ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◣ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
DUX4
MAPKAPK5
ZNF335
PSMD1
CACTIN
ZNF503
DYNC1LI2
EXOC2
NME6
POLR3F
DZANK1
MAB21L2
RWDD1
TAOK3
SUDS3
PRDM6
PSMG2
CEP76
VTI1B
IPO13
NUP85
FAM187A
EFTUD2
CCDC103
S100A10
VDAC2
NVL
HOXA1
HOXA2
GATA4
STAM2
SKP1
LYRM4
FARS2
HSPA9
S1PR4
NCLN
GOSR2
TBCK
AIMP1
UBXN10
PLA2G2C
UPF2
DCTN1
SRD5A1
POLR2E
GPX4
NUP205
ATP5MG
IMPG1
SP2
CCKAR
IER3IP1
TSN
REXO1
IFI16
PYDC5
EXOSC5
BCKDHA
COX7A2L
MRPS7
MIF4GD
GGA3
SEC61B
ALG2
NNAT
BLCAP
C19orf48
STAM
TSNAX
MRPS5
ACTR10
ICE1
NTRK2
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
PDE4DIP
SUPV3L1
HADHB
HADHA
BBS9
PES1
FAM104A
C17orf80
PAK1IP1
C6orf52
HOXB3
HOXB5
RASL12
KBTBD13
DMD
PI4KB
HAND1
FRG2C
RABGGTB
SFI1
EIF4ENIF1
CAND1
USP1
ZRANB2
MECOM
ZNF576
IRGQ
RPL34
ETFBKMT
XPNPEP3
ST13
DNAJB7
LOC102724770
DGCR6
RBKS
BABAM2
ADK
AP3M1
ANAPC7
UBE2I
SMC2
CELF4
HAND2
SCRG1
TM9SF1
IPO4
TSSK4
MOG
UFM1
RPS23
ATP6AP1L
METTL3
SALL2
LAPTM4B
DPH6
RPS12
RUNX1T1
RPL35A
IQCG
LMLN
CCDC33
LRRN4
NDUFA4
CAPRIN1
SART3
ISCU
ERI3
SF3B3
COG4
CD34
PCBP1
MYO1B
MVB12A
BST2
PAF1
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
NFKBIL1
DDX39B
ATP6V1G2
RBBP5
SUCLG1
CLGN
NFIA
TNC
TMED1
RPS27A
CLHC1
NEO1
LMO4
PIP4P1
OSGEP
APEX1
OR6B2
NDUFA10
SIRT4
C6orf47
BAG6
APOM
TBX3
KITLG
NR2F1
COMMD1
CCT4
OAZ3
MRPL9
TXNDC2
HOXC6
HOXC4
HOXC8
VPS13A
CITED2
DMAC1
RTL1
SFRP1
DDAH1
CCN1
PTGES2
ELOVL6
MEIS2
HEXIM2
PPP1R1B
KDM2B
HOXA3
HOXA4
HSPA1B
HOXA5
PDE12
POLD2
MYL7
CD244
OR5K2
CRABP2
UNC5C
RARB
BICRA
NTAQ1
MRTO4
EMC1
SLC3A2
C10orf82
SHOX2
RSRC1
PRXL2A
ANKLE2
TEX9
RFX7
LOC102723360
MEIS1
PLCZ1
CAPZA3
BRINP1
HES1
PDAP1
BUD31
LIN28A
PLEKHG1
FAM200B
PLEKHF1
NDUFV2
ZAP70
CCR9
LZTS1
GGCT
PLAGL1
CCDC183
TMEM141
STK36
RNF25
TLE3
DACT2
SKIDA1
EIF2S3
PRUNE2
DIAPH3
NUBP1
JUP
PDE6B
CXXC4
MELK
HPCAL4
LIX1
TMEM120B
FOXP1
TAFA3
KRTAP23-1
KRTAP9-7
MGST1
ARID3C
DCTN3
CPA1
ZNF608
PIN4
RPL7
RDH10
CYP26A1
SNCG
MMRN2
FAM205A
ZFHX4
HOXB1
ST3GAL6
GPR84
SKIL
METTL24
SLC19A2
KCNN4
WT1
SSH1
TAF9
RAD17
AK6
ZNF157
TPM1
PPFIBP2
RARA
EMP1
TTI2
P2RX6
SERHL2
CNR1
NXPH2
MRTFB
ADAMTS8
FGF5
ASPG
ZNF3
COPS6
PAX3
ACKR3
ZBED5
FRG2
REEP5
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
