ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
SRSF7
HEXIM1
JPT1
SRSF2
MFSD11
TRIM28
JUN
ZBTB4
POLR2A
RPL5
PPM1D
CDC25C
FAM53C
H3C15
H3C14
RPL3
C15orf39
H4C14
RHOB
NGRN
C12orf65
ID4
TUBA1B
ILF2
HNRNPAB
FUS
HSPA1B
CIRBP
THADA
BCAR3
EIF4G2
SFPQ
POLG
PIK3R3
CALR
EIF4A2
KLF6
RPL41
PPP4C
H3-3B
RSPH3
RCC1
TAF4
H1-10
PRDX1
RPLP1
EEF1A1
ATF4
SND1
COQ8A
TRA2B
DUSP1
JUND
SRSF6
HNRNPH1
DDX5
CEP95
SLC38A2
H4C15
TPI1
GTF2H5
SETD5
INTS6
TRAF7
RPS14
KCTD13
SRCAP
LOC730183
YWHAE
ZBTB37
SOD1
GNAI3
RPL13A
SESN2
TMEM242
FAM219B
ECI1
GTF3C6
PABPC4
SIRT4
INTS2
WDR1
CBX3
HNRNPA2B1
COQ2
NCOA7
GBA
PPEF1
KNTC1
UBB
H2BU1
H2AW
EIF5
NUP133
FBXL3
SLC9A1
BTG3
UBE2S
ACTB
EIF4A1
CITED2
PIP5K1A
SEPHS2
NASP
RBM39
RPS8
NKIRAS1
RPL15
RPS2
CZIB
SMC1A
RIBC1
E2F3
SNRNP48
RPS4X
ZNF143
SRSF5
ZBED8
NOL11
RPL11
PRRC2B
EEF2
MYLIP
STMN1
SLFN11
TFRC
DNTTIP2
OAZ1
FSCN1
EIF1AX
NDUFV3
BAMBI
IDH2
SMOC1
NOTCH2NLC
NOTCH2
CBX5
HNRNPA1
SPECC1L
NSF
NOP14
GRK4
DPP9
HSP90AA1
EFCAB2
LTA4H
RBM26
TP53BP2
RRP1B
HSF2BP
PPIA
NFYC
SRSF1
POLE4
SCAMP2
HMGN2
MAT2A
RPL6
CALM2
S100A13
CHTOP
C19orf48
HSDL2
DDX17
SLC1A5
PPP1R10
MRPS18B
SF3B4
TOB1
RBMX
LUC7L2
FMC1-LUC7L2
FMC1
EIF1
YIPF6
PSRC1
RBM12
CPNE1
NUP214
TUBB4B
TSPAN3
LUC7L
POLR2J3
TBCE
MTRNR2L2
NABP1
MAPT
SOD2
WTAP
LIN9
FAM200B
PSMC6
RPL31
ALDH3A2
MTHFD2
BTBD10
ABCA5
ARIH1
KIF5B
DEGS1
TIA1
RNF220
MTHFS
XBP1
B4GALT3
MKNK2
GADD45A
TUBD1
RPS6KB1
DCPS
MCMBP
C16orf72
LAP3
MESD
ATP5PO
AFF1
RAB11A
RPL19
CHRNA5
WRAP53
TP53
DCAF8
MORC3
NCL
ZDHHC4
SIPA1L1
UBC
TAF1D
C11orf54
TM2D3
PKM
DGCR8
RPP25L
ALOXE3
TAF15
EIF4A3
HINT3
TAOK1
SNX3
SRRM2
HSPA5
NOTCH2NLB
NOTCH2NLA
YBX1
FZD8
HEXIM2
KLHL11
ARPC1A
TGOLN2
H3C1
ZNFX1
CHEK1
CDK1
UGCG
BORCS5
MCL1
DYNLL2
BLOC1S5
SRSF3
MSH6
SDHAF4
RNPS1
UGP2
ID2
THOC3
SACM1L
H2AX
TRAF4
DLX1
CALM1
ZNF771
ULBP1
CENPH
ESR2
VAMP1
ALDH7A1
YWHAG
RBM25
RNF122
MTF2
FAM71E1
EMC10
IER5
H2AZ1
DDX3X
GGPS1
ARID4B
LSM14A
ALDOA
IMPDH2
HERPUD1
GGA2
ADPGK
ZNF280C
PARP16
AGL
PHF10
USP10
OAZ3
RPL24
KLC1
RCBTB2
C1QTNF6
EXOSC9
HDAC1
SLC20A1
DHRS12
RPS15
ACAD9
RPL37A
WBP11
C12orf60
RBBP6
SMYD4
RPA1
MTRNR2L8
DHX9
ASCC1
ANAPC16
MAPK3
CEBPA
POLR3E
ACTG1
ATF3
MAP3K21
MESP1
IL4I1
NUP62
ATF5
GANAB
DDX39B
