ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039039 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◣ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
ZNF335
RABL2A
DYNC1LI2
PSMD1
PSMG2
CEP76
CACTIN
DUSP29
NME6
IPO13
MAPKAPK5
POLR3F
DZANK1
TAOK3
SUDS3
FAM187A
EFTUD2
CCDC103
NVL
NEUROG3
DPH6
VTI1B
NUP85
VDAC2
DCTN1
RPL21
C19orf48
HSPA9
TBCK
AIMP1
NUP205
S1PR4
NCLN
STAM
GOSR2
MRPS7
MIF4GD
GGA3
TSNAX
RWDD1
SKP1
POLR2E
GPX4
CDX2
HADHB
HADHA
STAM2
TTC8
ATP5MG
PNO1
SLC35B1
SEC61B
ALG2
ZNF576
IRGQ
MRPS5
RPS23
ATP6AP1L
DUX4
SRD5A1
PAK1IP1
C6orf52
ZNF503
CDCA7L
SMC2
NNAT
BLCAP
UPF2
TSN
FARSB
RBKS
BABAM2
VARS1
PDAP1
BUD31
CAPRIN1
DLX4
NEUROD1
SUPV3L1
SFI1
EIF4ENIF1
REXO1
PES1
ACTR10
COX7A2L
EXOSC5
BCKDHA
ZRANB2
LYRM4
FARS2
TMED1
SELENOF
HS2ST1
GOLGA5
FGFRL1
RPL35A
IQCG
LMLN
FAM104A
C17orf80
TM9SF1
IPO4
TSSK4
FZD8
USP1
PI4KB
PSMD12
RBBP5
ICE1
HSPA1B
MRS2
ADK
AP3M1
WDR6
NDUFA4
FRG2C
PTGES2
RPS27A
CLHC1
INSM1
PAF1
DLL4
COMMD1
CCT4
VEZT
FGD6
NEUROG1
MUC20
SART3
ISCU
PALM2AKAP2
PDE6B
RPS12
UFM1
RABGGTB
XPNPEP3
ST13
DNAJB7
ANAPC7
PIP4P1
OSGEP
APEX1
PCBP1
ATOH1
C6orf47
BAG6
APOM
PROSER1
NHLRC3
RAB11B
DUSP6
DNAJB8
ECEL1
NFKBIL1
DDX39B
ATP6V1G2
SF3B3
COG4
ST18
NKX2-3
DAPL1
MYRIP
RBL2
SHB
POP5
HESX1
FOXC1
GALNT10
HES1
FRAT2
PIN4
STK36
RNF25
EIF2S3
RPS29
LRR1
ID3
MBTPS1
TAF9
RAD17
AK6
FRG2
LPIN1
LEFTY2
ANKRD1
DENND1A
SEC11C
UNCX
PNPLA1
PMAIP1
GBX1
ARHGAP11A-SCG5
ARHGAP11A
CDH18
LIG3
GADD45GIP1
EHF
LOC102724770
DGCR6
CALM2
KLF17
SUCLG1
OR6B2
NDUFA10
ZNF608
IL23R
BNIP3
TPRA1
MCM2
NXPH4
ZNF664-RFLNA
ZNF664
CCDC92
CERKL
GADD45G
SKIL
UBE2I
RPL7
RDH10
TLE2
PAX8
RBPJ
PCBD2
TCP10L
CNTLN
AEN
ZNF585B
ZNF383
SCIMP
NCOR2
GATA4
OPA3
BCOR
MSX2
MRTO4
EMC1
PDHX
APIP
KHDRBS1
TMEM70
ELOC
PAH
ASCL1
MBNL2
PHLDB2
ACOT2
AMOT
GORAB
NEUROG2
FAM151B
MAL
TIGD1
EIF4E2
GTF3C4
DDX31
DTNB
MAGEA11
COCH
SMAD7
NKIRAS1
NR1D2
RAB17
UPF3A
KDM6B
MLH1
EPM2AIP1
TVP23C
ALKBH5
BMP7
HCRTR1
GJA10
C5orf63
TMPPE
GLB1
IL17RD
ARHGEF38
ICMT
HES3
SLC22A24
CNPY2
GSR
CDC73
RAD54L2
ZBTB38
SYBU
RPN1
MYSM1
ZGPAT
ARFRP1
ZNF649
OAZ3
MRPL9
SYT12
LYPD6B
DMBX1
AXDND1
PRUNE2
APLN
CCDC200
NKX2-6
USP44
MBD2
ZNF592
BANP
CA5A
HOXB1
ZNF652
C15orf61
HEY2
PPP1R2
MARCO
CERCAM
CPVL
CHN2
CCDC85A
SLAMF1
GPR108
TRIP10
LDLRAD4
PKIB
KCNN4
SPCS1
GLT8D1