HIP1
EXOC1L
ID2
NQO2
ERVW-1
FLVCR1
PAEP
SPATA45
FOXP2
SEH1L
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
MEOX1
TMEM14B
ZGPAT
ARFRP1
CATSPERG
PACRGL
FLRT3
SPECC1L
PGPEP1L
ITPRID1
KIAA1217
KRT24
RPN1
POP5
FYB2
RPLP1
ARHGAP10
FGF7
USP34
LRIG3
SYNE2
ZNF587B
GADD45A
SOX5
KCNJ3
LYPD1
TUBB
MDC1
SEPTIN9
IL23R
TNP1
RBPJ
GC
CNPY2
RPS24
POLR3A
PLCH2
PKDCC
SPTBN1
HOXB8
HOXB7
GOLGA8T
GOLGA8K
TMEM107
BNC2
GK2
SCMH1
SYCP2
PPP1R3D
FAM217B
TXNDC16
GPR137C
C8orf34
SH3RF2
ARF1
ACVR1
MAGEB3
MAGEB2
OLFM1
C4orf54
NDUFS7
HOXC5
TPBGL
CDH18
GPR20
EIF3D
PEDS1-UBE2V1
PEDS1
CFLAR
CCDC200
POLR2D
KDM3A
TXNRD1
KLF9
MME
CYP51A1
ZBTB8OS
RBBP4
PCDH18
GABRB2
PKIG
SERINC3
RPS29
LRR1
RAPGEF3
SLC48A1
PRTG
GAS2
CCDC73
KRTAP13-1
FXYD2
DSCAML1
ZBTB18
GADD45GIP1
HOXD3
PHLDB2
IL6ST
CCNDBP1
HOXA6
AKR1B15
STX11
SLC25A25
PCDH15
SPRR2F
SLC17A4
CCDC174
HLTF
TLE4
ANAPC15
SAMD11
EXPH5
SMAD3
SACM1L
ITGA3
FBXO34
CNTN1
SALL4
AKAP12
CLDN14
GBP3
RND3
SH2B1
MNT
SMUG1
ZFHX3
PKNOX1
SVOPL
UBL4B
SPDL1
POLDIP3
MMP28
ABCC9
PPIC
SEC11C
TMEM14A
NAGLU
OBP2B
ADRB3
OR6V1
H2BC5
H1-4
FEM1B
COLQ
CCDC59
EVPL
KANK1
TMSB4Y
FZD8
ERCC1
ZSWIM6
POU2F1
CBFA2T2
TIGD4
ARFIP1
GOLGA8N
GOLGA8H
MYPN
CDH15
AQP1
ECHDC1
CAPN7
COPRS
CTNNB1
RAPGEF4
AKAP13
AGBL3
PDZRN3
FAM81B
TCF7L2
PSMB5
EYA1
TAF12
MROH7
CDC42EP3
SLC22A5
CPHXL
CDIN1
CACNG1
SNX16
GPR82
ZNF585B
ZNF383
GORAB
VANGL2
TNFAIP8
SIPA1L1
FGF8
NPM3
REC8
OPA3
SLCO2B1
DCAF4L2
AMACR
HERC6
TBX18
SVEP1
RIPOR2
HMCN2
GUCY1A1
IGF2BP3
C9orf153
GTF3C4
DDX31
CDC73
HUS1
PPP1R21
ASB15
COPZ1
EGFLAM
RNASEH2B
SRP9
CCN2
MPDZ
NELL2
BCL11B
ZNF397
RASSF4
SCHIP1
SORBS2
PPFIBP1
RAPGEFL1
GFRA3
SPRY1
NNMT
CHST9
C1orf105
FAM131B
PIGC
ZYX
SFXN3
PDZD7
PGF
RBMS3
MXD1
GLS2
SST
ACY3
BOD1L2
SPIRE1
MCF2L2
EPC1
TRPS1
DCAF4
CLCN5
DHRS3
HMX2
BUB3
RBM20
COMMD8
MXRA7
C12orf50
C12orf29
MAPRE3
GYPC
PFKFB3
RAPGEF2
OSBP2
CEMIP
NFIB
RCOR3
FSIP1
MRPL52
SLC7A7
ZNF341
NKX2-6
ARL6IP5
UBA3
FAT2
JCAD
TNFRSF19
HEY2
HMGCS2
NDRG4
MTUS2
CADM3
PDK1
PDGFRA
SMURF1
SMIM28
NRG2
ERCC4
XRCC5
LIG4
ABHD13
SIGLEC15
SCOC
ARHGAP42
NEBL
WDR82
GLYCTK
PGK1
ZNF77
CDK6
OLFML2B
ASXL3
CDK20
YWHAZ
RNF111
TMCC3
MYLK3
MAGEA11
R3HCC1L
ZNF430
ID3
ZP3
KCTD7
NT5C3A
GDPD5
LIPC
GNGT1
C6orf132
RBM18
MRRF
XPR1
PRICKLE1
TMEM185A
LARP7
USP17L21
USP17L20