MICU2
HMGB2
NUDT1
MRM2
CFAP20DC
GDI2
LRCH3
UCHL1
TSC22D2
USP1
RNF146
MSX1
ZBED4
UFL1
ATP1A1
RGPD2
RGPD1
RPSA
RPL10A
AMZ2
NXF1
GORASP2
SP1
CDK12
RPL13
TXNDC15
CLSPN
HNRNPDL
GLUL
ENOPH1
SOAT1
HSPA1L
HSPA1A
RPL29
LENG8
DYNLL1
SRSF9
SLC22A4
HDHD3
PCIF1
TTLL12
PMPCA
ENTR1
DMWD
EZR
SLIT2
H2AZ2
NCOA5
ZWILCH
RPL4
PCBP1
BUB3
C12orf57
NEK4
TARS3
WDR35
HACD3
ADAM17
BRD2
ZMYM1
VPS72
HNRNPR
MTF1
MTMR2
YWHAQ
EPC2
BPHL
PRADC1
CCT7
FTL
FDXR
ZSWIM7
TTC19
TMEM63A
RPS19
UMPS
SEC31A
THAP9
CSNK1E
PHGDH
RPL12
LRSAM1
COMMD4
EXOC7
TRA2A
FTH1
DNAJC25-GNG10
DNAJC25
PUM1
UBA2
KANSL2
DDIT4
SLC5A3
MRPS6
HINFP
ZBTB25
CASP3
PRIMPOL
ZBTB1
TSNAX
ZNF830
CCT6B
RPL22L1
BCLAF1
PRMT2
TEX30
DNAH14
MAN2C1
ERMARD
MRPL17
DPY30
ACTN4
FAM89A
RBBP7
TUBGCP3
DDX19B
AARS1
KHDC4
PMF1-BGLAP
PMF1
ZCCHC17
SNRNP40
LRIF1
MFSD14A
TMED4
SAT1
GNA13
RAP1GDS1
ATP2A2
SLC7A5
ISL2
RTL10
GNB1L
CHIC2
GLS
FASN
SLC25A19
SLC35E2A
ATXN2L
PAN2
ARF6
DNMT1
RPAP2
GLMN
MSRB2
ING3
BOD1L1
COMMD6
TTC32
PUM2
BTG1
PIGF
CRIPT
GCN1
PPP6R2
SOX4
CKB
MAEA
COX20
PELP1
INTS7
DTL
ANKRD13C
SPTAN1
MYL6
MAGI3
HIRIP3
HSP90B1
CANT1
SLC26A2
C22orf39
ZNF627
SLC16A1
NDEL1
AKAP7
TUSC1
CSRNP2
LRRC37A3
CDC20
PRKACB
REEP5
THUMPD2
ADM
MCM7
AP4M1
MANF
MRPS21
NOP56
SZT2
MED8
SREBF1
YEATS4
RBMXL1
KYAT3
ZYG11B
SLC33A1
H2AC19
H2AC18
GPATCH3
TBC1D22A
RBM34
SIL1
ZBTB2
PHF14
PTMS
NEFL
HOXD13
CANX
TOMM20
CLN5
MATR3
HES1
SETD9
CD164
ARL6IP1
ILKAP
CPT2
STT3B
YWHAH
HFM1
MOB4
RPS15A
AKR1A1
PIP4K2B
MIF
PI4K2B
NAV2
NCKIPSD
RPS7
RPS3
HSPA8
CSE1L
TEX14
RAD51C
IFNAR1
ADAMTS1
DHX15
TRIM13
MBOAT2
PRPSAP2
RPL7A
MED22
DNAJC27
SMURF2
EPM2A
PABPC1
CSDE1
OXLD1
CCDC137
RPL9
LIAS
SLC25A3
C21orf91
SCAF4
C15orf61
SUMF2
FAM117B
PSMB3
RBM8A
SRP68
HACL1
BTD
DNAJB1
CKS2
PRDX3
P2RX4
HSPA6
TM9SF4
SLC3A2
XPO1
ARL1
IP6K1
NUP188
DOLK
TAOK2
GUSB
PPP1R8
LUC7L3
COPS6
ZNF131
GAPDH
BMP2K
SLC25A4
SLC39A10
POLE3
C9orf43
ANKRD54
EIF3L
RNF149
SQSTM1
NSRP1
THOP1
CYCS
POLR3B
PDSS2
NTMT1
RASSF1
MOSPD2
FANCB
TRIM41
MRPS14
SEC14L1
NSUN4
TSGA10
SNRNP70
MCM5
OSTM1
TMEM116
ERP29
MPI
MACROH2A1
KMT5B
EIF3A
H4-16
TRIM65
ZC3H4
USP25
FOXO3
TMSB10
ING5
RPP38
TOE1
MUTYH
LZTR1
H4C3
HEATR1
TOB2
MAP3K3
OLA1
NT5DC1
DCAKD
RPLP0
FAM133B
SRSF4
UCHL3
