ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
ING1
CARS2
MRPS28
RNASE6
EDDM3B
PXYLP1
NDUFS7
CBX5
HNRNPA1
CNOT2
OTUD7B
RBKS
BABAM2
POLD2
RARG
ZBTB7C
ZNF775
FRMD7
SMARCD2
KANSL3
FER1L5
NFE2
ITFG2
ZCCHC24
ATXN1L
ZNF827
GPRC5A
REEP6
PCSK4
TAF1A
DONSON
FTL
BAX
PKN2
CLK1
METTL3
HORMAD1
WDR7
IER3
FLOT1
TUBB
MDC1
RAE1
MTRNR2L3
RPGRIP1
ZFP36L1
MTRNR2L2
MSH3
DHFR
CAPN1
GATD3B
GATD3A
SYTL3
DYNLT1
KDM3A
ZGPAT
ARFRP1
NANP
CCDC174
VEGFB
LOC114841035
FKBP2
PPP1R14B
STX18
MBD2
RASA4
KDM6B
ASNSD1
ASDURF
GPR108
TRIP10
MAMLD1
EIF5
CTF1
BCL7C
MAML3
NR2C1
KIF5C
MTRNR2L8
PDE6B
RASA4B
NUDT15
UQCR11
PHB2
ZNF395
BACE2
USP42
RARA
SKIDA1
MLLT10
SLC10A5
IMPA1
C19orf12
HECTD4
CTBP2
UROS
BCCIP
MTRNR2L1
KLK9
KLK11
KLK10
ARHGAP12
TRMT1L
SWT1
LIPA
TRIP12
FBXO36
USP1
PTGES3
TMEM241
RNASE4
ANG
NEK1
CLCN3
ARHGEF35
STAT2
APOF
FAAP24
CEP89
DUS1L
SNRPA
C19orf54
MPZL1
CTSW
EFEMP2
DPH2
B4GALT2
ATP6V0B
KRT19
KRT15
ANTXRL
NCOA7
CFAP69
PMPCB
SMIM3
AZGP1
DNAJC16
CASP9
PPP2R5A
PLEKHA8
ANKS1B
ARHGEF5
MIGA1
TRABD
RIPPLY2
CYB5R4
MRPS31
DUX4
CPNE6
TEX264
CBR4
INTS5
GANAB
SLC29A2
S1PR4
NCLN
SEPTIN2
HDLBP
NAGLU
UQCRC2
FOXP1
PPP1R13B
USP37
CNOT9
SZT2
MED8
PDCL
RPL37
CARD6
COL23A1
ALDOA
KMT5A
FXYD3
SREBF1
MED9
RPL22
RNF207
SMIM20
FAM78B
GMNN
CDC20
BAZ1B
DRG1
SLC25A16
CDC42SE2
HGH1
RPLP0
GCN1
PSMB4
SERTAD2
FKBPL
ATF6B
NPNT
COLEC11
CSH2
TSPAN10
NPLOC4
SOAT2
IGFBP6
RASAL1
ZSWIM1
SPATA25
NEURL2
CTSA
NFIC
SENP8
MYO9A
RNF121
LOC100133315
SYTL1
MRPL54
APBA3
RAX2
ZSWIM8
FUT11
CHCHD1
SH3YL1
ACP1
ADAM17
RNF220
PLA2G6
ST8SIA6
TM4SF1
MINDY3
CCDC59
ABCC10
SLC11A2
CAPNS1
C6orf47
BAG6
APOM
TP53INP2
AARS2
TECPR1
MELTF
ABHD3
SH2B1
CCL28
TDG
C12orf73
GDPGP1
CIB1
RGPD2
RGPD1
RPL5
TDRD3
TNPO3
SPIN1
EN1
AFF1
HBP1
COL27A1
KLHDC2
VPS26C
PARP9
DTX3L
SMIM22
ROGDI
FDXACB1
C11orf1
ALG9
MRPS16
DNAJC9
FAM20B
RPS3A
PCTP
TTK
DCPS
VARS1
SOD2
WTAP
FABP5
NAA40
NARS1
TLR5
GPAA1
EXOSC4
MYADM
RPS19
TNFAIP8L2
SCNM1
LYSMD1
KRI1
CDKN2D
ENTPD5
BBOF1
TRIB1
TF
SERPINI1
PDCD10
HDAC9
PCCA
DBP
CA11
ATXN2
NOTCH1
EPM2A
LOC105378979
SEMA4G
PACSIN2
KBTBD3
AASDHPPT
ZNF133
FGF13
ARRDC2
SLC39A9
ERH
CLDN11
SLC30A4
SAMD12
SIPA1
DNAJC27
TAF6L
HCN3
CLK2
RIMS1
POLR2G
ZBED9
ZC2HC1C
ACYP1
TMED5
CCDC18
MKRN3
CDC42EP1
DUSP4
CGGBP1