USP17L12
USP17L22
KCNIP4
HAPLN1
SEMA3E
RAB17
KIF4B
ZNF746
NME4
PGAP6
RERG
HNRNPD
RPL22
RNF207
PBX2
GPSM3
OTUD4
AGER
INPP4B
PDE6A
TYRP1
SLC7A5
IER5
ANKRD33B
ZNF611
CCDC175
ALKBH5
SEBOX
IRS2
APP
VTN
SARM1
TULP4
SHB
RCOR1
SLC25A6
TEPSIN
NDUFAF8
VOPP1
LMOD1
SYNJ2BP-COX16
SYNJ2BP
ATP6V0D2
MAD2L2
DRAXIN
NR4A2
CACYBP
ARHGAP19
ANXA11
BTBD16
LRRC36
FHL2
BNIP3
SRSF11
LRRC40
GATA6
TCF4
THRA
MGST2
FBXL18
ACTB
SALL3
ABCA4
PLA2G2E
FGA
MUSK
CNMD
DUSP6
MGAT1
SSBP3
CEP70
CFAP69
TRIP12
FBXO36
CD248
AMOT
SLC9A3R1
RAB37
SLC19A1
ESRRG
CDK15
SERPINA7
PCNX4
ZNF853
PGLYRP1
IGFL4
TSSC4
NME1-NME2
NME1
CDH3
WDFY3
NDUFB3
FAM126B
ENTPD4
ABLIM3
SERTAD2
ZNF280D
ZC2HC1C
ACYP1
RALGPS1
MYOM2
MID1
RPS4Y1
PKP2
KRT18
NR2F2
PDE11A
ZNF367
DLG2
CRKL
ELAPOR2
ZSCAN30
RFPL1
CS
MEGF6
ITGBL1
OLFML1
KIF2C
SLITRK6
ALPK2
PCBD2
CPPED1
DNAH12
HSPB3
MPPED2
CNTNAP5
ASB6
WWP2
TNNT2
STOM
SRI
SPRED2
BNIP2
IL1RAPL1
MIER1
DNAI4
NR2F6
KCNMA1
HNRNPA2B1
CBX3
EAPP
NCAM2
PDHB
CLASP2
ATXN2L
CEP41
MMD
SNX8
USP2
CHODL
MLIP
PLAAT2
MEIS3
PDCL3
CSRP1
F3
C9orf92
FNDC5
SUPT7L
SLC4A1AP
KAT6B
UBE2H
QPRT
CELF2
SLC28A3
TTC13
CTF1
BCL7C
KCNJ14
GRWD1
TGM2
ARHGAP28
DIP2C
CLIP3
ELK4
RANBP17
GFRA1
RGS5
BARD1
PAQR8
PMFBP1
TSHZ3
MLLT10
DGKZ
SEC24A
DNAJB4
ALX1
ART1
ART5
NEUROG2
NEUROG3
WNT1
DUSP29
ICMT
HES3
MBTPS1
CDX2
VEZT
FGD6
G6PC2
PMAIP1
ZP4
SERINC5
ATOH1
NEUROG1
PALM2AKAP2
GLRA1
RAB11FIP1
LBX1
IGFBP2
NEUROD1
INSM1
LEFTY2
ETS1
NHS
ADNP2
RHBDD3
EWSR1
UNKL
URM1
CALCOCO1
SOAT2
IGFBP6
DAPL1
MUC20
CDCA7L
PDHX
APIP
C16orf91
ITGB6
DLL4
PHOX2B
UNCX
ST18
DLX4
SYBU
PRRX1
MSX1
FABP7
ECEL1
SP5
TPRA1
MCM2
CERCAM
MYLK4
ARID3B
ANK2
FGF19
NOTCH2
NFE2
LRATD2
NAV3
ME3
FAM222A
ID1
RGS12
GPR108
TMEM70
ELOC
MALRD1
MYRIP
PAH
ASCL1
MTRNR2L2
MSH3
DHFR
TRIM65
MRPL38
ERRFI1
RBBP7
TRIP10
SMPDL3A
GADD45G
MRPL3
GRSF1
HOXB4
DMBX1
RIMKLB
IL17RD
KAZALD1
ARSG
KDM8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CR1L
SPATC1L
SNAPC1
NCOA7
LAMA4
PAX6
MSX2
DMRT3
MTRNR2L1
PRDM12
TRABD2B
KMT2A
MRPL34
DDA1
ABHD8
OTX1
FRMD7
ZNF652
SH3BP2
BFSP1
RASSF2
IER3
FLOT1
LPIN1
PARP11
EVA1A
INAFM2
NEK3
RFX2
SPCS1
GLT8D1
FGR
SH3BP1
ALDH1A2
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
FKBP1A
ARHGAP24
DBX1
CACNA1D
AXDND1
RNF149
PDP2
UPF3A
SCGB1A1
SULF1
ERLIN2
METTL11B