ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584302 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
SP5
RABL2A
DUX4
POLR3F
DZANK1
MBTPS1
ZNF503
MAPKAPK5
LEFTY2
DUSP29
CACTIN
NUP85
NME6
LOC102724770
DGCR6
PSMG2
CEP76
HSPA9
IPO13
NVL
PSMD1
POLR2E
GPX4
TAOK3
SUDS3
RWDD1
PHOX2B
NEUROG2
LARP7
VDAC2
C19orf48
DYNC1LI2
SLC35B1
NDUFA4
EXOSC5
BCKDHA
ZNF576
IRGQ
FARSB
TSN
DCTN1
TBCK
AIMP1
VTI1B
GOSR2
UPF2
FAM187A
EFTUD2
CCDC103
RPL21
NUP205
PMAIP1
ANAPC7
REXO1
ATP5MG
S1PR4
NCLN
ACTR10
PALM2AKAP2
NNAT
BLCAP
CAPRIN1
NR2F1
STAM
MRPS7
MIF4GD
GGA3
SEC61B
ALG2
PNO1
HADHB
HADHA
SKP1
STAM2
MSX1
RPL35A
IQCG
LMLN
DPH6
PI4KB
GRSF1
PES1
TMED1
COX7A2L
CNTN1
SRD5A1
SMC6
GEN1
PAK1IP1
C6orf52
GOLGA5
ZP4
RBKS
BABAM2
TSNAX
LYRM4
FARS2
TTC8
RBBP5
FRG2C
UBE2I
MRPS5
SART3
ISCU
PSMD12
ICE1
UFM1
TCF7L2
PCBP1
PDAP1
BUD31
PAF1
RPS12
RPS23
ATP6AP1L
SF3B3
COG4
USP1
RPS27A
CLHC1
SMC2
PROSER1
NHLRC3
FAM104A
C17orf80
ZRANB2
SELENOF
HS2ST1
SUPV3L1
VARS1
PPP1R1B
CDH18
RABGGTB
KANK4
TM9SF1
IPO4
TSSK4
SFI1
EIF4ENIF1
ARHGAP10
PRRX1
PRSS56
CHRND
GRIP1
ICMT
HES3
ADK
AP3M1
C6orf47
BAG6
APOM
MBNL1
HSPA1B
PIN4
NEUROG3
PTGES2
FRG2
PIP4P1
OSGEP
APEX1
SPECC1
BICRA
XPNPEP3
ST13
DNAJB7
NFKBIL1
DDX39B
ATP6V1G2
ECEL1
NHS
ALDH1A2
STK36
RNF25
HES7
ALOXE3
OR2L13
OR2AJ1
FMNL2
PAX6
SIX1
COMMD1
CCT4
RPS29
LRR1
CCDC33
GATA6
MESP1
OR6B2
NDUFA10
MBNL3
FBXL18
ACTB
PDE6B
TTC13
MSGN1
EXT1
ARF1
LZTS1
OAZ3
MRPL9
SUCLG1
NEUROG1
ATOH1
PDZD2
PTPRB
ID2
ADGRL2
H2BC17
H2AC17
H3C12
GADD45GIP1
DEFB106B
DEFB106A
DEFB105B
DEFB105A
DEFB104B
DEFB104A
GLRA1
OTX1
FOXP4
TLE3
ABLIM3
TMEM212
CDX1
ARHGAP11A-SCG5
ARHGAP11A
SERINC5
TAF9
RAD17
AK6
GADD45G
ZGPAT
ARFRP1
FOXB1
ZFHX2
EOLA2
CERS6
KHDRBS1
CR1L
ZNF608
ZSWIM6
MUC12
MYC
UNC5A
RPL7
RDH10
ZNF585B
ZNF383
SLAMF8
SEC11C
FOXA2
STK38L
MAGIX
URM1
SLC39A8
ID3
STK38
CNPY2
HOXA3
HOXA4
KRT20
IRX5
KCNJ5
IGFBP2
SRCIN1
SLC39A7
RXRB
HSD17B8
COL11A2
RING1
PBX3
POU3F2
TMPPE
GLB1
LYPD6B
RPN1
NEBL
EIF2S3
SHMT2
CDC73
GDNF
SP8
EBP
MRTO4
EMC1
CHODL
CCDC200
PDHX
APIP
HOXB3
CLGN
HOXB4
HNRNPA3
HOXB2
ANKLE2
KLF17
SMPD1
KLHL25
PITX2
CPSF4L
CDC42EP2
APBA1
COQ3
CDON
HOXB1
NAV3
SCN2A
SKIL
MSX2
TBX3
VENTX
GPR78
UTF1
CADM3
HOXD3
HOXD4
ETS1
PFKP
CACNA1D
BNIP2
KCNH1
RFX2
GAD2
NKD1
DKK1
GTF3C4
DDX31
NRXN2
USP17L21
