ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584308 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◣ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
PSMD1
NUP205
RABL2A
G6PC2
POLR3F
DZANK1
NME6
IPO13
RABL2B
NVL
CACTIN
RWDD1
TAOK3
SUDS3
RPL21
LARP7
FARSB
C19orf48
TBCK
AIMP1
DUX4
NUP85
POLR2E
GPX4
HSPA9
PAK1IP1
C6orf52
VDAC2
SERINC5
MAPKAPK5
PES1
PPP1R1B
ATP5MG
FAM187A
EFTUD2
CCDC103
S1PR4
NCLN
ANAPC7
SEC61B
ALG2
ZFHX4
MRPS7
MIF4GD
GGA3
HADHB
HADHA
PSMG2
CEP76
GOSR2
ZRANB2
DCTN1
VTI1B
EXOSC5
BCKDHA
ZNF576
IRGQ
NNAT
BLCAP
PNO1
UPF2
RPL35A
IQCG
LMLN
STAM
LYRM4
FARS2
DYNC1LI2
ARF1
XPNPEP3
ST13
DNAJB7
ZNF608
STAM2
PI4KB
SART3
ISCU
NEUROG2
SF3B3
COG4
ADNP2
PCBP1
PSMD12
TSN
TMED1
SELENOF
HS2ST1
RPS27A
CLHC1
LOC102724770
DGCR6
FZD8
CAPRIN1
NDUFA4
CDX2
RHBDD3
EWSR1
UFM1
ACTR10
RAB11FIP1
ADK
AP3M1
WNT1
SRD5A1
RPS12
LBX1
FABP7
SMPDL3A
VARS1
ZNF503
RBBP5
CALCOCO1
RPS23
ATP6AP1L
SMC2
SUPV3L1
TSNAX
MRPL3
SLC35B1
PRDM12
ITGB6
ERRFI1
TPM1
EVA1A
ANK2
REXO1
HSPA1B
SKP1
TTC8
COX7A2L
PDAP1
BUD31
DEFA5
GLRA1
FGF19
RABGGTB
NR2F1
PIP4P1
OSGEP
APEX1
C6orf47
BAG6
APOM
PROSER1
NHLRC3
ETS1
UNKL
C16orf91
LAMA4
FOXP2
ARID3C
DCTN3
ICE1
PIN4
MYO10
DDAH1
CCN1
LRGUK
ARHGAP11A-SCG5
ARHGAP11A
PALM2AKAP2
FAM104A
C17orf80
RIMKLB
MRPS5
MUC20
GOLGA5
DMRT3
MYLK4
NAV3
DPH6
CHODL
LRIG3
TMEM107
PARP11
PAF1
ME3
VIP
TMEM14A
SFI1
EIF4ENIF1
USP1
RBKS
BABAM2
SYNPO
SYBU
NEK7
TMEM120B
PPFIBP2
PTGES2
NHS
ICMT
HES3
IGFBP2
PDHB
MALRD1
FEZF2
SOX21
DBX1
PLAGL1
DAPL1
NOTCH2
RGS12
RABGAP1L
NEUROG3
ABLIM3
TDG
C12orf73
FOXD3
PAX8
RPL7
RDH10
BICRA
TLE4
PDZRN3
SMURF1
MXI1
SOAT2
IGFBP6
RGL1
SEC11C
RFX2
ALDH1A2
ABCG2
VEZT
FGD6
SMARCA2
PHC2
KCNK16
CLDN11
ASXL3
ARHGAP10
UBE2I
LRATD2
NFKBIL1
DDX39B
ATP6V1G2
KRT20
MEIS2
ARHGAP24
PHOX2B
SPACA1
FOXB2
SUCLG1
HOXA3
HOXA4
FRG2C
TLE1
KDM8
NMNAT2
HES1
EIF2S3
LRIG1
GPR176
RPS29
LRR1
PCDH11Y
COMMD1
CCT4
ZNF585B
ZNF383
SEMA6D
CEP41
STK36
RNF25
CCDC33
LMO4
MRTO4
EMC1
OR6B2
NDUFA10
ARHGEF28
SCGB1A1
C5orf63
REV3L
C8B
URM1
FRMD7
HOXB1
CCDC88C
NUTM2D
MNX1
TAF9
RAD17
AK6
CACNA1D
ACSS3
VGLL4
TMEM275
TM9SF1
IPO4
TSSK4
BRINP1
LDHB
VCAN
CBFA2T2
USP29
AQP6
GATA6
HHIP
RAI14
GAS7
PRRX1
NEK3
B3GALT5
BECN2
CERCAM
KDM2B
GADD45GIP1
SULF1
