ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584309 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◣ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
NME6
MAPKAPK5
NUP85
DUX4
LBX1
CACTIN
RWDD1
G6PC2
VDAC2
IPO13
TAOK3
SUDS3
HSPA9
NVL
NNAT
BLCAP
NEUROG2
POLR3F
DZANK1
PSMG2
CEP76
DYNC1LI2
FAM187A
EFTUD2
CCDC103
WNT1
NUP205
HADHB
HADHA
STAM
VTI1B
RPL21
LYRM4
FARS2
ARF1
POLR2E
GPX4
GOSR2
C19orf48
ATP5MG
FARSB
CAPRIN1
ACTR10
S1PR4
NCLN
ZNF503
FZD8
PES1
EXOSC5
BCKDHA
TBCK
AIMP1
SRD5A1
SEC61B
ALG2
TSNAX
ZNF576
IRGQ
REXO1
MRPS7
MIF4GD
GGA3
UPF2
TSN
SKP1
LOC102724770
DGCR6
STAM2
TTC8
DCTN1
SLC35B1
ADNP2
RBBP5
CALCOCO1
PAK1IP1
C6orf52
RPL35A
IQCG
LMLN
DPH6
SUPV3L1
PCBP1
ITGB6
PI4KB
COX7A2L
PNO1
GOLGA5
ZNF608
VARS1
FRG2C
GLRA1
SART3
ISCU
ZRANB2
PDAP1
BUD31
UFM1
PPP1R1B
SFI1
EIF4ENIF1
RABGGTB
PLAGL1
ANAPC7
ICE1
PROSER1
NHLRC3
SERINC5
PSMD12
ANK2
XPNPEP3
ST13
DNAJB7
ICMT
HES3
RPS12
MYLK4
SELENOF
HS2ST1
NDUFA4
RPS23
ATP6AP1L
SMC2
FABP7
SMPDL3A
UNKL
C16orf91
FGF19
ETS1
USP1
TMED1
PIP4P1
OSGEP
APEX1
RBKS
BABAM2
HOXA3
HOXA4
HSPA1B
ADK
AP3M1
TLE4
HES1
EVA1A
DBX1
RAB11FIP1
C6orf47
BAG6
APOM
RPS27A
CLHC1
ZFHX4
PARP11
RHBDD3
EWSR1
IGFBP2
ARID3C
DCTN3
MRPS5
VEZT
FGD6
RIMKLB
SF3B3
COG4
PIN4
LARP7
TRABD2B
MUC20
PAF1
CDX2
BFSP1
RGS12
FAM104A
C17orf80
NEUROG3
TMEM120B
ARHGAP11A-SCG5
ARHGAP11A
ABCG2
MRPL3
DMRT3
ME3
PALM2AKAP2
LRATD2
BNIP3
PRDM12
UBE2I
PRRX1
CERCAM
ARHGAP10
NFKBIL1
DDX39B
ATP6V1G2
BRINP1
TAF9
RAD17
AK6
COMMD1
CCT4
FOXP2
URM1
MEIS2
LAMA4
C5orf63
SYBU
OR6B2
NDUFA10
NR2F1
BICRA
SOX21
ARHGAP24
TPM1
VIP
SYNPO
MET
RUNX1T1
MXI1
ATOH1
MRTO4
EMC1
GAS7
RPS29
LRR1
FOXD3
TMEM14A
GMPR
NOTCH2
DDAH1
CCN1
MALRD1
FAM222A
NAV3
FRG2
FXYD2
DSCAML1
ASXL3
SKIL
EIF2S3
RPL7
RDH10
PRUNE2
LRAT
CACNA1D
ERRFI1
TM9SF1
IPO4
TSSK4
IRF2BP2
OR10AC1
SUCLG1
SCGB1A1
PCDH11Y
PTGES2
PAX8
INSM1
IL17RD
DIO2
HOXB3
HOXB4
OPN4
NCOA7
SEC11C
KDM8
HOXD3
FGFR2
CEP41
TPST2
ID1
LMO4
TMEM275
PRDM13
LZTS1
PDHB
SEC22B
FRMD7
TLE1
UNCX
TPRA1
MCM2
HOXD4
OR8J1
NUTM2D
NHS
RAI14
SMARCA2
ATOH8
SLC7A5
SPACA1
CLDN11
MSX1
RBBP7
METTL24
CPA1
CCDC33
GTF3C4
DDX31
PDE1B
COL17A1
LRIG1
PDZRN3
BAIAP2
ACSS3
PDHX
APIP
GPR176
NEK7
LRGUK
CLEC18C
HK3
PKHD1
PPFIBP2
