ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584310 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◣ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PSMD1
ZNF335
RABL2A
NME6
DUX4
RABL2B
NUP85
CACTIN
MAPKAPK5
IPO13
VDAC2
VTI1B
POLR3F
DZANK1
NVL
HSPA9
PSMG2
CEP76
TAOK3
SUDS3
DYNC1LI2
FAM187A
EFTUD2
CCDC103
GOSR2
RWDD1
NUP205
LYRM4
FARS2
TBCK
AIMP1
SRD5A1
RPL21
NNAT
BLCAP
REXO1
HADHB
HADHA
EXOSC5
BCKDHA
POLR2E
GPX4
MRPS7
MIF4GD
GGA3
STAM
C19orf48
PES1
WNT1
STAM2
S1PR4
NCLN
ARF1
FRG2C
UPF2
ATP5MG
LOC102724770
DGCR6
DCTN1
SKP1
ANAPC7
FARSB
TSNAX
ZNF576
IRGQ
TSN
SART3
ISCU
PNO1
TTC8
ZRANB2
SEC61B
ALG2
COX7A2L
RABGGTB
PDAP1
BUD31
XPNPEP3
ST13
DNAJB7
ZNF503
CAPRIN1
SMC2
PCBP1
SF3B3
COG4
G6PC2
TMED1
VARS1
HOXA3
HOXA4
PI4KB
RBBP5
FABP7
SMPDL3A
ACTR10
NDUFA4
RPL35A
IQCG
LMLN
PROSER1
NHLRC3
RPS27A
CLHC1
RPS23
ATP6AP1L
SELENOF
HS2ST1
GOLGA5
FZD8
SFI1
EIF4ENIF1
SLC35B1
DPH6
LBX1
PSMD12
UFM1
PIP4P1
OSGEP
APEX1
ZFHX4
PLAGL1
SERINC5
PAK1IP1
C6orf52
ADK
AP3M1
HSPA1B
MRPS5
FGF19
ZNF608
RPS12
ANK2
NFKBIL1
DDX39B
ATP6V1G2
RBKS
BABAM2
SUPV3L1
RHBDD3
EWSR1
C6orf47
BAG6
APOM
ARHGAP24
USP1
PARP11
DMRT3
PPP1R1B
NEUROG2
FAM104A
C17orf80
ICMT
HES3
ABCG2
RAB11FIP1
ICE1
ETS1
ARHGAP11A-SCG5
ARHGAP11A
TLE1
TM9SF1
IPO4
TSSK4
ITGB6
FOXP2
RPS29
LRR1
TMEM120B
MYLK4
DBX1
CALCOCO1
PTGES2
SOGA3
ADNP2
SUCLG1
TLE4
EVA1A
LAMA4
LRATD2
NCOR2
MUC20
PALM2AKAP2
NFIA
MRPL3
PCDH11Y
FOXB2
COMMD1
CCT4
C5orf63
CBFA2T2
NOTCH2
PDE1B
LHFPL2
TMEM14A
IRF2BP2
UNKL
C16orf91
PIN4
ARID3C
DCTN3
KBTBD8
OR6B2
NDUFA10
FRG2
GRIK2
PAF1
SYNPO
SEC22B
RPL7
RDH10
TRIM71
ATOH1
PDZRN3
PDHB
PRUNE2
BNIP3
BRINP1
KITLG
MSX1
METTL11B
PRDM13
MYH2
TPM1
SCGB1A1
WT1
DIO2
HES1
CABP7
PIM1
RGS12
VEZT
FGD6
NEK7
FOXD3
MBTPS1
PIPOX
RND3
TRABD2B
DDAH1
CCN1
PRDM12
LRIG3
TMEM107
KCNK16
TMEM275
ASXL3
VIP
PDHX
APIP
LRAT
CITED2
ARHGAP22
MRTO4
EMC1
NR2F1
RPL34
FRMD7
MEIS2
SPTBN1
GLRA1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
USP17L21
USP17L20
USP17L12
USP17L22
CD69
TPO
PGLYRP1
IGFL4
SH3BP5
NEUROD1
DAPL1
SNAPC1
DTX4
VGLL4
TAF9
RAD17
AK6
SMURF1
STK36
RNF25
IGFBP2
AGPAT3
ID2
CLDN11
RIMKLB
CLEC19A
HOXD3
OAZ3
MRPL9
CEP41
CDX2
SYNGR4
ERRFI1
CERCAM
ZCCHC13
HSPA6
EIF2S3
GALNT14
ACSS3
HOXB3
HOXB4
SOX21
