ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NLRP12
WDFY3
GATA4
SPATC1
LAMP1
CDCA3
NFKB2
MEF2C
WDR74
PLSCR1
XRCC5
ABT1
GNG2
GSTA4
CMPK2
FEM1A
TLR4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CALR3
C19orf44
PGK1
ADAM28
SMPD3
RPS19
STEAP4
UBXN8
PDLIM2
PTK2
NUDCD1
BOD1
NUTM1
NOP10
APOL6
NIBAN3
RNF149
H4C11
IFRD2
ZNF221
H4C12
NEDD9
CD1A
DOCK8
PEX12
DCAF12
GBA
NR3C1
H4C3
TMEM91
B9D2
DDX58
TMTC3
CEP290
NBN
KBTBD6
ASGR2
SCNM1
LYSMD1
PPP1R12C
GHRL
CTU1
MTMR9
NUDT4B
NUDT4
RPS20
H2BU1
H2AW
INTS9
HMBOX1
MS4A3
CLPB
ZNF780A
ZFYVE1
ZNF444
SH3BP2
TMEM115
FBXW4
VCPIP1
C8orf44-SGK3
MINDY3
ZSCAN30
DYNC2H1
TASL
SIGLEC6
MRPL24
TRIM41
EXD1
CHP1
NDUFS7
EXOSC4
TSNAXIP1
RANBP10
MICOS13
HSD11B1L
CD33
NUF2
SPRED2
PANK4
PEX3
ADAT2
LTB4R
RUBCNL
H4C14
H4C15
ST3GAL2
NBEAL2
RAB4B
SLC1A5
H4C9
IPCEF1
KBTBD7
MRPL30
MITD1
MMACHC
MEFV
PAFAH2
BTRC
TPRKB
PROS1
ZNF225
RFX1
CHMP4B
PNKD
AAMP
BRF2
MTF2
PPRC1
MRPS18C
HELQ
PLEKHM3
DDX18
DENND3
CCDC152
TYROBP
TMEM243
GSPT1
TRIP4
BAZ1A
RMND1
ARMT1
CCDC200
RAB39A
TOR1AIP1
H2BC18
H3C13
ZNF226
FIGNL2
FOLR2
P2RY14
TM6SF1
AP2S1
ALOX5AP
KRR1
INVS
ERP44
CCAR2
CARD8
RMDN2
ARHGAP25
PHB
EHD1
RAC2
NDFIP2
MED23
KANSL3
COPS7A
BANK1
IL1RN
NCF2
DISC1
YES1
PEMT
FRG1
CTTN
ENOSF1
TAF1B
ARID5A
CCER2
STAP1
ICAM1
POMP
GRPEL2
CCDC146
CLEC10A
NME7
BLZF1
TAL1
INSC
JOSD2
INPP5D
SIGLEC1
PRCC
ZSCAN22
DCP1A
ZCCHC4
ANKRD18B
UTP3
FAM227B
DTWD1
ITGA4
PGBD4
EMC7
FLOT1
RIPK1
INTS12
GSTCD
PRRG2
NOSIP
LRRC37A3
AURKAIP1
NOTCH1
AHCYL2
WASHC4
TBC1D19
RPS7
FBXO46
PRKCE
VPS26A
LILRA2
ASPHD2
VAV1
SMC6
GEN1
PARP10
FRA10AC1
GATB
TEFM
MTIF2
SHISA5
TTC33
GALK2
COPS2
ARPC3
IPPK
GABPB2
ERLIN2
OBI1
CTSG
RFFL
RAB27B
CA13
PPP6R1
USP3
TMEM154
RPL6
UBR1
SSBP1
DPY19L4
SYMPK
FOXA3
PEAK3
SF3A3
CCDC149
SSBP2
DR1
PPP1R12B
TBPL1
BORCS7
RPL5
FASTKD1
LCE3A
TMEM68
TGS1
TNNI2
TSSC4
VPS13B
LMO2
PHF12
DDX1
H3C3
RPS6KA1
CRTC2
DHX8
PIK3CG
ZAR1L
BRCA2
RBBP5
ZC3HAV1
GTF2H2C_2
GTF2H2C
MRPL42
RNPEP
H1-3
SCRIB
RPGRIP1L
FTO
PPP1R11
NDUFB7
CEACAM21
SPATA24
BNC2
SLC35B4
ZNF268
CSF2RB
NSMAF
ANXA2R
RPIA
IRF9
CARD19
ARHGEF18
FAM133B
BCL2L13
FAM228B
SF3B6
TRIM35
PTK2B
TACC1
GTF2H3
EIF2B1
FAM167A
TMEM11
MRPL48
PCBP2
ZNF224
LSG1
DPY19L3
LCMT2
ADAL
PPIP5K2
ZNF554
SECISBP2L
TCTEX1D1
ZBTB45
CCR1
SEC14L1