PLA1A
BICRA
FXYD2
ANKLE2
DSCAML1
SRSF11
LRRC40
SCAMP4
ADAT3
ETFDH
C4orf46
RAN
DUSP4
CHST12
MACROH2A1
USP17L21
USP17L20
USP17L12
USP17L13
USP17L11
USP17L18
USP17L10
CABIN1
PRDM14
RPP25
STK38
AFG1L
USP17L22
NFATC1
FZD10
MS4A4A
MEOX1
ZNF397
EYS
PTCH1
CLEC10A
TMEM242
TFAP2A
HNRNPA2B1
CBX3
CAV3
GATA3
CNTN4
INKA2
RGS19
OPRL1
LKAAEAR1
KIF21B
ELF3
RSPO4
OTX1
NOG
ATP6V0A4
KCNK2
BTNL9
FRMD7
BAMBI
HEBP1
FOXA2
TRIM65
MRPL38
SNX1
CIAO2A
TBC1D8
HECA
LYPD1
FAM118A
PCDHAC1
FOXP2
GBX2
SEC22B
DDX3X
PPP1R35
ZCWPW1
MEPCE
PDE12
STIL
SYNE2
MTRNR2L1
RPH3A
CLDN15
FIS1
EFEMP1
SLC40A1
ZNF850
RGSL1
CFAP126
HAND1
ERLIN2
HNRNPD
JAKMIP1
OLIG3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MIER1
DNAI4
NSUN4
METTL11B
BUB1B
RYBP
HIC2
NFE2
DIRAS1
ARHGAP28
LRMDA
HOXA3
HOXA2
NCOA2
TTC13
ACKR3
GRHL2
RBBP8NL
PLEKHA5
CERS2
ANXA9
C10orf53
SOX14
HOXA1
LIN28A
H2BU1
H2AW
NTAN1
SLC12A3
GPC6
NDUFV2
TYRO3
STRADA
C6orf163
USP17L17
USP17L15
LIPC
CCND3
MAST2
SLC16A12
TCHP
HAPLN1
SSPN
MINK1
IGF2
TAS2R9
TAS2R8
TAS2R7
RARA
DLX6
ZFAND3
TMPRSS7
BTBD3
ZNF746
CYP26A1
USP17L19
TMEM275
ST3GAL2
SGK1
CDS1
ANO1
MID1
RUNX1T1
NFIC
RNF32
SYT7
SDK1
CADM3
MNT
CHKA
CD101
TVP23B
CHPT1
FANK1
UNKL
C16orf91
SNAPC1
PDCD2
TLE5
VENTX
UTF1
H3-3A
TMCC3
CCDC172
PPP1R1B
PRSS22
ACOT1
NEUROD2
MEIG1
DCLRE1C
METTL24
PDPK1
CEMP1
TBL1XR1
YAP1
OSCAR
NDUFA3
HSPA1L
HSPA1A
ZNF90
FOXF1
PXMP2
POLE
BTF3
KAZALD1
CECR2
KLF6
CCL26
NAGLU
LCOR
ZNF436
OPLAH
RIMS2
ETS1
RBBP7
TRAP1
ZNF853
TNS3
CXXC4
ZNF891
ZNF10
GALNT8
ZMIZ2
PCLO
ZFP37
FDFT1
KAT6B
CCDC33
BRWD3
ARL14EP
LIPK
PRDM12
PRDM10
TEX46
KDM1A
TENT4B
RPS10-NUDT3
RPS10
EIF4H
LEF1
SLC25A6
HOXB9
MATR3
STAT1
ADGRA3
MTCH2
CHD8
EN1
CD99L2
FAM234B
ZNF138
CCDC169-SOHLH2
CCDC169
TMEM185A
NAV2
RIMS1
PTPRE
ZNF81
CENPBD1
SPIN1
TIPIN
PRSS8
APBB1IP
KCNJ4
OTP
FAM53B
PTPRG
CLDN9
SP7
CLDN6
CCDC88C
CCNDBP1
TEAD3
CEMIP2
HINT1
BAZ1A
SLC2A6
VIP
ZNF740
CSAD
ID1
LIX1
STRA6
CBX4
SLC39A7
RXRB
HSD17B8
COL11A2
BUB1
STON1-GTF2A1L
FAM89A
WNT3
PODXL
ASB6
FAM24B
FAM120B
DLL1
TNFRSF19
PAX7
SMUG1
TMEM167B
UBE2D2
TXNRD2
COMT
FTL
BAX
AGO1
GARS1
TRIM45
LHX1
GOLM1
TPO
MACROD2
SEL1L2
SYTL1
SUCLG2
ORMDL3
GSDMB
GNG4
CNOT2
ZBTB25
ZBTB1
ERI1
ALDH3A2
TRIM56
PLAGL1
RXRA
PHACTR2
RPS24
POLR3A
TNRC18
GAGE10
OR13A1
GYG2
DUSP12
CDX1
BCAT2
RASL10B
UPK2
NELFA