ME3
AGMO
COL17A1
MOB3B
C10orf90
FHL1
RBP3
PDE6B
PDE4DIP
SPACA1
SEMA4D
ALDH1A2
NRARP
GORAB
OTUD6A
AWAT2
PMAIP1
CTXN3
ID1
B3GALT2
NEBL
GPR176
GMPR
TRMT9B
RARB
LARP7
GNAS
MAP1B
RAI14
NEUROG3
UNCX
PIGX
CEP19
KLHDC8A
ATOH8
BECN2
SEC11C
DHRS3
NMNAT2
CACNA1D
SMARCA2
CCDC88C
EVX2
LIMK2
KIF21B
MAD2L1BP
RSPH9
VAV3
CETN1
FAM222A
MXI1
LZTS1
TEX2
KCNK10
PRRX1
GAS7
RIC8B
HOXD4
FMNL2
HPS1
IL17B
TPRA1
MCM2
GUCY2C
PDE12
NECTIN1
HOXA1
HOXA2
BAIAP2
RPS13
NTM
URM1
CCDC200
SLC7A5
JAKMIP1
TLE3
PPP1R12B
CCDC198
PKHD1
ZGPAT
ARFRP1
CEBPA
SKIL
CNPY2
RARA
POP5
HMX2
BUB3
SPIRE1
C1orf105
ACVR1
NXPH4
KLB
LRGUK
MTMR7
PPFIBP2
ELAPOR2
UBE2I
TLE2
PGPEP1L
NEUROG1
BFSP1
CEBPD
TMEM72
SLA
OSER1
RTL8B
CDC73
ABCB5
LMO1
GTF3A
NUTM2D
CTNNA3
DDX3X
LRRC1
PAM
NPAS1
GSX2
TSPAN13
REV3L
BICRA
HOXC6
HOXC5
SNRPN
KCNN4
MED4
FLVCR2
ALKAL2
OR5A2
MXRA7
OR5A1
CHD7
LRIG1
TMEM9
FGD3
GADD45GIP1
HOXB1
CAMK2N1
GPR61
STXBP5L
FAM118A
PPP1R1A
POU2F2
RFX3
ERCC1
OSBPL11
PHC2
DLG2
ZNF746
NEO1
ALPL
PRRC2C
TPST2
RABGAP1L
CLEC18C
NINL
TNNI3K
CDH16
LECT2
CRABP2
FGFR2
PAH
ASCL1
DMBX1
RASL12
KBTBD13
SCARF1
RILP
PCBD2
NCOA7
MNX1
FOXP1
PPP1R16B
LOC102724265
PADI2
MUSTN1
ITIH4
SSBP2
TMEM237
SHF
TRPM3
ST18
RUNX1T1
DMD
TTR
BTBD1
GJA8
EBF3
CCDC33
ZFX
CPA1
SYCP2
PPP1R3D
FAM217B
PLCH1
C1orf226
TRIM65
MRPL38
CRYAA
CRYAA2
HDAC9
ST8SIA3
FOXN4
TBX3
RGL1
CYP26A1
USP17L11
USP17L19
PRR16
HOXC4
FBXL18
ACTB
AMBN
PDX1
FXYD2
ZNF585B
ZNF383
ID3
DSCAML1
USP17L18
USP17L17
CDPF1
PHOX2B
GNG12
METTL24
ZNF367
PREX2
NPY2R
TNFRSF19
ELMOD2
TANC1
RPN1
STARD13
USP17L13
USP17L15
IKBKB
FMN2
GTF3C4
DDX31
CLDN2
SYBU
MEF2C
RAN
LEKR1
FSTL1
NANOG
ALKBH5
SLC2A9
DONSON
MEIS3
LHX2
CNN3
SPCS1
GLT8D1
SLC39A14
POTEJ
NPAS3
TMPPE
GLB1
SMUG1
USP17L10
GUCY1A1
RCOR3
HNF1A
MAB21L2
CS
CAMTA1
HPD
CHD8
LMO2
EFNB2
FAM181A
KLHDC7A
ADO
PBX2
GPSM3
GPR84
AGER
HNRNPA2B1
CBX3
BNC2
ZFAND1
LCA5
CHMP4C
CLRN1
TNFSF18
IPO11
DIMT1
FOXL3
NXT1
NAF1
ARHGAP10
LDLRAP1
B3GALT5
RCOR1
MSI1
ZNF853
AMD1
ELMO1
QPRT
DLL4
CHODL
PDPN
HK3
EPB41L2
APOLD1
NAV3
LIX1
MS4A4A
AQP6
CASC3
KCNIP4
FIGNL2
DPYD
PLEKHG4B
GGCT
PCDH18
LIN28A
REC8
VANGL2
TFAP2B
LGALS12
VSTM2L
RORB
NEK3
LRRC10B
RXRG
KRTAP12-1
SPTSSB
KMT2A
TCF12
SYNPR
IGFN1
PRTG
LDHB
NRCAM
FNIP2
CLEC18B
CATSPERG
SOCS3
FAM162A