RIC8B
PPP1R1A
SMURF1
ANKLE2
FOXB2
CITED2
PMAIP1
TLE3
DTX4
TMEM107
TDG
C12orf73
GADD45GIP1
KDM2B
NEUROD1
WT1
SYNPR
GGCT
HNF1A
OAZ3
MRPL9
GATA6
CYP26A1
KIF26A
ALDH1A2
METTL11B
DLX4
TPO
STXBP5L
CLEC19A
HOXB1
TMA16
DUSP6
RFX2
NRARP
RPL34
LRIG3
MYO10
PAH
ASCL1
RGL1
DIPK1B
DAPL1
GORAB
SALL1
SPTBN1
FHL1
SLA
UBE2QL1
RABGAP1L
PKDCC
GRIK2
TRIM71
SULF1
CDH16
CHODL
TLE2
EVX1
ZNF214
NLRP14
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
B3GALT5
ARHGEF28
SEMA6D
TRAF3IP2
CP
VGLL4
FEZF2
AQP6
TBX3
TMEM70
ELOC
CAMTA1
ELMOD2
CCDC200
MBNL3
TNNI3K
NEUROG1
FREM1
STK36
RNF25
RBM15
LRRC10B
CDC73
KIF21B
KLHDC8A
ZFX
KBTBD8
PANK4
HES5
CD69
LPIN1
ZFAND1
CHMP4C
PIM1
TANC1
MDFIC
MSI1
DMBX1
ALPL
NEK3
NEBL
SLAMF8
DAAM1
RPN1
DDX3X
ZP4
MAB21L2
NFIA
PDE4DIP
PHC2
RHOB
PCBD2
CCDC198
NRXN1
PTCHD4
POP5
GFRA3
BECN2
CNTN1
ZFHX3
HOXC4
ZGPAT
ARFRP1
LHX2
PIPOX
C10orf90
TESC
YAP1
CR1L
NECTIN1
FBXL18
ACTB
BNC2
EGF
SNAPC1
CATSPERG
CLDN2
AMD1
EVX2
STARD13
ZPBP
WRAP53
TP53
FOSB
USP17L21
USP17L20
USP17L12
USP17L22
NXPH4
HOXA1
HOXA2
CNPY2
SOCS3
LRRC1
PDE6B
CLGN
MEF2C
PRR16
FOXP1
ELMO1
FABP5
CABP7
OCLN
KMT2A
PSMB5
RASL12
KBTBD13
CREB5
CNN3
PLPPR1
ZNF367
TP53INP1
PGLYRP1
IGFL4
SOX6
MEOX1
CDPF1
VCAN
HNMT
HHIP
MEIS3
HNRNPA2B1
CBX3
MUSTN1
ITIH4
SCN5A
CBFA2T2
ZNF746
TBC1D8
SALL4
TEX2
CXCL12
RBP3
CETN1
PLEKHA5
SLC39A6
NRG2
REC8
RPL17-C18orf32
RPL17
CRABP2
EFNA5
ALKBH5
IGFN1
RARA
SCARF1
RILP
PAM
SOX5
ABLIM3
GADD45G
DHRS9
TMEM212
NMNAT2
NCOR2
LOC102724265
ABCB5
PCBD1
CADM3
LMO1
SKA2
PRR11
LIN28B
SKOR1
C1orf226
GUCY1A1
HTR1F
PLCH1
PDE12
ADM
FIGNL2
GNG12
GUCY2C
ZNF585B
ZNF383
CEBPA
ENO1
KCNIP4
ERCC1
ERLIN2
RFX6
BBS9
NELFA
CLEC18A
GNAS
DRD2
SYCN
NCCRP1
REV3L
ECM1
ENPP3
ADO
EPB41L2
CSN3
MIER1
DNAI4
C8B
PDPN
ID2
KRT20
PJA2
NPAS1
CRYAA
CRYAA2
SMIM28
PCDH18
PITPNM3
ACP7
FAM107A
THEMIS
RPL9
LIAS
KRT16
NEUROD4
LIN28A
DHX32
MYH2
CD79A
ARHGEF1
FILIP1L
GSG1
FSTL1
ADAMTS14
B3GALT2
DLL4
NCOA2
RASL10B
RAN
KCNK16
PKNOX2
SREK1IP1
CWC27
TMEM9
PGF
FOXL3
SPG7
CDC42EP2
EFNB2
GATA3
JAKMIP1
RFX3
MTMR7
LIX1
LIMK2
POLR1D
LNX2
CFAP221
SPCS1
GLT8D1
DMD
TTR
CDRT15L2
WDR59
RCOR1
SYDE2
GSX2
USP17L13
FOXB1
USP17L11
USP17L18
USP17L10
BTBD1
LDHB
GALNTL5
CDX1
CACNA1H
SLC1A3
TNFRSF19
