ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◣ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
POLR3F
DZANK1
IPO13
DYNC1LI2
CACTIN
FAM187A
EFTUD2
CCDC103
NME6
NUP205
MAPKAPK5
NEUROG3
PSMG2
CEP76
TAOK3
SUDS3
RPL21
NUP85
MRPS7
MIF4GD
GGA3
VDAC2
NVL
HSPA9
DCTN1
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
RBKS
BABAM2
POLR2E
GPX4
ATP5MG
C19orf48
SEC61B
ALG2
PAK1IP1
C6orf52
SMC2
EXOSC5
BCKDHA
SRD5A1
ZNF576
IRGQ
ACTR10
MRPS5
DUX4
S1PR4
NCLN
TMED1
SLC35B1
COX7A2L
TTC8
TSN
PI4KB
NEUROG1
PNO1
FARSB
PDAP1
BUD31
LYRM4
FARS2
GOLGA5
PDE6B
ADK
AP3M1
PES1
NNAT
BLCAP
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
RPL35A
IQCG
LMLN
RPS23
ATP6AP1L
SFI1
EIF4ENIF1
ZNF503
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
IPO4
TSSK4
SELENOF
HS2ST1
RBBP5
CDX2
SART3
ISCU
NDUFA4
USP1
NEUROD1
HSPA1B
ANAPC7
DUSP29
PSMD12
IL23R
ICE1
CDCA7L
UFM1
FRG2C
PCBP1
TMEM70
ELOC
C6orf47
BAG6
APOM
PROSER1
NHLRC3
PIP4P1
OSGEP
APEX1
DLL4
ZNF652
PAF1
MYRIP
SF3B3
COG4
ATOH1
DLX4
RABGGTB
ECEL1
XPNPEP3
ST13
DNAJB7
ST18
INSM1
PTGES2
CABIN1
RPS12
PIN4
VEZT
FGD6
ZGPAT
ARFRP1
RPS29
LRR1
FRG2
OR6B2
NDUFA10
RPS27A
CLHC1
PALM2AKAP2
EIF2S3
RBPJ
NFKBIL1
DDX39B
ATP6V1G2
STIL
HES1
GALNT10
BNIP3
POP5
LOC102724770
DGCR6
GADD45GIP1
RBL2
RPL7
RDH10
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
DNAJB8
PCBD2
LPIN1
GPR108
TRIP10
DTNB
ID3
ZNF746
H2BU1
H2AW
MRS2
RAB11B
WDR6
ANKLE2
NEUROG2
SHB
MBTPS1
GADD45G
MRTO4
EMC1
ANKRD1
ACOT2
PAH
ASCL1
PDE12
SEC11C
UNCX
STK36
RNF25
PRUNE2
DAPL1
FGFRL1
ZNF664-RFLNA
ZNF664
CCDC92
CCNDBP1
PDHX
APIP
FZD8
GBX1
LEFTY2
PMAIP1
HESX1
MAGEA11
MSX2
CCDC33
TLE2
SKIL
RYBP
NFE2
EHF
AXDND1
CNTLN
GTF3C4
DDX31
ARHGAP11A-SCG5
ARHGAP11A
KHDRBS1
NKIRAS1
NR1D2
APLN
SLC25A6
ZNF704
LARP7
ALKBH5
TPRA1
MCM2
ZNF585B
ZNF383
SUCLG1
KCNN4
PLA1A
MBNL2
MSX1
FRAT2
RPN1
FOXC1
NXPH4
SPIN1
OPA3
DUSP6
ZNF649
SCIMP
ARHGEF38
MUC20
MAL
TIGD1
EIF4E2
PAX8
CDC73
MAST2
ID2
ACOT1
CDH18
GABRB2
TLE3
RARA
LIG3
PHACTR2
SYT12
TVP23C
UBE2I
FAM151B
SPCS1
GLT8D1
CNTN4
ZNF608
LYPD6B
OAZ3
MRPL9
TRPM3
UPF3A
DOT1L
AP3D1
CECR2
CCDC200
SRSF11
LRRC40
GSR
MEOX1
CCDC102A
S100A10
CNPY2
LIN28A
TMEM242
RAN
RTL10
GNB1L
FOXP1
METTL24
SKOR1
LMO4
FTL
BAX
BFSP1
GC
CERKL
TPM1
HOXB9
MELTF
KDM6B
RARB
LHX2