USP17L20
USP17L12
USP17L22
PDPN
ST18
GSPT1
HOXA1
HOXA2
SNCG
MMRN2
GORAB
USP17L13
USP17L11
USP17L18
USP17L10
KDM2B
COLCA2
GIMAP5
CBX4
KRT74
TLE2
NKX2-2
IPO8
PDE12
EYA1
MEIS3
LRATD2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PTGES3
METTL11B
ZNF746
USP17L17
USP17L19
PAX2
FOSB
NFE2
USP17L15
FGFR2
CSTF2T
SOST
H2BU1
H2AW
ASIP
OR13A1
ALKBH5
FTL
BAX
SP7
NR4A2
GATA3
MEIS2
LRGUK
PSMB5
DMBX1
SYBU
CBFA2T2
RPS24
POLR3A
PAX8
ATP1A4
ITGB5
DDAH1
CCN1
TPRA1
MCM2
PRUNE2
FABP7
HERPUD1
MPP4
OLFML2A
NR6A1
WASHC3
LIFR
CTXN3
SPCS1
GLT8D1
UQCC2
CLDN9
TMEM123
CLDN6
AEN
CCDC9
FAM3C
TTYH1
BUB1
DEFA5
REC8
CWC22
FKBP1A
CPN2
DPEP1
HES1
CPVL
CHN2
CCDC85A
TMEM107
ECM2
AGO1
UNC5C
PRICKLE1
CDT1
PIEZO1
FXYD2
MYRIP
DSCAML1
LZTFL1
FGF2
PCBD2
KCNN2
PPM1B
EML4
CERCAM
HAO1
LEF1
SH2D3C
RAB11FIP1
TMEM120B
RBFOX2
ABCA5
NECTIN1
WNT1
VOPP1
MSI2
FOXB2
DLL4
ADNP2
MN1
HAPLN1
EIF2S1
ATP6V1D
GPR20
ADO
MVB12A
BST2
EVX1
CDK15
THEG
CDX2
FZD8
VEZT
FGD6
G6PC2
PLAGL1
BNIP3
LBX1
NEUROD1
DUSP6
RARB
INSM1
BBS9
ZFHX4
ARID3C
TPM1
S100A10
RHBDD3
EWSR1
UNKL
DCTN3
CALCOCO1
SOAT2
IGFBP6
DAPL1
MUC20
CDCA7L
C16orf91
ITGB6
SP2
UNCX
DLX4
PDHB
CITED2
RARA
TLE4
MYLK4
RBPJ
ARID3B
FOXP2
ANK2
FGF19
NOTCH2
MAB21L2
ASXL3
HOXC6
ME3
FAM222A
ID1
KCNN4
GATA4
RGS12
GPR108
TMEM70
ELOC
FOXP1
MALRD1
PAH
ASCL1
MTRNR2L2
MSH3
DHFR
TRIM65
MRPL38
NFIA
ERRFI1
RBBP7
TRIP10
SMPDL3A
METTL24
HOXC4
MRPL3
CCNDBP1
POP5
IL23R
RIMKLB
IL17RD
KAZALD1
ARSG
KDM8
PDE4DIP
EXOC2
PPFIBP2
RUNX1T1
SPATC1L
CYP26A1
SNAPC1
NCOA7
LAMA4
DMRT3
MTRNR2L1
PRDM12
RPL34
TRABD2B
HOXA5
KMT2A
MRPL34
DDA1
ABHD8
HOXC5
FRMD7
ZNF652
SH3BP2
BFSP1
RASSF2
IFI16
IER3
FLOT1
LPIN1
PARP11
EVA1A
NDUFS7
SH2B1
INAFM2
BRINP1
NEK3
FGR
PYDC5
PKDCC
METTL3
SH3BP1
PLEKHO2
MBD2
DHRS3
ARHGAP24
DBX1
AXDND1
RNF149
PDP2
TMEM14A
UPF3A
SCGB1A1
SULF1
CS
ERLIN2
TAF12
OR10AC1
LYL1
C5orf63
HIP1
PRDM6
RPS10-NUDT3
RPS10
KDM6B
KAT6B
HNRNPA2B1
CBX3
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PHC2
PANK4
HES5
GTF3A
ETFBKMT
ARID5A
TESC
LIN28A
NELFA
ABCG2
SRSF11
LRRC40
TLE1
SEC14L1
RAI14
NEO1
EAPP
ZFHX3
KCNAB2
JAK3
PDZRN3
HSPA1L
HSPA1A
NUTM2D
TBC1D10C
PPP1CA
PARK7
MYBPC3
CCPG1
C15orf65
TDG
C12orf73
VIP
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
NOXO1
SASH3
NRROS
C11orf24
MRS2
