ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584304 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◣ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
NEUROG2
LARP7
RABL2A
DUX4
NUP205
ZP4
POLR3F
DZANK1
PSMD1
NME6
NEUROG3
MAPKAPK5
TBCK
AIMP1
MBTPS1
NVL
HSPA9
POLR2E
GPX4
NUP85
ARHGAP10
CACTIN
IPO13
ICMT
HES3
DYNC1LI2
ZNF503
NNAT
BLCAP
PES1
RWDD1
TAOK3
SUDS3
RPL21
FARSB
LOC102724770
DGCR6
C19orf48
FAM187A
EFTUD2
CCDC103
VDAC2
GOSR2
PAK1IP1
C6orf52
MRPS7
MIF4GD
GGA3
VTI1B
S1PR4
NCLN
SART3
ISCU
ACTR10
DCTN1
PSMG2
CEP76
PNO1
PPP1R1B
SEC61B
ALG2
SF3B3
COG4
HES1
EXOSC5
BCKDHA
SUPV3L1
UFM1
SKP1
TSN
RPL35A
IQCG
LMLN
ATP5MG
PCBP1
TSNAX
PSMD12
ANAPC7
RPS27A
CLHC1
UPF2
STAM2
SLC35B1
STAM
LYRM4
FARS2
DUSP29
NHS
COX7A2L
GLRA1
REXO1
DPH6
ZNF608
SRD5A1
CDX2
ZNF576
IRGQ
ZRANB2
HADHB
HADHA
TMED1
RPS12
RBBP5
TTC8
VEZT
FGD6
HSPA1B
SELENOF
HS2ST1
PI4KB
SMC2
CAPRIN1
MRPS5
FAM104A
C17orf80
XPNPEP3
ST13
DNAJB7
WNT1
ATOH1
PAF1
PIP4P1
OSGEP
APEX1
IGFBP2
NDUFA4
RBKS
BABAM2
URM1
SERINC5
VARS1
LZTS1
SFI1
EIF4ENIF1
GADD45G
GOLGA5
INSM1
ADK
AP3M1
PMAIP1
CCDC33
FRG2C
MALRD1
PDAP1
BUD31
USP1
RPS23
ATP6AP1L
RABGGTB
ADNP2
PROSER1
NHLRC3
PTGES2
ZDHHC1
TM9SF1
IPO4
TSSK4
ICE1
NFKBIL1
DDX39B
ATP6V1G2
LEFTY2
G6PC2
NAV3
HOXA3
HOXA4
PHOX2B
IL17RD
KDM8
NEUROG1
SEC11C
BICRA
RPL7
RDH10
C6orf47
BAG6
APOM
CR1L
CERCAM
PIN4
ARF1
BNIP3
RPS29
LRR1
SUCLG1
CACNA1D
STK36
RNF25
SULF1
ST18
ARHGAP11A-SCG5
ARHGAP11A
TMEM212
ASXL3
TMEM120B
PAX6
RAB11FIP1
RFX2
ABLIM3
KRT20
FAM222A
NR2F1
COMMD1
CCT4
CDX1
TAF9
RAD17
AK6
PPP1R1A
RHBDD3
EWSR1
DLL4
OAZ3
MRPL9
FZD8
ETS1
SLC10A2
CHODL
OR6B2
NDUFA10
NEUROD1
TPM1
RIMKLB
PANK4
HES5
CLDN2
EPHA5
PAH
ASCL1
PRUNE2
TCF7L2
TTYH1
LRATD2
CPSF4L
SOAT2
IGFBP6
CNTN1
UBE2I
NCOA7
DMBX1
ARID3C
DCTN3
SALL1
UNKL
C16orf91
TPRA1
MCM2
RPN1
CDC42EP2
GADD45GIP1
NUTM2D
FRG2
GORAB
HOXB1
HOXB3
HOXB4
SCGB1A1
SMC6
GEN1
ZNF585B
ZNF383
PDE6B
MUSTN1
ITIH4
HOXD3
HOXD4
ERRFI1
RBBP7
PRRX1
TBC1D8
PSMB5
SPACA1
PDE12
WDR59
DDAH1
CCN1
SKIL
TESC
CDH18
ME3
RAI14
DLX4
GAD2
HNRNPA3
SYBU
FXYD2
DSCAML1
MRTO4
EMC1
HHIP
USP29
CCDC200
FKBP1A
FJX1
DIPK1B
TIGD1
EIF4E2
C8B
TMSB15B
ECEL1
OR10AC1
PDHB
HOXA1
HOXA2
ALKBH5
DUSP6
CNPY2
FGF19
GTF3A
HES7
ALOXE3
METTL24
PLAGL1
UNCX
KDM2B
PCBD2
NEK3
FOXA2
SALL4
ZNF746
AQP6
KIF26A
PDHX