GAD2
AGMO
PRRC2C
LMO3
LRRC4
GCSAM
VAV3
VSTM2L
MAP2
ARL4C
SOGA3
OPLAH
EOMES
SOST
GZMK
DUSP2
ASTL
GTF3A
PAX3
NEDD9
PCDH8
FGFR4
HAND1
IKBKB
DACT2
CFAP69
MNX1
LRP2
DUSP29
KCNN4
DLG2
IRS2
DGKZ
ARMC12
KLHL7
PRSS47
CCN2
TSPAN13
PHOX2B
CLMP
OR5A2
OR5A1
BMPR1B
CDC42BPA
SH3BP5
TBL1XR1
LEKR1
OTX1
CPSF4L
MIDEAS
TMEM97
TMCC3
ADGRL2
TNP2
PRM3
PRM2
PRM1
TYRO3
CYRIB
NBPF9
TRIM65
MRPL38
IPO11
DIMT1
PEX2
FABP9
ZCCHC13
GJA3
KDR
SLC2A9
SLC10A2
WBP1L
TMEM132C
UGT1A4
UGT1A5
METTL3
SALL2
USP17L19
TRMT9B
PNKD
FLVCR2
KRTAP12-1
PTPRZ1
PPP1R12B
CHD8
SFTPC
LGI3
BMP1
CA14
SERPINA1
KAT6B
CLEC18B
PRSS23
CS
VANGL2
LOC102723360
ZBTB18
LHX5
EFNB1
CDK18
ASPH
BCO1
GPC4
MBTPS1
SH2B1
GFRA1
TAGLN3
NAF1
HES4
SNCG
MMRN2
AHSP
VASN
GPR20
TCF4
PAX7
ST18
MSX2
AGPAT4
GPC6
RXRG
RPS24
POLR3A
ABAT
NR2F6
EPB41L5
PMFBP1
INHBA
SOAT1
FAM171A2
SLC18A1
RTP4
ABL1
ADGRL3
ASB6
TMEM72
BRWD1
RCOR3
CDH18
PFKM
KIAA1958
C9orf147
DICER1
CCND1
FAM181A
FOXA2
ME2
FLRT3
TRDMT1
AIPL1
PIMREG
IFNA21
MYRIP
PCBP4
GPR62
PADI2
CRB2
VOPP1
CER1
NKX2-6
ARHGAP22
CENPS-CORT
CENPS
RBP1
CMTR1
SLC22A2
EAPP
TAS2R9
TAS2R8
TAS2R7
CCDC141
RAPGEF4
MAFA
PPP1R16B
SUPT20HL1
NOTCH1
CNR1
CNOT2
MECOM
PAK3
ASB1
PREX2
SLC25A6
PDX1
RARB
LEFTY2
S100A10
SOAT2
IGFBP6
CDCA7L
SP2
ID3
ECEL1
SP5
RBPJ
ARID3B
NFE2
HOXC6
GATA4
GPR108
MTRNR2L2
MSH3
DHFR
TRIP10
CCNDBP1
GRSF1
IL23R
KAZALD1
ARSG
EXOC2
SPATC1L
PAX6
MTRNR2L1
HOXA5
MRPL34
DDA1
ABHD8
HOXC5
ZNF652
SH3BP2
RASSF2
IFI16
IER3
FLOT1
NDUFS7
INAFM2
TCF7L2
FGR
PYDC5
SH3BP1
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
DHRS3
FKBP1A
AXDND1
RNF149
PDP2
UPF3A
TAF12
LYL1
HIP1
PRDM6
MVB12A
RPS10-NUDT3
RPS10
KDM6B
HUS1
MTRNR2L8
CMTM7
HEXIM2
ETFBKMT
ARID5A
SRSF11
LRRC40
SEC14L1
NEO1
STK38
KCNAB2
JAK3
HSPA1L
HSPA1A
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
MRS2
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
KMT2E
KDM3A
GRHL3
PRDM10
UBXN10
PLA2G2C
RASA4
CCDC88A
SPECC1
LYPD1
ARHGEF10L
NADK
IER3IP1
POR
CARNS1
FGFRL1
WDR6
KLF17
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
KITLG
OTUD7B
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
CCDC114
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
USP15
SNX3
LRRN4
WNT10B
RARG