ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584313 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◣ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PSMD1
DUX4
IPO13
RABL2A
RWDD1
RABL2B
VDAC2
CACTIN
ZNF335
MAPKAPK5
TAOK3
SUDS3
NME6
POLR3F
DZANK1
DYNC1LI2
HSPA9
NUP205
NUP85
VTI1B
EXOSC5
BCKDHA
RPL21
C19orf48
POLR2E
GPX4
FAM187A
EFTUD2
CCDC103
S1PR4
NCLN
TBCK
AIMP1
PSMG2
CEP76
NVL
STAM2
ZRANB2
GOSR2
SRD5A1
FARSB
MRPS7
MIF4GD
GGA3
NNAT
BLCAP
LYRM4
FARS2
PES1
CAPRIN1
ATP5MG
DCTN1
TSNAX
REXO1
STAM
FRG2C
SEC61B
ALG2
ACTR10
SKP1
UPF2
SUPV3L1
PNO1
RPS23
ATP6AP1L
GOLGA5
RABGGTB
DPH6
HADHB
HADHA
LOC102724770
DGCR6
RPL35A
IQCG
LMLN
TTC8
UFM1
RBBP5
ZNF576
IRGQ
PSMD12
PI4KB
VARS1
SLC35B1
ICE1
USP1
NDUFA4
ADK
AP3M1
PAK1IP1
C6orf52
SMC2
SFI1
EIF4ENIF1
ANAPC7
COX7A2L
HOXA3
HOXA4
ZNF503
TSN
SART3
ISCU
MRPS5
TMED1
PDAP1
BUD31
RPS27A
CLHC1
SELENOF
HS2ST1
PROSER1
NHLRC3
PCBP1
FRG2
PIP4P1
OSGEP
APEX1
C6orf47
BAG6
APOM
SF3B3
COG4
FAM104A
C17orf80
UBE2I
RPS12
TLE1
HSPA1B
NFKBIL1
DDX39B
ATP6V1G2
XPNPEP3
ST13
DNAJB7
RBKS
BABAM2
PAF1
ARF1
DMRT3
RPS29
LRR1
RND3
ANKLE2
TM9SF1
IPO4
BICRA
COMMD1
CCT4
EIF2S3
NEUROD1
ABCG2
NFIA
PIN4
KITLG
PLAGL1
POU2F2
WNT1
SYNGR4
CALCOCO1
ARHGAP11A-SCG5
ARHGAP11A
PARP11
PAX3
ITGB6
OR6B2
NDUFA10
LRATD2
MSX1
RAB11FIP1
PDE1A
RPL7
RDH10
SUCLG1
RHBDD3
EWSR1
MUC20
PTGES2
ARHGAP22
HOXA1
HOXA2
PPP1R1B
NCOR2
NOTCH2
TAF9
RAD17
AK6
TMEM120B
SEC11C
GTF3C4
DDX31
FGD3
CITED2
GADD45GIP1
GRIK2
RPL34
GJA8
ALDH1A2
LZTS1
MRPL3
G6PC2
EVX2
NRARP
ZFHX4
LAMA4
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FZD8
ICMT
HES3
KCNK16
GUCY2C
PDE1B
TLE4
NEUROG1
OAZ3
MRPL9
MRTO4
EMC1
SOGA3
C1orf105
USP17L21
USP17L20
USP17L12
USP17L22
HES1
PKHD1
WEE2
DENND11
ZFHX2
THTPA
AP1G2
CCDC200
CDC73
MYH2
STK36
RNF25
MYRF
SPRR1A
TMEM70
ELOC
CDPF1
HOXA5
SKIL
SNAPC1
PIGX
CEP19
BRINP1
FOXP2
COL17A1
SH3BP5
TMEM72
HOXB3
DDAH1
CCN1
HOXB4
MEF2C
C10orf90
CNPY2
GSX2
PAM
RPEL1
MTRF1
FOXB2
CHD7
QPRT
PALM2AKAP2
NEUROG2
TMEM242
NR2F1
MSX2
LRIG3
CABP7
GLRA1
FGF19
RPN1
AGMO
SPTBN1
ACSS3
ARHGAP24
PHC2
VAV3
HDAC9
VIM
TRNP1
SMARCA2
ANK2
SGPP2
PIPOX
UNCX
DHRS3
SLA
CCDC9
SEMA4D
ZNF585B
ZNF383
SPCS1
GLT8D1
PRDM13
MYLK4
PDE4DIP
NPAS4
CLDN11
SMUG1
TRIL
PDE6B
FREM1
DPYD
LAMB4
TRIM65
MRPL38
SERINC5
OTUD1
ZNF608