APIP
CADM3
HNRNPA2B1
CBX3
ZFX
DEFA5
EIF2S3
RBPJ
GATA6
PTGR1
CATSPERG
OTX1
SNAPC1
HSPA1L
HSPA1A
GPR20
LAMA4
EVA1A
FAM214B
STOML2
PIGO
CBFA2T2
LHPP
KRT16
COL17A1
ADGRL2
CALCOCO1
MUC20
RPH3A
ZGPAT
ARFRP1
REV3L
ASB6
STRA6
CECR2
FABP7
TMEM107
PDPN
CDON
HOXB8
HOXB7
HOXB6
KLF17
EIF2S1
ATP6V1D
ANK2
METTL11B
NOXO1
B3GALT5
SYNGR3
GFER
GFRA3
ZADH2
TSHZ1
GTF3C4
DDX31
AXDND1
LRIG1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CYP51A1
TLE4
BFSP1
TMEM14A
PPP2R5A
MDFIC
MYO10
TTC13
CAMTA1
CLGN
GNAI1
ZFHX4
TRIM65
MRPL38
MBNL3
THRA
RPS24
POLR3A
HNF1A
VOPP1
ALDH1A2
NRXN2
FOXP1
REC8
SNCG
MMRN2
CLMP
ZNF214
NLRP14
FOXB1
H2BU1
H2AW
GNB2
ACTL6B
KLHDC8A
HOXC6
ID1
HOXC5
CDH16
CXCL12
KCNN4
NFE2
CNTN4
DHX32
KIAA0895
TMPPE
GLB1
UBR2
PPFIBP2
ADM
RARB
FRMD7
LRGUK
OPLAH
MSX1
LIG3
LBX1
RIPOR2
P2RX6
MEIS3
MEIS2
GUCY1A1
STK38
LIMCH1
DDX3X
LIN28B
PCDH11Y
SOX6
TPST2
C8orf34
NEK7
ABCB5
PAX3
EVX1
TEX30
TLE3
HOXA5
AGO1
C6orf132
HOXA6
LOXL4
PALM2AKAP2
ITGB6
LRIG3
POU3F2
LRRC4
DTX4
TLN1
CREB3
ALOX5AP
CD99L2
CPLX1
CPN2
CLDN11
DAAM1
SOX21
CSTF2T
TRABD2B
TPH2
TCF4
QPRT
FREM1
EIF4E3
ZNF367
PANK2
ADAMTS18
TYRO3
H2BC17
H2AC17
H3C12
CDCA7
RARA
KAZALD1
TMA16
SOX12
SH2D3C
BNIP2
SCARF2
RGS12
GDNF
METRN
ANTKMT
CCDC78
ARHGAP24
BRWD1
HSPB8
USP17L21
USP17L20
USP17L12
USP17L22
PJA2
PLEKHA5
C5orf63
PAX8
DHRS4L1
EFNA5
GAS1
DAPL1
TDG
C12orf73
DLG4
ACADVL
PNKD
ADO
SMARCA2
SOCS3
TTLL6
NR4A2
PRDM12
PCBP4
GPR62
CD82
THEMIS
RPS10-NUDT3
RPS10
SLC44A3
USP17L13
USP17L11
USP17L18
USP17L10
SNX1
CIAO2A
TTI2
NEDD9
FAM107A
NELFA
MSI1
ID2
BBS9
S100A10
TLE2
CDCA7L
CDC73
SP2
ANKLE2
CITED2
ID3
SP5
MYLK4
ARID3B
FOXP2
NOTCH2
MAB21L2
GATA4
GPR108
TMEM70
ELOC
MYRIP
MTRNR2L2
MSH3
DHFR
NFIA
TRIP10
SMPDL3A
HOXC4
MRPL3
CCNDBP1
POP5
GRSF1
IL23R
ARSG
PDE4DIP
EXOC2
RUNX1T1
SPATC1L
CYP26A1
MSX2
DMRT3
MTRNR2L1
RPL34
KMT2A
MRPL34
DDA1
ABHD8
TBX3
ZNF652
SH3BP2
RASSF2
IFI16
IER3
FLOT1
LPIN1
PARP11
NDUFS7
SH2B1
INAFM2
BRINP1
SPCS1
GLT8D1
FGR
PYDC5
PKDCC
METTL3
SH3BP1
PLEKHO2
MBD2
CBX4
DHRS3
DBX1
RNF149
PDP2
UPF3A
CS
ERLIN2
TAF12
LYL1
HIP1
PRDM6
MVB12A
KDM6B
KAT6B
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PHC2
ETFBKMT
ARID5A
LIN28A
ABCG2
SRSF11
LRRC40
TLE1
SEC14L1
NEO1
EAPP
ZFHX3
KCNAB2
JAK3
PDZRN3
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