C3orf38
DHRS3
BRD2
TSPAN6
SRPX2
ARIH2
DCLK1
ZASP
SAP25
SULF2
LCN2
MBD6
DDIT3
CEP70
TRIM38
CDH11
ASB1
KLF5
AP2M1
MIEN1
GRB7
TRIM11
TRIM17
SRCAP
LOC730183
ZNF77
TMED10
PCGF2
MINDY2
UBE2V2
ARID4A
MDM2
DZIP3
CIP2A
PRUNE1
MINDY1
TEX12
BCO2
SLC25A6
DPP9
TRIM54
SLC30A3
DNAJC5G
PSPN
ALKBH7
RBM19
SEC24C
IFT22
ECH1
ZNF318
SP2
SKIV2L
NELFE
H2BC17
H2AC17
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
OR2B2
ACSS3
LRRC1
PTEN
KLLN
SMPD2
PPIL6
CD46
TXNDC11
ESRP1
RPLP1
RPS8
KCNQ4
ZNF746
ATP6V0E2
TCP11
GPATCH8
INPP5K
KAT6B
AP1B1
ETFRF1
CFAP94
MACROH2A1
ZNF384
LEKR1
ODF3L2
MADCAM1
SLC25A35
RANGRF
ZNF85
ANXA7
SEC23A
IGSF10
SNX12
NEPRO
SPATS1
STAM2
ERCC1
LSM8
GBA
CLECL1
NOTCH2
FDX1
MICALL1
URGCP
ADA
OTUD5
URGCP-MRPS24
POMP
KLHL24
TBC1D22A
MAMDC2
CNP
OSGIN2
MRPS36
PIM3
SCAP
AKTIP
CFAP73
OR8B12
HNRNPA1L2
ELOVL4
DLG2
MRPS33
DNAH14
ARHGEF25
DTX3
CNDP2
GRK6
HEXIM1
KLHDC8B
CCDC71
CCDC102A
ADGRG5
GSTT2B
GSTT2
DDTL
DDT
KCTD9
CDCA2
PHGDH
SPAG16
FRG2
TP53INP1
SNRNP35
ZBED6CL
LRRC61
ACTR3C
FRG2C
LARP1
IVNS1ABP
DKC1
MAMSTR
CSTA
CS
POLDIP3
TRIM26
SMAGP
ANAPC15
LAMTOR1
SBNO1
ACBD3
TAOK3
SUDS3
ADM
ZMIZ2
OTUD6B
HIKESHI
KBTBD2
TBC1D8B
WWTR1
TTC28
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
RNF44
CDHR2
BOLA2-SMG1P6
PTBP3
CAND1
PRR3
GNL1
KCNS3
B4GALT6
IQANK1
FAM83H
DYNLL1
SRSF9
HAUS5
CLIP1
RAB3GAP2
ZBTB20
RNGTT
OLFML2A
NR6A1
LUC7L2
SYS1
ESR2
SEC61B
ALG2
FAM178B
ZXDC
ZNF492
ANO1
CXCR4
NFKBIA
SLC25A53
FAM199X
DCAF7
ANO6
OPTN
CCDC3
OPTC
RFLNA
FAM3C
SRSF2
MFSD11
SLC22A4
HIC1
KRT14
RPL34
ZNF446
ZNF324
KMT5C
MED12L
EXD2
TRIM7
TJP3
CCDC120
EPN1
LOXL4
XRCC6
DESI1
CEP78
C16orf70
RAB18
UFD1
CDC45
LEO1
MCOLN1
ZNF358
BAG2
C11orf91
PCDH1
AXDND1
CYP4F11
MGAT1
MROH1
PSMA3
TMEM262
RBM7
C11orf71
PAXBP1
ENOX2
PIK3CG
GTF2H5
QSER1
LMF1
SOX8
EAPP
SRSF3
PITX3
PCARE
IRF9
GBF1
SIRT4
COX5A
MYL12B
MYL12A
TRIM2
PRKD2
NEK2
ZFP41
CLUAP1
C16orf90
NUDT17
MAP4K5
ATL1
PEX2
TMEM167B
STK11
SLC38A1
ZNF563
SLC3A2
MT2A
C12orf65
CLDN15
IRX3
B4GALNT3
SCYL3
ISYNA1
GP9
MFSD8
ABHD18
PCBP2
FZD4
CALM2
CSTB
BBS9
SREBF2
P4HA1
IRAK1
ZNF22
AASDH
DDX1
TMPRSS12
FAM114A1
RNF10
COQ5
UGT1A4
UGT1A3
COMP
KCNN4
PLBD2
CSF3R
DNAJA2
ZBTB44
TMEM79
SMG5
C2orf73
DTX2
SIKE1
FRMD3
OSBPL1A
THAP7
ACADM
DNAH12
ZNF69
