ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584312 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◣ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

DUX4
LOC102724770
DGCR6
PSMD1
TAOK3
SUDS3
ZNF335
RABL2A
RABL2B
NME6
POLR3F
DZANK1
CACTIN
MAPKAPK5
DYNC1LI2
NUP85
RWDD1
PSMG2
CEP76
VDAC2
MRPS7
MIF4GD
GGA3
DCTN1
HSPA9
TBCK
AIMP1
FRG2C
FARSB
FAM187A
EFTUD2
CCDC103
IPO13
ZNF576
IRGQ
RPL21
VTI1B
EXOSC5
BCKDHA
ZNF503
TSNAX
HADHB
HADHA
REXO1
POLR2E
GPX4
SEC61B
ALG2
STAM
C19orf48
SKP1
NUP205
GOSR2
UPF2
RBBP5
ANAPC7
STAM2
TTC8
S1PR4
NCLN
ARF1
LYRM4
FARS2
CAPRIN1
NVL
COX7A2L
PAK1IP1
C6orf52
PROSER1
NHLRC3
SRD5A1
RHBDD3
EWSR1
SUPV3L1
HOXA3
HOXA4
PNO1
DPH6
ATP5MG
ACTR10
ADK
AP3M1
PES1
SELENOF
HS2ST1
SMC2
PIP4P1
OSGEP
APEX1
NNAT
BLCAP
SLC35B1
RABGGTB
HSPA1B
TMED1
WNT1
FRG2
TLE1
PI4KB
RPS23
ATP6AP1L
RPS12
NEUROD1
USP1
MRPL3
SF3B3
COG4
ZRANB2
PPP1R1B
MRPS5
PDAP1
BUD31
RBKS
BABAM2
RND3
ICE1
UFM1
RPS27A
CLHC1
PSMD12
KITLG
SFI1
EIF4ENIF1
DMRT3
TSN
SART3
ISCU
RPL35A
IQCG
C6orf47
BAG6
APOM
NCOR2
ZNF608
COMMD1
CCT4
FZD8
MSX1
GRIK2
RPS29
LRR1
GOLGA5
FABP7
SMPDL3A
UBE2I
XPNPEP3
ST13
DNAJB7
PAF1
PLAGL1
G6PC2
CALCOCO1
SOGA3
ABCG2
LAMA4
ARHGAP22
MYLK4
NDUFA4
KCNK16
LZTS1
VARS1
PKHD1
MSX2
PCBP1
ZFHX4
SERINC5
RPL34
PARP11
BICRA
FGD3
RAB11FIP1
TM9SF1
IPO4
TSSK4
C1orf105
LAMB4
SH3BP5
OR6B2
NDUFA10
MUC20
HOXA5
PAM
SEMA4D
CABP7
PAX3
FGF19
EVX2
ARHGAP11A-SCG5
ARHGAP11A
FAM104A
C17orf80
GMPR
ARHGAP24
ANK2
ALDH1A2
DHRS3
SPRR1A
MYH2
DDAH1
CCN1
QPRT
PTGES2
SHF
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
USP17L21
USP17L20
USP17L12
USP17L22
KCNK10
POU2F2
NFIA
EIF2S3
LRATD2
MTRNR2L1
ACSS3
CCDC200
CBFA2T2
GUCY2C
RARA
SDK2
MRTO4
EMC1
SUCLG1
SGPP2
KBTBD8
LARP7
UNCX
SEC11C
PDE1B
PALM2AKAP2
TRABD2B
CHODL
SMUG1
TRMT9B
CACNA1D
CD69
PDE6B
TMEM72
CHD7
LRRC10
SPARCL1
SYNPO
GALNT14
TLE4
RFX2
ATOH8
WDPCP
HOXB1
CITED2
BRINP1
ITGB6
HOXB3
HOXB4
PIN4
FOXB2
HSPA6
USP17L13
USP17L11
USP17L18
USP17L10
COL17A1
C10orf90
CA2
TPO
GAS2L3
SKIL
PIGX
CEP19
HES1
NR2F1
NEUROG1
LRIG3
HMX2
BUB3
CEBPA
SMARCA2
ZNF775
MEF2C
WBP1L
PDHB
CLDN11
PDE1A
GNG12
PDE4DIP
PDZRN3
RPL7
RDH10
RGS3
TMEM120B
MED4
IKBKB
FRMD4A
CCDC198
SLC2A9
SLA
GTF3C4
DDX31
TRPM3
LMLN
NEUROG2
NEUROG3
DUSP29
ICMT
HES3
MBTPS1
NFKBIL1
DDX39B
ATP6V1G2
CDX2
ARHGAP10
VEZT
FGD6
PMAIP1
