ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◣ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
NME6
PSMD1
IPO13
ZNF335
S1PR4
NCLN
DYNC1LI2
TAOK3
SUDS3
CACTIN
RWDD1
NUP85
NEUROG2
VTI1B
VDAC2
POLR2E
GPX4
MRPS7
MIF4GD
GGA3
FAM187A
EFTUD2
CCDC103
HSPA9
NUP205
PSMG2
CEP76
TSN
TBCK
AIMP1
NVL
GOSR2
REXO1
DUX4
DCTN1
TSNAX
STAM2
RPL21
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
C19orf48
SEC61B
ALG2
PES1
STAM
CAPRIN1
PNO1
SRD5A1
RBBP5
NNAT
BLCAP
SLC35B1
UPF2
FARSB
LYRM4
FARS2
ACTR10
ATP5MG
PCBP1
NEUROG3
PAK1IP1
C6orf52
NDUFA4
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
ANAPC7
LBX1
PI4KB
SART3
ISCU
PDAP1
BUD31
UFM1
MRPS5
ICE1
RPL35A
IQCG
LMLN
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
RABGGTB
ADK
AP3M1
RBKS
BABAM2
USP1
PROSER1
NHLRC3
ARF1
FAM104A
C17orf80
SMC2
SFI1
EIF4ENIF1
LOC102724770
DGCR6
PIP4P1
OSGEP
APEX1
FRG2C
G6PC2
XPNPEP3
ST13
DNAJB7
RPS12
RPS27A
CLHC1
BICRA
HSPA1B
ICMT
HES3
PAF1
ZNF503
UBE2I
COMMD1
CCT4
TM9SF1
IPO4
TSSK4
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
MRTO4
EMC1
ATOH1
ARHGAP11A-SCG5
ARHGAP11A
LARP7
ADNP2
FZD8
ARID3C
DCTN3
PIN4
C6orf47
BAG6
APOM
RPS29
LRR1
NEUROD1
RBBP7
GTF3C4
DDX31
INSM1
WNT1
NFKBIL1
DDX39B
ATP6V1G2
UNKL
C16orf91
ARHGAP10
RPN1
FRG2
CD79A
ARHGEF1
CCDC33
ZNF608
SUCLG1
NEUROG1
CDC73
EIF2S3
OAZ3
MRPL9
ANKLE2
TAF9
RAD17
AK6
GLRA1
SKIL
PMAIP1
NAV3
URM1
TPM1
CALCOCO1
PCBD2
RHBDD3
EWSR1
NR2F1
CDX2
PDHX
APIP
SEC11C
RPL7
RDH10
CR1L
PPP1R1B
LPIN1
GADD45GIP1
ME3
RAB11FIP1
PRUNE2
OR10AC1
PTGES2
UNCX
ZGPAT
ARFRP1
NHS
PAH
ASCL1
EVX1
EVA1A
STK36
RNF25
ZP4
SERINC5
PRDM12
RIMKLB
PSMB5
DLX4
ALKBH5
IGFBP2
KDM8
ZNF585B
ZNF383
DIPK1B
SRSF11
LRRC40
LZTS1
ANK2
NOXO1
SYNGR3
GFER
CNPY2
DBX1
TLE2
SH2B1
PDHB
PPP1R1A
CCDC200
MUC20
ETS1
PLAGL1
GORAB
FGF19
TMEM70
ELOC
AXDND1
RYBP
LRATD2
ITGB6
FAM222A
ERRFI1
SNAPC1
ECM1
KIF26A
ECEL1
DDAH1
CCN1
KIF21B
WDR59
LAMA4
TRABD2B
EIF4H
HOXB1
RBPJ
NELFA
SLC7A5
CLDN2
PDE12
MYLK4
RGS12
SULF1
MEIS2
TEX46
KDM1A
DMBX1
DTX4
CASC3
DLL4
PRRX1
BFSP1
CLEC18C
HK3
KDM2B
MYRIP
RAI14
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
ZFHX4
SYNPO
TBC1D8
LRGUK
TMEM120B
MALRD1
ASXL3
BRWD1
PDE6B
CLGN
TLE4
ZNF746
FAM118A
JAKMIP1
CRYAA
CRYAA2
DDX3X
TPRA1
MCM2
TESC
TIGD1
EIF4E2
HOXB3
HOXB4
NUTM2D
GFRA3
TMA16
POP5