PGLYRP1
IGFL4
ZFAND1
CHMP4C
ATOH1
STARD13
MET
FAM222A
METTL24
ZFX
TLE2
SUPT20HL1
PLEKHG4B
TEX2
STXBP5L
CITED2
FHL1
ALPL
SOGA3
WT1
CLEC18C
MED4
BFSP1
PKDCC
METTL11B
COL17A1
GORAB
NRG2
NCOA7
PSMB5
EVX1
ELMOD2
KIF16B
PPP1R1A
PCBD1
BNIP3
RPS24
POLR3A
IRF2BP2
BAIAP2
SALL1
SYNPR
TP53INP1
TLE3
HK3
TPO
BTBD1
CNPY2
RPL34
RBP3
PITPNM3
ALKBH5
GGCT
TMA16
FGFR2
SEC22B
PJA2
DTX4
CNTN4
PLEKHA5
TBX3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC7A5
TYRO3
MTMR7
TTR
LMO1
PDE6B
AMD1
TNFRSF19
CETN1
PDE4DIP
MAB21L2
CR1L
TESC
PPP1R16B
LRRC1
TPST2
GRIK2
SLA
OCLN
MOB3B
DMBX1
HNF1A
MSX1
PKHD1
NPAS1
LZTS1
GFRA1
SECISBP2L
FREM1
TANGO6
FOXB1
DIO2
TFAP2B
FRG2
NEUROG1
CLDN2
PDE1B
NXPH2
EVX2
TRABD2B
TPH2
FILIP1L
PDE12
CDH18
RUNX1T1
PPP1R12B
DHX32
MBNL3
RXRG
GMPR
OAZ3
MRPL9
CYP26A1
RFX3
FRS2
DNAJA1
APTX
C1orf226
PIK3C2A
SLAMF8
NEUROD1
NECTIN1
CCDC198
SLC14A1
HOXA1
HOXA2
VOPP1
CD69
GTF3C4
DDX31
HOXB3
DLX4
HOXB4
CATSPERG
IL17RD
KLHL7
EFNB2
ADO
TAPT1
RPN1
ELMO1
TRMT9B
CP
ZPBP
GCSAM
CLGN
NCOR2
SMIM28
CS
CADM3
TBC1D8
SLC10A2
AGMO
METTL3
SALL2
VSIG10L2
RARB
SNAPC1
KLHDC8A
MDFIC
TCF7L2
HPCAL1
C8orf34
NID1
SP8
ERLIN2
ZNF367
CXXC4
GALNT14
NFKBIZ
SLC15A3
PANK4
HES5
PPP2R5A
NOTCH1
PPBP
PF4
CXCL5
HOXD3
HOXD4
MEF2C
CNN3
PRR16
TTI2
CPA1
ZCCHC13
BAZ2B
SOX6
EGF
BBS9
DIPK1B
CPEB2
MBTPS1
ADAMTS18
BHLHE22
SALL4
ATOH8
CDC42BPA
UNCX
SNCG
MMRN2
CTXN3
SLC39A6
CDH16
TNNI3K
ST8SIA3
SOST
SCHIP1
ZFHX3
HAPLN1
HOXC4
PRDM13
PTGR1
DUSP6
CDC73
ADGRL2
CEBPA
ECM1
KRT16
HNMT
CER1
RBBP7
CAMTA1
ID1
KIF21B
ADM
CRYAA
CRYAA2
PAH
ASCL1
SYTL2
ZGPAT
ARFRP1
RARA
ZDHHC1
ZNF214
NLRP14
LOC102723360
RHOB
HAND1
PAM
FGD4
GATA3
CHD8
TCF4
THRA
GZMK
PARS2
GAD2
EPB41L5
RTP4
ST18
OR10AC1
ZFHX2
CLEC19A
OR5A2
OR5A1
PRRC2C
TMEFF2
KCNN4
TRIM65
MRPL38
TMEM9
JAKMIP1
CLEC18B
ABCA4
OTUD6A
AWAT2
AGPAT4
TCF12
EPB41L2
ABHD17C
CBY2
PCBD2
SPG7
KBTBD8
TMCC3
NINL
NFIA
ZBTB2
PRKCA
NXPH4
LIMK2
FOXP1
CCDC169-SOHLH2
CCDC169
NUP93
TMEM132C
WRAP53
TP53
DACT2
RIC8B
RBM20
AMBN
P2RY14
CUBN
ID2
ZBTB38
KMT2A
LIN28A
LIPG
ZC3H12B
ALG14
PDPN
CCND1
GJA1
SPAM1
WDR59
CD83
LMO3
KCNIP4
TRIM2
SOX5
SASH1
PADI2
TNRC6B
PDHX
APIP
ZNF746
HTR1F
FOXA2
MIER1
DNAI4
PGM2L1
GUCY1A1
ALOX5AP
PHACTR2
TANC1
HAAO
SSBP3
AJUBA
NOTCH2NLB
OAZ2
FLNB
AIPL1