NKX2-6
RIMS1
ASB6
NEFH
MIER1
DNAI4
ATG10
RUNX1T1
BCAT2
RAD54L2
RSPO4
RBBP7
SYTL1
OTX1
KCNK2
TCP10L
METRN
ANTKMT
TMPRSS7
CDX1
B3GNT4
USP17L21
USP17L20
USP17L12
USP17L22
USP17L11
USP17L19
KRTAP2-3
KRTAP2-2
KRTAP2-1
KRTAP1-1
AP1B1
CALM2
TMEM275
DMBX1
PRSS22
PDHB
PRSS47
NTNG2
GSX1
CYP26A1
CBX4
TULP1
TBC1D8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMPPE
GLB1
SLC39A7
RXRB
HSD17B8
COL11A2
SYNJ2
MINK1
DUSP4
TAP1
PSMB9
SLC22A24
GATA4
LCOR
INKA2
PKDCC
MKRN2OS
MKRN2
KAT6B
RPS10-NUDT3
RPS10
KCNIP4
NKX2-3
UBXN11
CD52
VIP
KIF21B
HOXB1
BUB1B
AZIN1
BRWD3
MTCH2
FAM118A
BANP
CA5A
ADM
APBB1IP
CLEC10A
ZNF850
USP17L18
USP17L17
PHLDB2
C15orf61
DUSP14
FBXO32
SOWAHA
SHROOM1
CCDC174
NAGLU
SLIT1
C5orf63
DDX3X
WNT1
KRT18
TNFRSF19
ELF3
PCLO
OTP
MNT
SDK1
PPL
HOXA3
HOXA2
ST6GALNAC3
COCH
KAZALD1
CCND3
ACKR3
ZNF444
FRMD7
SERTAD2
LPCAT3
SDF4
B3GALT6
BCOR
SMARCA4
C1QTNF12
TRIM65
MRPL38
KMT5A
BICRA
GTF3A
SNX1
CIAO2A
RPL22
RNF207
EFEMP1
CPVL
CHN2
CADM3
STRADA
FOXP2
SEC22B
GRHL2
KLF17
SNRPA
C19orf54
SNAPC1
LYPD1
EIF4H
MLH1
EPM2AIP1
NRDE2
IRX4
OTUD7B
RPGRIP1
CDC42EP1
LGALS2
UNKL
C16orf91
RAB17
SOAT2
IGFBP6
SLC4A8
GALNT6
RBM26
LEKR1
HNRNPD
ZFP37
TSPEAR
KRTAP10-12
MEF2B
ZNF891
ZNF10
SEPTIN2
HDLBP
SMAGP
TCF7
MTRNR2L1
TEAD3
UROD
HECTD3
REC8
TRIM46
KRTCAP2
SCAMP4
ADAT3
PNPLA1
NCOA2
ZMIZ2
SMAD7
H3-3A
KMT5C
SSPN
RNF32
PCDH8
CNR1
MYSM1
TMEM88B
ANKRD65
PLEKHA6
CLDN9
TCHP
CLDN6
SLC30A4
CPB1
KCNJ4
CLDN15
FIS1
TACC1
VENTX
UTF1
CNPY3
JAKMIP1
WNT3
PTCRA
SYBU
COL23A1
ZSWIM1
SPATA25
NEURL2
CTSA
ZNF395
ATP6V0A4
SYTL3
DYNLT1
ZNF436
FEZF2
MACROH2A1
TIPIN
AQP7
JAK1
HOOK2
TTC13
NR2C1
TAS2R9
TAS2R8
TAS2R7
MACF1
PTPRF
RPS24
POLR3A
USP17L13
USP17L10
UBXN7
ZNF397
USP17L15
TMPRSS4
SMIM35
HOXA1
METTL11B
PCTP
JUP
BRWD1
SEMA6D
PDPK1
CEMP1
FAM53B
PCDHAC1
CD24
USP44
PTCH1
AGO1
GATA3
SYNE2
ABAT
RHOBTB2
PPCDC
STX18
AHSP
SUSD3
MARVELD3
KCNB1
KMT2A
NRG1
SH2B1
EOMES
CDS1
PPP1R1B
IL12RB2
NEUROD2
PEX14
DFFA
CFC1
CYBRD1
KRTAP12-1
CA12
ARF1
PLAGL1
SERPINF1
MECOM
PPP1R35
ZCWPW1
MEPCE
ZBTB40
IL17RD
RUSC2
ATG9B
ABCB8
CAV3
ESRRG
STON1-GTF2A1L
CLEC4G
SNCG
MMRN2
COX5A
RPEL1
BEND4
OR51T1
PHB2
FBXL4
TMEM167B
SERTAD3
MAPRE1
MAPK12
SOD2
ACAT2
CERS2
ANXA9
GYG2
URM1
TMEM259
CNN2
AEN
KCNN2
LIPC
EVC
EVC2
PIK3R3
SH3YL1
ACP1