HOXA1
HOXA2
TAF9
RAD17
AK6
ZP4
ATOH1
STK36
RNF25
GLRA1
ZGPAT
ARFRP1
BNIP3
PDE12
LBX1
IGFBP2
GADD45GIP1
DUSP6
OAZ3
MRPL9
ID2
RARB
CCDC33
INSM1
BBS9
LEFTY2
ETS1
NHS
ADNP2
ARID3C
TPM1
S100A10
UNKL
URM1
CNPY2
DCTN3
SOAT2
IGFBP6
PCBD2
DAPL1
FXYD2
TLE2
CDCA7L
PDHX
APIP
C16orf91
CDC73
RPN1
DLL4
PHOX2B
SP2
ANKLE2
ST18
DLX4
ZNF585B
ZNF383
GORAB
PRUNE2
SYBU
PRRX1
ID3
ECEL1
SP5
TPRA1
MCM2
CERCAM
RBPJ
ARID3B
FOXP2
TMEM107
NOTCH2
MAB21L2
NFE2
ASXL3
CDH18
NAV3
KDM2B
TLE3
ZNF746
HOXC6
CLGN
ME3
FAM222A
ID1
KCNN4
MEIS2
CNTN1
GATA4
RGS12
GPR108
TMEM70
ELOC
FOXP1
MALRD1
MYRIP
PAH
ASCL1
MTRNR2L2
MSH3
DHFR
ALKBH5
TRIM65
MRPL38
DSCAML1
ERRFI1
RBBP7
TRIP10
METTL24
GADD45G
HOXC4
CCNDBP1
POP5
GRSF1
IL23R
DMBX1
RIMKLB
IL17RD
KAZALD1
ARSG
KDM8
EXOC2
PPFIBP2
RUNX1T1
CR1L
SPATC1L
CYP26A1
SNAPC1
NCOA7
PAX6
PRDM12
KMT2A
HOXD3
MRPL34
DDA1
ABHD8
OTX1
TBX3
HOXC5
FRMD7
ZNF652
SH3BP2
BFSP1
RASSF2
IFI16
IER3
FLOT1
LPIN1
EVA1A
NDUFS7
SH2B1
INAFM2
NEK3
TCF7L2
SPCS1
GLT8D1
FGR
PYDC5
PKDCC
METTL3
SH3BP1
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
FKBP1A
DBX1
AXDND1
RNF149
PDP2
TMEM14A
UPF3A
SCGB1A1
SULF1
CS
ERLIN2
METTL11B
PSMB5
ABLIM3
TAF12
OR10AC1
LYL1
C5orf63
HIP1
PRDM6
MVB12A
RPS10-NUDT3
RPS10
KDM6B
KAT6B
VOPP1
HNRNPA2B1
CBX3
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PHC2
PANK4
HES5
GTF3A
ETFBKMT
ARID5A
TESC
LIN28A
RPS24
POLR3A
NELFA
SRSF11
LRRC40
TMEM212
SEC14L1
RAI14
NEO1
STK38
EAPP
ZFHX3
KCNAB2
JAK3
HSPA1L
HSPA1A
NUTM2D
TBC1D10C
PPP1CA
CADM3
PARK7
MYBPC3
CCPG1
C15orf65
TDG
C12orf73
FBXL18
VIP
TIGD1
EIF4E2
HNRNPD
FRAT2
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
MRS2
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
SNCG
MMRN2
KMT2E
KIF21B
HOXD4
KDM3A
GRHL3
PRDM10
SLC7A5
UBXN10
PLA2G2C
TBC1D8
MBNL3
ERCC1
RASA4
PAX8
CCDC88A
SPECC1
RASL12
KBTBD13
LYPD1
BRWD1
ARHGEF10L
NADK
CATSPERG
ACTB
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
DGKZ
ENO1
WDR6
KLF17
HAND1
FOXB1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
AMD1
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
MEOX1
OTUD7B
ADM
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
REV3L
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
SMURF1
CCDC114
NEK7
GGCT
CD79A
ZNF76
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