PLCXD2
INO80D
ALG10
MRPL1
TTC14
CCDC88A
NINJ2
DSTYK
ZNF350
CDK5RAP2
SLC24A1
RALB
NUCB1
CAVIN2
CHCHD5
ZNF56
CCDC90B
SLC1A4
ZNF175
APPL2
FUT10
SDSL
HCK
PPM1M
TMEM242
POLR2J3
ZC3HC1
USF1
TMEM229B
PARP2
PLEKHA4
GFUS
JRK
SLC39A13
IDH3B
ADAR
SIRT2
NFKBIB
PSMF1
H4C4
PEX2
STING1
SNX17
EIF2B4
SLC9A1
TACO1
TFPT
PRPF31
MRPS23
MARCHF5
CPEB3
STX7
CCDC9
SMG6
CD93
ZNF235
PSMA8
PCM1
TTI2
COMMD2
CHMP7
GNB4
TMEM222
HUS1
KDM1A
H1-4
H2BC5
TSC1
GFI1B
AQR
LARS1
UBR2
BRWD1
PIGV
ZNF518A
SLC37A2
NME1
RPL37
UBE4A
ANKRD40
INKA2
DDX20
ZNF286A
RIC8B
EIF2D
SUPT7L
SLC4A1AP
SIRT4
PPP5D1
CALM3
PSMD9
HPD
BCL2A1
GTF2H2
NFX1
ACTR3
MCUB
CCNL1
HMGB1
USPL1
RBCK1
ZNF846
TCEA2
KLHL20
ARHGDIB
ZBED4
FOXP1
MPG
ORC2
GAS6
SCAF1
SCAMP4
ADAT3
INO80C
MORF4L2
H1-2
TATDN1
NDUFB9
POLE4
HERC6
ZC3H6
RRS1
CTNNB1
TRDMT1
H4C8
HIBCH
SLC22A18
SAR1B
SPOP
SIRT6
ANKRD24
KDM3A
TRIP12
FBXO36
N4BP2L2
MED4
INTS10
TNFAIP1
IFT20
USP15
SLC44A1
POLDIP3
GOSR1
PRIM2
PPP3CC
ALG10B
MALT1
C1orf159
MKRN3
BOLA1
ZNF148
ING4
MRPS31
GFOD2
TRIM69
TMEM41A
SLC45A4
MOB4
EMC4
RXFP1
CWC25
NUFIP2
SETDB1
DCAF10
H2BC9
H3C7
SLC35E2A
PSMC1
MARCHF6
DDX23
FBXW11
ESCO2
FBXO28
BNIP1
PLEK
ANKRD22
VPS50
HEPACAM2
PPIL2
TVP23B
PSMA1
DRAP1
C11orf68
TMBIM4
SLC22A16
TIGD6
HMGXB3
MYL12B
CCNC
MBNL1
DSCC1
ASH2L
RPL27
MRPL27
EME1
MYBPH
TPR
ODR4
AOAH
CAMP
GTF2H4
THAP1
ARMH3
H4C5
DENND4B
CNPY3
COX7C
ZMPSTE24
TATDN3
NSL1
TXNDC15
ALDOA
ZNF420
NUDT13
ZNF212
UBLCP1
RNASE10
CCDC124
COPS4
ZNF331
C12orf57
ZNF180
COX7A2
POLR2M
METTL3
FNTA
ZNF76
CYP4V2
MRPL34
ZNF574
SPIDR
TFEC
CDK5RAP1
TSSK6
NDUFA13
ARL8B
CCDC114
TSG101
ORMDL3
DRG2
CBLL1
PTGS2
USE1
RPS15
LSM8
H3C1
H4C1
BAZ2B
BMS1
PRPF18
MICU2
BANP
ARHGEF1
UTP23
H3C2
HDDC2
MCTP1
S100B
METTL25
CCDC59
E2F4
WASHC5
NSMCE2
TFEB
DOHH
VTA1
NMBR
OPA1
N6AMT1
RABGGTA
SASS6
NOTCH2
LUC7L2
POLR3B
FMC1-LUC7L2
FMC1
TRIB1
C1QA
RBM45
TESPA1
METTL6
EAF1
NFKBIA
RAB11FIP1
MARS1
ARHGAP9
BRIX1
PCNP
RASA1
RAB3GAP1
ZNF749
C18orf21
NUDT7
RPL29
SUGT1
MAGOHB
CDIPT
ETV6
KMT2B
PRKCI
MRPS15
TCF3
CNTRL
UNC45A
H4C6
LYNX1-SLURP2
LYNX1
MAPK1IP1L
ZKSCAN4
COX18
SIGLECL1
SH3TC1
PEX26
ZNF557
WNT2B
MRPL3
ADPRS
VIRMA
NEK4
TTC13
ARV1
ZCWPW2
AZI2
H3C8
TLR1
MRPL16
TOP3B
MRPS10
PSMC6
MRPL44
ZNF410
DGAT1
TMCO1
RPL23
PDCD6IP
C19orf53
YIPF2
TIMM29
TTC26