KCNS3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
AKAP10
HINT1
NELFA
MDM2
BAMBI
PRELID3B
GJA10
FOXA2
ADAM17
PLXNB1
NFATC1
RPLP1
AFG1L
ERI1
UFSP2
C4orf47
ERRFI1
TARBP2
NPFF
MAP3K12
PRKD1
RBBP8NL
YTHDF2
ZBTB25
ZBTB1
ZC2HC1C
ACYP1
SMIM22
ROGDI
CDC42EP3
PKIB
NANP
LIPK
PRDM10
TNRC18
TRAP1
ERFL
ZNF248
ZSWIM4
YOD1
PFKFB2
ZNF90
SLC2A9
RPIA
CS
KDM3A
CNOT2
IGF2BP3
LIX1
CTF1
BCL7C
CENPBD1
DNAJB5
BTBD3
PFN2
MRPL34
DDA1
ABHD8
MAP2K3
GPC6
KDM7A
CRYBG1
SLC40A1
CPLX2
METTL27
LGALS4
IKZF2
CLGN
CATSPERG
CDC42SE2
NFIC
SLC39A10
ZSCAN30
KDM4C
GBX2
BBS9
MINDY2
KCNQ4
TMEM54
ANKRD63
PLA2G4D
ING1
CARS2
KAT6A
SS18L1
PSMA7
EBLN1
SGK1
RBMS3
PIGU
LGR6
BOC
PTPRG
PDZRN3
CLK1
FAM162A
CCDC58
FRMD4A
CTSZ
RIC3
NTAN1
RPS3A
PXYLP1
TNS3
ZDHHC17
WDR91
CPLX1
DHRS3
FAM110A
CCDC59
GATD3B
GATD3A
UBL3
DONSON
ETFDH
C4orf46
PDE4D
HES7
ALOXE3
CTBP2
PLAAT4
ACTB
ACTR6
C11orf96
FBN2
TMEM211
NRG2
INHBE
GLI1
FKBP1A
CXXC4
ZNF341
MDK
ICMT
HES3
EIF5
ORMDL3
GSDMB
RGPD8
RGPD5
PEX2
TEX12
BCO2
VIPR2
KLHL4
RAPH1
RIT2
ZNF485
SBNO2
HCAR3
HCAR2
ABLIM3
SNX3
NOMO3
NOMO2
ABCC6
HSPA4L
ZBTB17
NOL4
ZNF827
SRSF10
TRIM56
BMPR1B
ZBTB20
HIC2
SIGIRR
STAT1
EPS8
ZADH2
TSHZ1
WDR7
LAD1
PPP1R13B
RPS8
CMTR1
SYDE2
INHBB
NAA40
TRIP12
FBXO36
SLC11A2
ZFAND6
RILPL1
TBX19
NEK1
CLCN3
NPNT
TTC21B
IGFBP2
RHOBTB1
PDE4C
ARHGAP10
G6PC2
HOXA4
ZP4
NR2F1
SERINC5
GLRA1
RAB11FIP1
LBX1
LZTS1
ETS1
NHS
ZFHX4
ADNP2
ARID3C
RHBDD3
EWSR1
HOXB3
DCTN3
CALCOCO1
FXYD2
ITGB6
PHOX2B
SP2
TMEM120B
DDAH1
CCN1
CITED2
PRRX1
FABP7
TLE4
SP5
CERCAM
MYLK4
ARID3B
TMEM107
ANK2
FGF19
NOTCH2
MAB21L2
ASXL3
LRATD2
NAV3
KDM2B
HOXC6
ME3
FAM222A
ID1
MEIS2
CNTN1
RGS12
MALRD1
CBFA2T2
MTRNR2L2
MSH3
DHFR
DSCAML1
NFIA
SMPDL3A
HOXC4
MRPL3
GRSF1
HOXB4
RIMKLB
ARSG
KDM8
PDE4DIP
EXOC2
PPFIBP2
CR1L
SPATC1L
NCOA7
LAMA4
PAX6
DMRT3
PRDM12
RPL34
TRABD2B
HOXA5
HOXD3
TBX3
HOXC5
SH3BP2
RASSF2
IFI16
IER3
FLOT1
PARP11
EVA1A
NDUFS7
INAFM2
BRINP1
NEK3
TCF7L2
RFX2
FGR
PYDC5
METTL3
SH3BP1
ALDH1A2
PLEKHO2
ARHGAP24
DBX1
CACNA1D
RNF149
PDP2
TMEM14A
SCGB1A1
SULF1
ERLIN2
PSMB5
TAF12
OR10AC1
LYL1
HIP1
PRDM6
MVB12A
VOPP1
HNRNPA2B1
CBX3
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PHC2
PANK4
HES5
ETFBKMT
ARID5A
TESC
ABCG2
TLE1
TMEM212
SEC14L1
RAI14
NEO1
STK38
EAPP
ZFHX3
KCNAB2
JAK3
HSPA1L
HSPA1A