HMX2
BUB3
GORAB
TRABD2B
ATOH8
ASXL3
RARB
DAPL1
ID1
MED4
CD69
AXDND1
USP17L13
USP17L11
USP17L18
USP17L10
TLE3
CBFA2T2
VEZT
FGD6
BNIP3
TNP2
PRM3
PRM2
PRM1
TPO
IKBKB
SH3RF2
FABP7
SMPDL3A
USP17L17
USP17L15
SEC22B
BECN2
GALNTL6
SLC2A9
GMPR
C5orf63
RAI14
GNG12
KCNK10
CTXN3
KBTBD8
BTBD1
HOXB5
PDHX
APIP
RIMKLB
GAS2L3
ETS1
HOXC6
HOXC5
METRN
ANTKMT
GPSM1
HSPA6
ATP1A4
WDPCP
PCBD2
SCGB1A1
ATP2C2
FMN1
CS
SDK2
INSC
SLC26A2
PCDH1
REC8
LRRC10
MRGPRX3
SLAMF8
TRMT9B
TANC1
DLG2
ALDH1B1
GALNT14
NELFA
FRMD7
CEBPD
RPH3A
BCHE
ID2
CEP41
ZGPAT
ARFRP1
FMN2
GFRA1
HMX3
NEUROG3
TSSK4
DUSP29
MBTPS1
CDX2
LARP7
ARHGAP10
PMAIP1
ZP4
ATOH1
PDE12
LBX1
IGFBP2
DUSP6
CCDC33
INSM1
BBS9
LEFTY2
NHS
ADNP2
ARID3C
TPM1
S100A10
UNKL
URM1
DCTN3
SOAT2
IGFBP6
FXYD2
TLE2
CDCA7L
C16orf91
HOXB1
DLL4
PHOX2B
SP2
ST18
DLX4
PDHB
PRUNE2
SYBU
PRRX1
ID3
RARA
ECEL1
SP5
TPRA1
MCM2
CERCAM
RBPJ
ARID3B
TMEM107
MAB21L2
NFE2
CDH18
NAV3
KDM2B
ZNF746
CLGN
ME3
FAM222A
KCNN4
MEIS2
CNTN1
GATA4
RGS12
GPR108
FOXP1
MALRD1
MYRIP
PAH
ASCL1
MTRNR2L2
MSH3
DHFR
ALKBH5
DSCAML1
ERRFI1
RBBP7
TRIP10
METTL24
GADD45G
HOXC4
CCNDBP1
POP5
GRSF1
IL23R
DMBX1
IL17RD
KAZALD1
ARSG
KDM8
EXOC2
PPFIBP2
RUNX1T1
CR1L
SPATC1L
CYP26A1
NCOA7
PAX6
MTRNR2L1
PRDM12
KMT2A
HOXD3
MRPL34
DDA1
ABHD8
OTX1
TBX3
ZNF652
SH3BP2
BFSP1
RASSF2
IFI16
IER3
FLOT1
LPIN1
EVA1A
NDUFS7
SH2B1
INAFM2
NEK3
TCF7L2
RFX2
FGR
PYDC5
PKDCC
METTL3
SH3BP1
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
FKBP1A
DBX1
CACNA1D
RNF149
PDP2
TMEM14A
UPF3A
SULF1
ERLIN2
METTL11B
PSMB5
ABLIM3
TAF12
OR10AC1
LYL1
HIP1
PRDM6
MVB12A
RPS10-NUDT3
RPS10
KDM6B
KAT6B
VOPP1
HNRNPA2B1
CBX3
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PANK4
HES5
GTF3A
ETFBKMT
ARID5A
TESC
LIN28A
RPS24
POLR3A
SRSF11
LRRC40
TMEM212
SEC14L1
NEO1
STK38
EAPP
ZFHX3
KCNAB2
JAK3
PDZRN3
HSPA1L
HSPA1A
NUTM2D
TBC1D10C
PPP1CA
CADM3
PARK7
MYBPC3
CCPG1
C15orf65
TDG
C12orf73
FBXL18
VIP
TIGD1
EIF4E2
HNRNPD
CHODL
FRAT2
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
MRS2
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
SNCG
MMRN2
KMT2E
KIF21B
HOXD4
KDM3A
GRHL3
PRDM10
SLC7A5
UBXN10
PLA2G2C
TBC1D8
MBNL3
ERCC1
RASA4
PAX8
CCDC88A
SPECC1
RASL12
KBTBD13
LYPD1
BRWD1
ARHGEF10L
NADK
CATSPERG
ACTB
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