FBXL18
VIP
HNRNPD
FRAT2
RPS6KA1
SASH3
NRROS
C11orf24
MRS2
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
KMT2E
KIF21B
NCOR2
KDM3A
GRHL3
PRDM10
SLC7A5
UBXN10
PLA2G2C
ERCC1
RASA4
CCDC88A
SPECC1
RASL12
KBTBD13
LYPD1
ARHGEF10L
NADK
ACTB
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
DGKZ
ENO1
WDR6
HAND1
NBEAL2
CCDC12
BIN2
PSTPIP1
SKIV2L
NELFE
AMD1
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
KITLG
MEOX1
OTUD7B
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
SMURF1
CCDC114
GGCT
CD79A
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
MEF2C
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
ACSS3
NEBL
HOXC8
VAV1
SH2D3A
KHDRBS1
MXI1
SLC2A9
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
DIAPH3
CNOT2
IMPG1
POLD2
IRX5
CBFA2T3
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
MNT
NFKBIA
IQCH
DMD
CRABP2
AAGAB
RXRA
ZNF414
LDLRAP1
ZFYVE28
CFAP99
CD38
INAVA
BCL3
CPVL
CHN2
BNC2
SKI
HEBP2
TRERF1
CMTR1
HOXB5
TUBB
RAC2
MDC1
FTL
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
SYNPO
POLR2J3
GPAA1
EXOSC4
RNASEH2B
MINDY2
SCAMP4
NDRG1
ADAT3
MYO1G
NTRK2
CREB5
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
MYO1B
H6PD
PPIB
PTK2B
DISP2
ARHGEF1
TNFRSF19
RAB11B
NDFIP2
KBTBD11
COL23A1
MAPKAPK3
CISH
KCNIP4
RYBP
COL11A2
ADGRG5
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
AGTRAP
PLCB2
CDK5R1
SEPTIN4
BAX
USP3
NKIRAS1
GFI1
BST2
ERI3
MYO1F
PDE4D
ADCY7
RPL22
RNF207
PCTP
NAA80
IFRD2
HYAL3
PEX14
KCNH2
DFFA
TMEM275
YTHDF2
FAM120B
CEP41
HMGCS1
PRDM1
NAA10
ARHGAP4
CLDN9
PPCDC
ZNF397
LRCH4
FBXO24
ELANE
CFD
MRPS24
THRAP3
SLC35E2B
DLG2
HESX1
PXYLP1
NOTUM
TBRG4
ADORA2A
HIBADH
CYP2E1
CCND3
RABGAP1L
NDUFV1
ARIH2
TXNRD1
TUBB3
NR1D2
MC1R
RNF139
SH3TC1
HNRNPF
TMEM9
STAT1
EVX2
CYCS
TAF15
ZDHHC4
C1orf105
GSPT1
RNF166
CTU2
DGAT2
IGF2BP3
SYTL1
SYTL3
CRYBG1
SP7
DYNLL1
NECTIN1
MECOM
MAGIX
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
SCNN1A
LTBR
DPP9
RNPEPL1
DUSP28
ANKMY1
CLIC4
PTP4A2
SEMA6D
NR2C1
LAT2
CPT1A
ABHD17A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
CHRND
SEC22B
DHX16
DTNB
SP1
ATXN1L
SLC35E2A
CYTH4
MYEOV
FOS
PTGES3
RBL2
FAM118A
SRPRA
GAS7
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
VGLL4
SMUG1
FAF2
NXPH4
C12orf50
C12orf29
ZNF3
COPS6