SEC14L1
PRSS47
RIT2
MUC3A
SHBG
FXR2
YTHDF2
GC
EVC
EVC2
SEMA3C
PKNOX1
PELI2
ZNF296
GEMIN7
KIF26A
BTG1
FBN2
DHRS3
AHSP
SMARCA4
ZNF552
CITED2
SH2B1
SERTAD2
VIPR2
ASS1
SYDE2
NFAM1
FREM1
ZFP64
SERPINA1
ZNF292
ANKRD28
PARP16
CASC3
HOXB3
HOXB4
HOXB5
PRODH
LOC102724788
WNT1
ARF1
LARP7
ARHGAP10
G6PC2
HOXA4
ZP4
NR2F1
SERINC5
GLRA1
RAB11FIP1
LBX1
IGFBP2
LZTS1
ID2
RARB
BBS9
NHS
ZFHX4
ADNP2
ARID3C
TPM1
S100A10
RHBDD3
EWSR1
URM1
DCTN3
CALCOCO1
SOAT2
IGFBP6
ITGB6
PHOX2B
SP2
TMEM120B
DDAH1
CCN1
PDHB
PRRX1
MSX1
FABP7
TLE4
SP5
MYLK4
ARID3B
TMEM107
ANK2
FGF19
NOTCH2
MAB21L2
ASXL3
LRATD2
NAV3
KDM2B
TLE3
HOXC6
CLGN
ME3
FAM222A
MEIS2
CNTN1
RGS12
FOXP1
MALRD1
CBFA2T2
MTRNR2L2
MSH3
DHFR
NFIA
ERRFI1
SMPDL3A
HOXC4
MRPL3
GRSF1
RIMKLB
ARSG
KDM8
PDE4DIP
EXOC2
PPFIBP2
CR1L
SPATC1L
NCOA7
LAMA4
PAX6
DMRT3
RPL34
TRABD2B
HOXA5
KMT2A
HOXD3
MRPL34
DDA1
ABHD8
TBX3
HOXC5
SH3BP2
BFSP1
RASSF2
IFI16
IER3
FLOT1
PARP11
EVA1A
NDUFS7
INAFM2
BRINP1
NEK3
TCF7L2
RFX2
FGR
PYDC5
PKDCC
METTL3
SH3BP1
ALDH1A2
PLEKHO2
FKBP1A
ARHGAP24
DBX1
CACNA1D
RNF149
PDP2
TMEM14A
SCGB1A1
SULF1
CS
PSMB5
ABLIM3
TAF12
OR10AC1
LYL1
HIP1
PRDM6
MVB12A
VOPP1
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PHC2
PANK4
HES5
GTF3A
ETFBKMT
ARID5A
TESC
ABCG2
TLE1
TMEM212
RAI14
NEO1
EAPP
ZFHX3
KCNAB2
JAK3
PDZRN3
NUTM2D
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
TDG
C12orf73
FBXL18
CHODL
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
SNCG
MMRN2
KMT2E
HOXD4
KDM3A
GRHL3
SLC7A5
UBXN10
PLA2G2C
MBNL3
ERCC1
RASA4
CCDC88A
SPECC1
RASL12
KBTBD13
BRWD1
ARHGEF10L
NADK
CATSPERG
ACTB
IER3IP1
POR
CARNS1
LMO4
SALL2
IRF2BP2
DGKZ
PAX3
ENO1
FOXB1
COL17A1
NBEAL2
CCDC12
BIN2
PSTPIP1
SKIV2L
NELFE
AMD1
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
KITLG
OTUD7B
ADM
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
CLDN11
REV3L
CAND1
SHOX2
RSRC1
RASA4B
DIAPH1
NBPF1
SMURF1
CCDC114
NEK7
GGCT
CD79A
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
MEF2C
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ACSS3
NEBL
NRXN2
HOXC8
VAV1
SH2D3A
SOX21
MXI1
SLC2A9
LNPEP
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
DENND2D
CCDC174
ZNF367
DIAPH3
REC8
IMPG1
POLD2
IRX5
CBFA2T3
GATA6
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
NFKBIA