EIF1
PIMREG
CNTN1
SLC2A9
CFAP69
ARSF
NEUROD4
LRRC4
CARD10
RIPOR2
TFDP2
MXRA7
CHD1
MAP2
DMRTA1
INSM1
RASL12
KBTBD13
LHX2
RAX
AXDND1
CELF4
PMFBP1
DLGAP1
NDUFB3
FAM126B
LRRC10B
BMPR1B
TWIST1
LDLRAP1
ARMC12
PCDH18
TSPAN11
MBNL1
DAAM1
TAS2R9
TAS2R8
TAS2R7
CCDC200
KCNN2
ARHGEF10
ZNF385B
PCDH17
BNC2
FAM107A
SPON1
FRYL
ANKS1B
FAM171A2
AKAP7
CREB5
UTRN
ACBD5
PRRC2B
TPRA1
MCM2
REC8
CCDC141
ITFG2
FERD3L
DMD
SOCS3
LIN28B
APOLD1
GPC6
CCDC59
IPO11
DIMT1
APP
BMP5
CPA2
FAM120B
DLL1
FHDC1
ERCC1
GNB2
IGFN1
ACTL6B
FMO3
H2BU1
H2AW
THRAP3
CDC42EP2
RPS10-NUDT3
RPS10
PON2
LCA5
LAPTM4A
FABP5
SH2B1
VANGL2
MAFA
RFX6
POU2F1
GALNTL5
TNFSF18
PAX3
RPL17-C18orf32
RPL17
ARID5B
CDK14
JDP2
FABP9
USP17L21
USP17L20
USP17L12
USP17L13
USP17L11
USP17L18
USP17L10
SHOX2
RSRC1
YAP1
SFPQ
ELAC1
PLAAT4
SVOPL
DUSP29
PMAIP1
ZP4
SKIL
LEFTY2
S100A10
FXYD2
CDCA7L
DLL4
SP2
ANKLE2
PRUNE2
ID3
ECEL1
SP5
RBPJ
ARID3B
NFE2
HOXC6
GATA4
GPR108
TMEM70
ELOC
MYRIP
MTRNR2L2
MSH3
DHFR
DSCAML1
TRIP10
GADD45G
CCNDBP1
POP5
GRSF1
IL23R
KAZALD1
ARSG
EXOC2
SPATC1L
PAX6
MSX2
USP17L22
MTRNR2L1
HOXA5
MRPL34
DDA1
ABHD8
OTX1
HOXC5
ZNF652
SH3BP2
RASSF2
IFI16
IER3
FLOT1
LPIN1
NDUFS7
INAFM2
SPCS1
GLT8D1
FGR
PYDC5
SH3BP1
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
DHRS3
FKBP1A
RNF149
PDP2
UPF3A
TAF12
LYL1
HIP1
PRDM6
MVB12A
KDM6B
KAT6B
HNRNPA2B1
CBX3
HUS1
MTRNR2L8
CMTM7
HEXIM2
GTF3A
ETFBKMT
ARID5A
NELFA
SRSF11
LRRC40
TMEM212
SEC14L1
NEO1
STK38
EAPP
KCNAB2
JAK3
HSPA1L
HSPA1A
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
FBXL18
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
MRS2
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
KMT2E
KDM3A
GRHL3
PRDM10
UBXN10
PLA2G2C
RASA4
CCDC88A
SPECC1
LYPD1
BRWD1
ARHGEF10L
NADK
ACTB
IER3IP1
POR
CARNS1
NCOA2
FGFRL1
DGKZ
ENO1
WDR6
KLF17
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
KITLG
MEOX1
OTUD7B
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
CAND1
RASA4B
STIL
DIAPH1
NBPF1
CCDC114
CD79A
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
NEBL
NRXN2
HOXC8
VAV1
SH2D3A
KHDRBS1
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
DIAPH3
DDX3X
CNOT2
IMPG1
POLD2
IRX5
LIG3
CBFA2T3
ZCCHC3
CCKAR
C20orf96
ASB6
MNT
NFKBIA