DIP2A
ENO1
PCGF6
PRPF38B
ARL15
EXOSC10
ANXA11
CDKN2AIPNL
UBAP2L
C1orf43
RANBP2
PMPCB
ZKSCAN2
TMEM39B
UHRF1BP1L
VPS37B
MED11
PRPF4
CDC26
ZNF589
CNOT11
EZH2
MDM2
MVK
SELENOW
ACACA
TADA2A
SYP
SLC16A10
RPL23
ADIPOR2
BCL2L13
HYLS1
BTBD1
THNSL1
TBC1D4
MRGBP
ATXN7L2
NBPF1
PRRC2C
USP39
HNRNPU
C2orf68
SLC25A11
RNF167
ERO1B
URB2
TAF5L
H4C8
PPP6R1
IREB2
CD320
USP24
TMX1
UNK
RBSN
SPRYD3
RPS24
SMARCC1
ZNF839
CCDC200
H2BC21
H2AC20
MSTO1
USP38
NAXE
TNFRSF10B
PTBP1
C7orf25
CLNS1A
SLBP
SRRM1
ADI1
MRPL40
HIRA
PSMG3
RPF2
TMEM128
PYCR2
TPRA1
TCAIM
UBTD1
MMS19
BLOC1S4
SMIM13
ZDHHC14
BFAR
HASPIN
SERTAD2
CCNL1
ZNF565
ZNF146
POLR2J2
UBE2Z
TBC1D2B
COIL
IMMT
SF3B1
PSTK
GEMIN8
STIL
POLD2
BSG
STRAP
DDX6
PUS7
VIM
IPO7
MRPS15
C10orf143
TNRC6B
NPM1
ZNF326
LYPLAL1
MCRIP1
ANKRD31
GEMIN4
PITRM1
FARP2
RBFOX2
PARK7
FBXW2
EIF3K
HACD2
MAP4K1
DNAJC9
SCN11A
NARF
WDR48
MEF2A
ZFAND5
PSMA4
UBQLN2
ENAH
SLTM
STARD7
B2M
PFKL
POU4F1
CCZ1B
HNRNPD
LATS1
ANGEL1
ZNF574
OSCP1
UPF1
ALG6
PPP1R12C
GABPB2
MRPL39
MAP2K2
MYDGF
SDHC
SELENOT
RERE
DARS1
GPX4
RPS13
RPL17-C18orf32
RPL17
HLCS
LDHA
CARS2
SLC25A36
CSK
PCMT1
CKAP2
TXNRD3
WNK1
USP48
MGAT1
TMED7-TICAM2
TMED7
KEAP1
TRAP1
RPAP3
SNRNP25
POLR3K
SDF2L1
GALNT2
TXN
CDC6
METTL23
JMJD6
MEPCE
ZCWPW1
ELAC2
RPS9
H4C5
PSMB2
ZNHIT6
ATPAF1
PIM3
BTF3
NUCB2
TIPIN
IGF2R
RASA2
TARBP1
C16orf95
CNTLN
MRPL53
NRDC
FAM162A
CCDC58
C5orf34
ZNF282
COA7
TYK2
FER
PCDH9
TNKS2
RNF19B
OAT
TIMP2
PLA2G4C
SP2
ASNS
RBM15
NPRL3
RNF10
ZFP36L2
AUH
LRP11
UBA52
ADSS2
KDM5C
RPL27A
TNPO1
HMGN1
TMEM50B
PCBD2
EDRF1
MAFB
NELFCD
TBX2
NUCKS1
MPV17
CNBP
CCDC66
ZDHHC7
TIMELESS
WDR33
STXBP4
COX11
STX17
CNKSR3
RAD52
H2AC21
SNX5
MGME1
TCP1
MRPL18
MAP2K7
KNL1
TRIM26
DYNLT1
WBP2
NDUFS7
FDPS
ZSCAN12
KIF1B
ATG14
HNRNPA3
DYRK3
COPZ1
VARS2
RNF135
CCSER1
RCHY1
DR1
KAT2A
LNPEP
RPL36AL
MGAT2
UBE3C
IPP
RFWD3
FKBP4
CMC1
AUNIP
SMURF1
PDCD4
D2HGDH
CGN
CWC25
METAP2
GNPAT
C1orf131
TIMM44
CYP51A1
PHIP
CTH
GTF3A
LTN1
CLTC
UQCRQ
GDF9
N6AMT1
CCDC88A
ADSL
TRIM25
PBLD
HNRNPH3
CSNK1D
TECR
SYAP1
SYNCRIP
KIF23
DIS3L
ATP6V1G1
SGK1
SPATA20
SIN3B
IVNS1ABP
H2BC12
H2AC12
RMND5A
PRRC2A
PDHB
ERN1
TSPAN17
KHDC1
ZNF592
CPD
MRPL3
SSU72
C2orf42
RACK1
TNIP2
POLR2D
NISCH
MSI2