PPP1R35
ZCWPW1
MEPCE
NRDE2
HOXA3
HOXA4
CDIP1
ID1
SCGB1A1
CERCAM
HOXD3
HOXD4
SOAT2
IGFBP6
ASB6
DGKZ
TRIM65
MRPL38
CCNDBP1
ARL14EP
MBTPS1
MNT
B3GALT5
C6orf132
CS
TDG
C12orf73
GTF3A
SMARCA2
NRXN1
SPHK2
SLC7A6OS
PRMT7
RPL18
FAM83E
SLC10A2
FEZF2
USP17L21
USP17L20
USP17L12
USP17L22
DUSP6
CNTLN
PNKD
DAPL1
PGLYRP1
IGFL4
PCBP2
VOPP1
FABP7
SMPDL3A
SOX21
COL17A1
SYBU
NCBP3
RPS10-NUDT3
RPS10
ZFHX3
PAX8
GATA3
CCDC43
MRPL3
IL17RD
TMEM212
FOXP2
RFX2
LRIG1
LRRC1
ZNF341
RNF138
SFT2D2
GADD45G
NRXN2
SOCS3
LRRC4
DMRT3
RNF32
ACBD6
SKOR1
ADGRL2
MBNL3
TMSB15B
RECQL4
LRRC14
MFSD3
GPT
TMEM97
IFT20
NEUROD4
AQP6
RASL10B
CADM3
ERCC1
WDR47
RPS26
CPVL
CHN2
DUSP2
ASTL
RRM1
DAAM1
MXI1
GAD2
NPAS4
SRRM3
TMEM275
CDH16
MDFIC
CCND1
CALHM6
ZNF292
RARA
CATSPERG
SLC39A6
CBFA2T2
BAIAP2
C12orf42
LDLRAP1
CLEC19A
TMEM107
STARD13
RCOR2
HNRNPA2B1
CBX3
MUSTN1
ITIH4
NEK7
VANGL2
TCHP
PKNOX2
E2F6
CHD8
TPST2
HNF1A
OR8J1
CPLX1
AP1B1
ZBTB25
ZBTB1
MYO10
CNN3
SPACA1
CDX1
KLHDC8A
LRP2
CDC42EP2
PARP11
SGK3
DNAJB2
TPH2
ID2
FOXP1
GPR20
RXRG
SALL1
PEX2
CLEC18B
SEMA4B
ZNF891
ZNF10
HNRNPD
CAMTA1
UGT8
GUCY1A1
LEKR1
EVI5
ITPRIP
RUNX1T1
RPS24
POLR3A
HHIP
MSX2
KMT2A
DHX32
MGST1
RCOR1
TRDMT1
RHBDD1
HEY1
TNNI3K
ZNF783
FTCDNL1
KAT6A
CEP41
TUBB3
MC1R
NINL
SEMA6D
PLXNB1
TBC1D15
RGL1
POLR2J3
MET
SCARB1
PDPK1
CEMP1
PPFIBP2
ARHGEF28
NEK3
ZNF367
USP17L13
USP17L17
USP17L15
YAP1
USP17L11
USP17L18
USP17L10
SLC25A6
DUSP29
HOXA1
HOXA2
PALM2AKAP2
RARB
LEFTY2
S100A10
FXYD2
CDCA7L
PHOX2B
SP2
ST18
CITED2
ID3
MSX1
SP5
ARID3B
NOTCH2
MAB21L2
NFE2
CDH18
TLE3
HOXC6
KCNN4
CNTN1
GATA4
GPR108
MTRNR2L2
MSH3
DHFR
DSCAML1
NFIA
TRIP10
METTL24
HOXC4
GRSF1
IL23R
KAZALD1
ARSG
PDE4DIP
EXOC2
SPATC1L
CYP26A1
NCOA7
PAX6
MTRNR2L1
RPL34
HOXA5
MRPL34
DDA1
ABHD8
OTX1
TBX3
HOXC5
FRMD7
ZNF652
SH3BP2
RASSF2
IFI16
IER3
FLOT1
NDUFS7
INAFM2
BRINP1
TCF7L2
FGR
PYDC5
PKDCC
METTL3
SH3BP1
ALDH1A2
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
DHRS3
FKBP1A
ARHGAP24
CACNA1D
RNF149
PDP2
TMEM14A
UPF3A
ERLIN2
METTL11B
ABLIM3
TAF12
LYL1
C5orf63
HIP1
PRDM6
MVB12A
KDM6B
KAT6B
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PHC2
PANK4
HES5
ETFBKMT
ARID5A
LIN28A
ABCG2
TLE1
SEC14L1
NEO1
STK38
EAPP
KCNAB2
JAK3
PDZRN3
HSPA1L
HSPA1A
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
FBXL18
VIP
CHODL
FRAT2