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
KMT2E
KIF21B
NCOR2
KDM3A
GRHL3
PRDM10
SLC7A5
UBXN10
PLA2G2C
TBC1D8
ERCC1
RASA4
CCDC88A
RASL12
KBTBD13
LYPD1
BRWD1
ARHGEF10L
NADK
CATSPERG
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
DGKZ
PAX3
ENO1
WDR6
HAND1
COL17A1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
AMD1
SIRT4
ING1
CARS2
EFHD2
FAM110A
KITLG
MEOX1
OTUD7B
ADM
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
CLDN11
MAGEA11
REV3L
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
SMURF1
CCDC114
NEK7
GGCT
CD79A
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
MEF2C
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
ACSS3
HOXC8
VAV1
SH2D3A
SOX21
MXI1
SLC2A9
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
ZNF367
DIAPH3
DDX3X
CNOT2
IMPG1
POLD2
LIG3
CBFA2T3
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
ASB6
MNT
NFKBIA
IQCH
DMD
CRABP2
AAGAB
TYRO3
RXRA
ZNF414
LDLRAP1
ZFYVE28
CFAP99
ZDHHC1
CD38
INAVA
BCL3
BNC2
SKI
HEBP2
TRERF1
CMTR1
TPST2
HOXB5
TUBB
RAC2
MDC1
DTX4
LRIG3
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
MINDY2
SCAMP4
NDRG1
ADAT3
SMARCA2
MYO1G
NTRK2
CREB5
DIPK1B
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
CLDN2
AQP6
MYO1B
H6PD
PPIB
PTK2B
DISP2
ARHGEF1
TNFRSF19
RAB11B
NDFIP2
KBTBD11
COL23A1
MAPKAPK3
CISH
KCNIP4
RYBP
GUCY1A1
ADGRG5
SHB
ANKRD1
SMARCD2
SMAD3
GALNT10
AGTRAP
PLCB2
CDK5R1
SEPTIN4
USP3
NKIRAS1
GFI1
ERI3
MYO1F
PDE4D
ADCY7
RPL22
RNF207
PCTP
NAA80
IFRD2
HYAL3
PEX14
KCNH2
DFFA
TMEM275
YTHDF2
FAM120B
CEP41
HMGCS1
PRDM1
NAA10
ARHGAP4
CYP51A1
PPCDC
ZNF397
LRCH4
FBXO24
ELANE
CFD
MRPS24
THRAP3
SLC35E2B
DLG2
HESX1
PXYLP1
PPP1R1A
NOTUM
TBRG4
ADORA2A
HIBADH
CYP2E1
CCND3
RABGAP1L
NDUFV1
ARIH2
TXNRD1
TUBB3
NR1D2
MC1R
RNF139
SH3TC1
HNRNPF
TMEM9
STAT1
EVX2
CYCS
TAF15
ZDHHC4
C1orf105
RNF166
CTU2
DGAT2
IGF2BP3
CNTN4
SYTL1
SYTL3
CRYBG1
DYNLL1
B3GALT5
MECOM
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
SCNN1A
LTBR
DPP9
RNPEPL1
DUSP28
ANKMY1
MDFIC
CLIC4
PTP4A2
SEMA6D
NR2C1
LAT2
CPT1A
ABHD17A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
SEC22B
KIF26A
DHX16
DTNB
TTI2
SP1
ATXN1L
SLC35E2A
CYTH4
MYEOV
FOS
ZFX
RBL2
FAM118A
HNF1A
SRPRA
GAS7
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3