DGKZ
ENO1
WDR6
KLF17
HAND1
FOXB1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
AMD1
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
MEOX1
OTUD7B
ADM
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
REV3L
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
SMURF1
CCDC114
NEK7
GGCT
CD79A
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
NEBL
NRXN2
HOXC8
VAV1
SH2D3A
KHDRBS1
SOX21
MXI1
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
DENND2D
CCDC174
ZNF367
DIAPH3
DDX3X
CNOT2
IMPG1
POLD2
IRX5
LIG3
CBFA2T3
GATA6
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
ASB6
MNT
NFKBIA
IQCH
DMD
CRABP2
AAGAB
TYRO3
TTC13
RXRA
ZNF414
LDLRAP1
ZFYVE28
CFAP99
ZDHHC1
CD38
INAVA
BCL3
CPVL
CHN2
BNC2
SKI
HEBP2
TRERF1
CMTR1
TPST2
TUBB
RAC2
MDC1
DTX4
FTL
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
MINDY2
SCAMP4
NDRG1
ADAT3
MYO1G
NTRK2
CREB5
DIPK1B
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
CLDN2
AQP6
MYO1B
H6PD
PPIB
PTK2B
PDPN
DISP2
ARHGEF1
TNFRSF19
RAB11B
ADGRL2
NDFIP2
KBTBD11
COL23A1
MAPKAPK3
CISH
KCNIP4
RYBP
H2BU1
H2AW
GUCY1A1
COL11A2
ADGRG5
SHB
CDX1
ANKRD1
SMARCD2
SMAD3
GALNT10
FOXA2
AGTRAP
PLCB2
CDK5R1
SEPTIN4
BAX
USP3
NKIRAS1
GFI1
BST2
ERI3
MYO1F
PDE4D
ADCY7
RPL22
RNF207
PCTP
NAA80
IFRD2
HYAL3
PEX14
KCNH2
DFFA
TMEM275
YTHDF2
FAM120B
HMGCS1
PRDM1
NAA10
ARHGAP4
CYP51A1
CLDN9
EVX1
PPCDC
ZNF397
LRCH4
FBXO24
ELANE
CFD
MRPS24
THRAP3
SLC35E2B
HESX1
PXYLP1
PPP1R1A
NOTUM
TBRG4
ADORA2A
HIBADH
CYP2E1
CCND3
RABGAP1L
NDUFV1
ARIH2
TXNRD1
TUBB3
NR1D2
MC1R
RNF139
SH3TC1
HNRNPF
TMEM9
STAT1
CYCS
TAF15
ZDHHC4
GSPT1
RNF166
CTU2
DGAT2
IGF2BP3
CNTN4
SYTL1
SYTL3
CRYBG1
SP7
BNIP2
DYNLL1
NECTIN1
B3GALT5
MECOM
MAGIX
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
CDC42EP2
ARID2
SCNN1A
LTBR
DPP9
RNPEPL1
DUSP28
ANKMY1
MDFIC
CLIC4
PTP4A2
SEMA6D
NR2C1
LAT2
CPT1A
ABHD17A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
CHRND
KIF26A
DHX16
DTNB
TTI2
SP1
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
LRGUK
ZFX
RBL2
FAM118A
HNF1A
SRPRA
GAS7
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
HHIP
VGLL4
PCDH11Y
FAF2
NXPH4
C12orf50
C12orf29
ZNF3
COPS6
WT1
CXXC4
SOCS3
SMIM3
ARMC12
UPP1
CASC3
CALM2
ZNF341
CD164
CTTN
SLC39A13
ELMO1
LIX1
TYROBP