CCDC58
CPLX1
TSPAN11
AXDND1
VOPP1
EVX1
CDRT15L2
KIF26A
CNTN1
NEUROD4
MMRN1
DIPK1B
ABAT
CFAP221
SH2B1
HRG
MBNL3
ARHGEF28
OAZ2
PTCHD4
PSMB5
ADD3
PHTF1
DDO
SPARCL1
LMO3
FILIP1L
GALNTL6
SRSF11
LRRC40
KLHL7
FGF10
HOXA5
PPP2R5A
DACT2
TRDMT1
GSTP1
TSPYL1
DSE
FGFR4
CDH4
CD79A
CREB5
ARHGEF1
RIPOR2
MAFA
MYLK3
RASSF10
PRSS47
KAT6B
PAX8
DUSP2
ASTL
GALR1
GCSAM
EMCN
MAD2L2
DRAXIN
DCDC2
SPOCK2
CDH18
LOC102723360
MECOM
WBP1L
GAS2L3
OMD
DZIP3
CIP2A
BAHCC1
IFFO2
SOX6
EAPP
ADM
SOAT2
IGFBP6
SH3BP4
DUSP4
PEX2
ANKRD6
ID4
RBP1
HNRNPD
SIRT4
FAM107A
FRS2
FABP9
JUN
SMIM28
CACNA1H
TP53INP1
DUSP29
ZP4
DUSP6
INSM1
BBS9
LEFTY2
NHS
S100A10
CDCA7L
SP2
ANKLE2
DLX4
ECEL1
SP5
RBPJ
ARID3B
NFE2
KDM2B
CLGN
GATA4
GPR108
TMEM70
ELOC
MALRD1
MYRIP
MTRNR2L2
MSH3
DHFR
RBBP7
TRIP10
GADD45G
CCNDBP1
GRSF1
IL23R
IL17RD
KAZALD1
ARSG
KDM8
EXOC2
CR1L
SPATC1L
PAX6
MSX2
MTRNR2L1
MRPL34
DDA1
ABHD8
OTX1
ZNF652
SH3BP2
RASSF2
IFI16
IER3
FLOT1
LPIN1
NDUFS7
INAFM2
TCF7L2
RFX2
FGR
PYDC5
PKDCC
METTL3
SH3BP1
PLEKHO2
MBD2
CBX4
FKBP1A
RNF149
PDP2
UPF3A
SULF1
ERLIN2
ABLIM3
TAF12
OR10AC1
LYL1
HIP1
PRDM6
MVB12A
RPS10-NUDT3
RPS10
KDM6B
SPG7
HUS1
MTRNR2L8
CMTM7
HEXIM2
PANK4
HES5
ETFBKMT
ARID5A
TESC
RPS24
POLR3A
NELFA
TMEM212
SEC14L1
STK38
ZFHX3
KCNAB2
JAK3
HSPA1L
HSPA1A
TBC1D10C
PPP1CA
CADM3
PARK7
MYBPC3
CCPG1
C15orf65
TDG
C12orf73
TIGD1
EIF4E2
FRAT2
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
MRS2
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
SNCG
MMRN2
KMT2E
KDM3A
GRHL3
PRDM10
UBXN10
PLA2G2C
TBC1D8
RASA4
CCDC88A
SPECC1
LYPD1
BRWD1
ARHGEF10L
NADK
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
DGKZ
PAX3
ENO1
WDR6
KLF17
HAND1
FOXB1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
MEOX1
OTUD7B
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
MAGEA11
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
CCDC114
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
NRXN2
HOXC8
VAV1
SH2D3A
KHDRBS1
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
DIAPH3
CNOT2
IMPG1
POLD2
IRX5
LIG3
CBFA2T3
GATA6
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
ASB6
MNT
NFKBIA
IQCH
AAGAB
TYRO3
TTC13
RXRA
ZNF414
ZFYVE28
CFAP99
ZDHHC1
CD38
INAVA
BCL3
CPVL
CHN2
SKI
HEBP2
TRERF1
CMTR1