NEBL
NRXN2
HOXC8
VAV1
SH2D3A
KHDRBS1
SOX21
MXI1
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
ZNF367
DIAPH3
DDX3X
CNOT2
REC8
IMPG1
POLD2
IRX5
LIG3
CBFA2T3
GATA6
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
ASB6
MNT
NFKBIA
IQCH
DMD
CRABP2
AAGAB
TYRO3
TTC13
RXRA
ZNF414
LDLRAP1
ZFYVE28
CFAP99
ZDHHC1
CD38
INAVA
BCL3
CPVL
CHN2
BNC2
SKI
HEBP2
TRERF1
CMTR1
TPST2
HOXB5
TUBB
RAC2
MDC1
DTX4
FTL
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
POLR2J3
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
MINDY2
SCAMP4
NDRG1
ADAT3
MYO1G
NTRK2
CREB5
DIPK1B
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
CLDN2
AQP6
MYO1B
H6PD
PPIB
PTK2B
PDPN
DISP2
ARHGEF1
TNFRSF19
RAB11B
ADGRL2
NDFIP2
KBTBD11
COL23A1
MAPKAPK3
CISH
KCNIP4
RYBP
H2BU1
H2AW
GUCY1A1
COL11A2
ADGRG5
SHB
CDX1
ANKRD1
SMARCD2
SMAD3
GALNT10
FOXA2
AGTRAP
PLCB2
CDK5R1
SEPTIN4
BAX
USP3
NKIRAS1
GFI1
BST2
ERI3
MYO1F
PDE4D
ADCY7
RPL22
RNF207
PCTP
NAA80
IFRD2
HYAL3
PEX14
KCNH2
DFFA
TMEM275
YTHDF2
FAM120B
CEP41
HMGCS1
PRDM1
NAA10
ARHGAP4
CYP51A1
CLDN9
EVX1
PPCDC
ZNF397
LRCH4
FBXO24
ELANE
CFD
MRPS24
THRAP3
SLC35E2B
DLG2
HESX1
PXYLP1
PPP1R1A
NOTUM
TBRG4
ADORA2A
HIBADH
CYP2E1
CCND3
RABGAP1L
NDUFV1
ARIH2
TXNRD1
TUBB3
NR1D2
MC1R
RNF139
SH3TC1
HNRNPF
TMEM9
STAT1
CYCS
TAF15
ZDHHC4
GSPT1
RNF166
CTU2
DGAT2
IGF2BP3
CNTN4
SYTL1
SYTL3
CRYBG1
SP7
BNIP2
DYNLL1
NECTIN1
B3GALT5
MECOM
MAGIX
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
CDC42EP2
ARID2
SCNN1A
LTBR
DPP9
RNPEPL1
DUSP28
ANKMY1
MDFIC
CLIC4
PTP4A2
SEMA6D
NR2C1
LAT2
CPT1A
ABHD17A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
CHRND
SEC22B
KIF26A
DHX16
DTNB
TTI2
SP1
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
LRGUK
ZFX
RBL2
FAM118A
HNF1A
SRPRA
GAS7
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
HHIP
VGLL4
PCDH11Y
FAF2
NXPH4
C12orf50
C12orf29
ZNF3
COPS6
WT1
CXXC4
SOCS3
SMIM3
ARMC12
UPP1
CASC3
CALM2
ZNF341
CD164
CTTN
SLC39A13
SLAMF8
ELMO1
LIX1
TYROBP
NFKBID
HCST
ANKRD13D
SLC25A6
TRMT6
SEBOX
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
USP17L17
H2BC17
H2AC17
BAZ1B
KIF5C
ZSWIM1
SPATA25
NEURL2
CTSA
KLHL7
RHBDF2
EFNB2
LAPTM5
PRRC2A
AIF1
USP42
DOT1L
SHC1
NR4A2
MYADM
NOTCH2NLB
NOTCH2NLA
EIF1B
UNC13D
STX18
SLC3A2
CD151
SLC10A2
SBNO2
CLTC
PIP4P2
ARHGAP45
ASB1
MAP2K1