EPHA7
HMGN3
NOTCH2NLB
EVL
GFM1
LAMTOR5
OR6B2
NDUFA10
MRPL34
DDA1
ABHD8
MRM1
DHRS11
TSEN34
ENOSF1
CLK4
SLC5A10
SINHCAF
EEF1A1
POMZP3
ST3GAL4
TRAPPC6B
PNN
GNG7
PLEKHG3
MAPT
TENT2
TCF7L2
RAB11FIP2
PELI2
MPZL2
CASD1
FMC1-LUC7L2
FMC1
DCAKD
CLDN7
ZDHHC3
EXOSC7
USF2
DSG2
BCKDK
RPS14
ADRM1
RNF135
AGPAT3
CDC14A
ARHGEF33
CCDC200
KRIT1
ANKIB1
ZNF76
MOG
HSPA6
PRELID3B
PRPSAP1
CD320
AMER1
RNASE1
POLR2B
NOA1
TPD52L2
ABHD16B
UFSP1
ACHE
ZNF891
ZNF10
PSMD14
DYM
OSR1
SQSTM1
DNAJB1
S1PR2
TECR
MYOZ3
CRNKL1
CFAP61
CLDN4
LRRC59
RNF168
NLRX1
SPTBN4
BLVRB
DYRK2
CALML5
SYCP2L
GCM2
CCDC9
HNRNPLL
SNRPD1
WARS2
TMEM209
SSMEM1
TACC2
DTNB
RND3
FEM1A
MRPS18B
ATAT1
STAT1
SCNN1A
LTBR
POLRMT
FGF22
IL25
EFS
HUS1
PNKD
TOE1
MUTYH
CORO1A
SLC4A2
CDK5
NADSYN1
DHCR7
ASIC3
NINJ1
CLDN19
RINL
HEXIM2
ZNF484
PPEF2
SLC30A7
EXTL2
COP1
KIF20A
BRD8
WDR81
TLCD2
OSER1
TAF2
PRCP
DDIAS
ATP1B1
SEMA3E
VAV1
SH2D3A
CCDC130
YIF1B
KCNK6
NOD1
PTBP1
POLG2
DDX5
CYB5A
SNX3
ZBTB45
SLC27A5
ARHGAP35
ELP6
PPM1D
SHPRH
ZBTB7B
LENEP
TAF12
PRKCD
TEAD3
CCDC183
DENND6A
SRSF5
RABL6
ZNF572
SYPL1
SLBP
TMEM129
TACC3
SMG6
PPP1R9B
LGALS2
SUPT7L
SLC4A1AP
RORC
C2CD4D
STK32C
RUFY1
CCDC38
AMDHD1
MTFP1
KRT7
ADCK1
NUP85
HIBADH
NIBAN2
DCAF10
CTNNA1
DSC2
GOLT1A
TXNRD1
PAK4
OBP2B
HMG20B
COMMD3-BMI1
COMMD3
BMI1
FOXJ1
KLHL7
ANKRD50
AQP5
AQP2
GXYLT1
GABARAPL1
RBM15
HINT3
H1-0
GCAT
CDK13
NAGK
SIK3
LTBP3
LZTS2
CYB5R2
PAN2
IL23A
GSPT1
TKFC
DDB1
THUMPD3
HES4
BARX1
ZNF503
CUL5
CBY3
PPIL2
ZNF506
FASTKD2
TMEM53
ARMH1
POLR3B
RPS12
R3HCC1L
SPAG8
HINT2
MDP1
CHMP4A
CRY2
KHNYN
CBLN3
REL
PNISR
STRAP
SYCE1L
MON1B
MARVELD1
IDH3B
ALS2
ZNF675
PGAM1
CYP27C1
RNF19A
SMAD1
CCDC88B
WDR43
FOXJ3
SPEG
AGER
GIT1
ANKRD13B
RNF5
AGPAT1
DMAP1
HLA-E
KHDRBS1
GSE1
UQCRH
LRRC41
KIF22
ITGB3BP
EFCAB7
NR4A1
PLPP2
NDUFV2
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
RWDD1
DYNC1LI2
PSMG2
CEP76
VDAC2
HSPA9
FAM187A
EFTUD2
CCDC103
NVL
VTI1B
NUP205
POLR2E
GPX4
RPL21
TBCK
AIMP1
GOSR2
MRPS7
MIF4GD
GGA3
DCTN1
C19orf48
ATP5MG
EXOSC5
BCKDHA
REXO1
STAM
SRD5A1
SKP1
HADHB
HADHA
TSNAX
FARSB
NNAT
BLCAP
TSN
LYRM4
FARS2
UPF2
PES1
ZNF576
IRGQ
SLC35B1
ACTR10
NDUFA4
PNO1
PAK1IP1
C6orf52
CAPRIN1
DPH6
TTC8
PSMD12
LOC102724770
DGCR6
COX7A2L
GOLGA5
SUPV3L1
RBBP5
SART3