RPS6KA1
SMC6
GEN1
SASH3
NRROS
C11orf24
MRS2
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
SNCG
MMRN2
KMT2E
NCOR2
KDM3A
GRHL3
PRDM10
UBXN10
PLA2G2C
RASA4
CCDC88A
SPECC1
RASL12
KBTBD13
LYPD1
ARHGEF10L
NADK
ACTB
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
PAX3
ENO1
WDR6
KLF17
HAND1
FOXB1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
AMD1
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
KITLG
MEOX1
OTUD7B
ADM
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
CLDN11
MAGEA11
REV3L
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
SMURF1
CCDC114
GGCT
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
MEF2C
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
ACSS3
NEBL
HOXC8
VAV1
SH2D3A
KHDRBS1
SLC2A9
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
DIAPH3
CNOT2
REC8
IMPG1
POLD2
IRX5
LIG3
CBFA2T3
GATA6
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
NFKBIA
IQCH
DMD
CRABP2
AAGAB
TYRO3
TTC13
RXRA
ZNF414
ZFYVE28
CFAP99
ZDHHC1
CD38
INAVA
BCL3
BNC2
SKI
HEBP2
TRERF1
CMTR1
HOXB5
TUBB
RAC2
MDC1
LRIG3
FTL
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
GPAA1
EXOSC4
RNASEH2B
MINDY2
SCAMP4
NDRG1
ADAT3
MYO1G
NTRK2
CREB5
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
MYO1B
H6PD
PPIB
PTK2B
PDPN
DISP2
TNFRSF19
RAB11B
NDFIP2
KBTBD11
COL23A1
MAPKAPK3
CISH
KCNIP4
H2BU1
H2AW
COL11A2
ADGRG5
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
FOXA2
AGTRAP
PLCB2
CDK5R1
SEPTIN4
BAX
USP3
NKIRAS1
GFI1
BST2
ERI3
MYO1F
PDE4D
ADCY7
RPL22
RNF207
PCTP
NAA80
IFRD2
HYAL3
PEX14
KCNH2
DFFA
YTHDF2
FAM120B
HMGCS1
PRDM1
NAA10
ARHGAP4
CYP51A1
CLDN9
PPCDC
ZNF397
LRCH4
FBXO24
ELANE
CFD
MRPS24
THRAP3
SLC35E2B
DLG2
HESX1
PXYLP1
NOTUM
TBRG4
ADORA2A
HIBADH
CYP2E1
CCND3
RABGAP1L
NDUFV1
ARIH2
TXNRD1
NR1D2
RNF139
SH3TC1
HNRNPF
TMEM9
STAT1
EVX2
CYCS
TAF15
ZDHHC4
C1orf105
GSPT1
RNF166
CTU2
DGAT2
IGF2BP3
CNTN4
SYTL1
SYTL3
CRYBG1
SP7
BNIP2
DYNLL1
NECTIN1
MECOM
MAGIX
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
SCNN1A
LTBR
DPP9
RNPEPL1
DUSP28
ANKMY1
CLIC4
PTP4A2
NR2C1
LAT2
CPT1A
ABHD17A
KCTD6
AKIRIN1
IL6R
PRSS56
CHRND
SEC22B
DHX16
DTNB
TTI2
SP1
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
ZFX
RBL2
SRPRA
GAS7
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3