HARS2
HARS1
R3HCC1
COMMD4
P2RY6
KRT36
WDR70
SGF29
THEM4
TIMM21
FBXO15
SLC7A11
NDUFS3
KBTBD4
NUP54
SDHAF2
CPSF7
MX1
POLI
APOBR
LTN1
RUFY3
PTPN12
NCF4
FBP1
PRKCSH
CCDC151
UBE2F
VRK2
ZSCAN31
AVIL
ELOC
NSFL1C
POLE3
C9orf43
TMEM65
TBC1D13
EIF2B3
C8orf37
LIN37
DNAJB12
RPL31
BECN1
SFSWAP
HEATR5A
ERCC1
H4C2
KMT2E
F2RL3
CCNI
UFSP2
RPL17-C18orf32
RPL17
CCDC107
SULT1B1
LY9
IFI6
FAM160A1
GDAP1
PDSS1
SLFN12L
NKAPL
RASSF5
TNFRSF10A
SMC1B
RIBC2
STX3
MTERF4
H2BC21
H2AC20
H2AC21
RFX8
NPRL2
CYB561D2
WDR24
VPS25
RPL11
MTPN
LUZP6
SLC25A23
TBC1D5
HENMT1
PSMB8
UNK
THOC1
EEF2
TNFAIP8L2-SCNM1
TNFAIP8L2
ZNF3
RCOR3
SLC25A32
DCAF13
MTERF1
ANKRD13D
EIF3H
CD72
IKZF1
MED18
CHD1L
PRKAB2
ASB6
RAD23A
FLT3
POGLUT3
C10orf88
CCM2
SMARCA2
SLC33A1
RPL36
MSL2
GSK3A
TSFM
ARHGAP24
LIN54
WDFY1
DESI2
RAD54L2
ARL14EP
MAIP1
HINT3
RFESD
NUDT2
KIF24
CPQ
H3C11
ACBD6
EFCAB2
ZC3H4
EIF1B
PSMB7
RPL7A
MED22
RFX2
GPAT3
SERP1
EIF2A
PPCDC
EIF3G
NACA
PPP2CB
NUP153
TARBP2
CAB39
LST1
MARCHF7
FBXO34
RNASE2
USP30
H3C15
H3C14
UBE2V2
TMEM101
TIMM10
EIF3F
ZNF408
ARHGAP1
IQGAP2
CFAP298-TCP10L
CFAP298
EXOSC3
TRIM44
DNAJB2
BSDC1
SNRPE
TOMM22
ZNF573
FBXW7
CDC73
SNUPN
TRAM1
SUGP1
MAU2
SNF8
H2BC12
H2AC12
KATNBL1
RASSF2
ARL11
RIPK2
WDR87
SIPA1L3
ZNF333
PIGL
NFE2L2
MTMR6
RPF1
NTAN1
METTL18
C1orf112
AP1G1
TM2D1
RGS14
SNX14
C1RL
KASH5
TFB2M
CNST
STAMBPL1
HIGD2B
BBS4
RPRD2
KAZALD1
DBN1
C12orf43
VKORC1
CAPN15
MTBP
MRPL13
TMEM123
PIGBOS1
PIGB
HCLS1
HEXIM2
MCOLN1
CMTR1
CRADD
C1orf53
RFX3
DOCK2
GPR141
RRP15
RBM28
NDUFB3
FAM126B
SEC22B
ATP2B4
CGAS
ZC3H11A
NCBP3
GOLGA3
PLAGL1
OR8G2P
SMARCAL1
FBXL19
HEATR1
ATAD2
KMT2C
MAPKAPK3
NAGA
CISH
MED15
SNRPB
GABPB1
VAMP8
VIPAS39
AHSA1
ZNF527
TERF2
MRPS33
ATAD2B
KCTD18
E2F6
MS4A14
AP2B1
SH2B1
TUFM
CCDC77
ATP13A1
KDM5A
ZNF337
UHRF2
LOC112694756
CCL3
LARS2
IFIT1
AFF3
SYCP1
CCPG1
C15orf65
THOC5
OCIAD1
VPS29
RAD9B
H2BC8
H2AC8
LAPTM5
UEVLD
IFI35
DTNA
RPL38
CCZ1
TRIM25
FAM200B
DMTF1
REXO5
ERI2
RPS3
RPP14
HTD2
DMAP1
ZNF155
TTC4
PLD3
C17orf75
KLLN
RPL37A
RPS9
PTEN
C2CD5
RSU1
PGM2L1
SNRNP200
TMEM259
AARS2
MFSD3
STAM2
IL4I1
H1-5
H2AC16
NAIP
UBQLN4
LAMTOR2
ING3
ELOB
FKBP5
RPS15A
HMGN1
CENPH
SP140L
LTBR
INO80B
ANKRD17
SRSF7
JMJD1C
FPR1
PPP6C
RAB3C
RUVBL1
NELFB
IPO4
C1orf74
TNPO1
TRIM28
OAS2
ZW10