN7L2
RIMS1
SLC5A10
PALLD
SULF1
LOC102723360
EYA1
FILIP1L
PARP4
CMSS1
USP12
SLC36A4
LMNTD1
PPP1R12B
HMGA1
PLIN2
COLEC12
TSHZ2
FAM110A
SND1
PLEKHD1
NEK3
C6orf136
RAB11FIP2
TAF12
CMTR1
ZNF384
FRMD4A
TPCN1
TBC1D5
PLS1
RTN4IP1
QRSL1
CAPZA2
BCAP29
SULT1A1
RYBP
ABHD12
TTK
EFCAB2
GINS1
ARHGEF5
OTOL1
USP17L11
USP17L18
USP17L10
SPP1
GATA6
IFT22
SCAP
VWA8
PELI2
ZNF697
LRRTM4
SBF2
RAI14
PPP2R5A
ZSCAN12
PPP1R13B
CRPPA
INPP5A
TXNDC11
CATSPERG
KMT5C
EXPH5
HMCN2
DRAM1
NTAN1
ARL14EP
NUTM2E
EIF5
TMEM167B
FAM162A
CCDC58
MRPS36
PIGU
SRSF10
OR5A2
ERCC6L2
WDR11
CEP41
FDFT1
CARD10
SEMA4B
RHOBTB1
CA12
PIK3R1
NR2F6
FSTL3
C15orf61
ADAMTS7
RAPGEF3
SLC48A1
KIF22
ZG16
EAPP
NR2C1
MARCHF6
CRKL
ANKRD36C
MGST2
JMJD1C
GDF6
ATP6V0A4
NT5DC3
RPS5
NEUROG3
WNT1
DUSP29
ICMT
HES3
MBTPS1
CDX2
VEZT
FGD6
G6PC2
PMAIP1
ZP4
SERINC5
PALM2AKAP2
PLAGL1
GLRA1
LBX1
LZTS1
NEUROD1
DUSP6
INSM1
LEFTY2
ETS1
NHS
ADNP2
RHBDD3
EWSR1
HOXB3
CALCOCO1
FXYD2
MUC20
CDCA7L
ITGB6
DLL4
PHOX2B
SP2
TMEM120B
ANKLE2
UNCX
DLX4
PRRX1
MSX1
FABP7
SP5
CERCAM
MYLK4
ARID3B
ANK2
FGF19
NOTCH2
NFE2
LRATD2
NAV3
TLE3
ME3
FAM222A
CNTN1
RGS12
MALRD1
CBFA2T2
MTRNR2L2
MSH3
DHFR
TRIM65
MRPL38
DSCAML1
ERRFI1
RBBP7
SMPDL3A
GADD45G
MRPL3
GRSF1
HOXB4