ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RBM39 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◣ RBM39: Average

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ RBM39: STRING

WDR74
H3C2
H2BC12
H2AC12
H4C11
SNRPB2
H2BC11
H2AC11
H4C12
H4C15
H4C14
SPATC1L
H2BC21
H2AC21
H2AC20
H2BC17
H2AC17
CCDC200
MTRNR2L2
EXOC2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTRNR2L8
PRDX1
TMEM242
H1-2
RPS12
NPAS4
H1-4
POLR3E
EIF1
PEX3
ADAT2
H2BC5
EEF1A1
STX16
H3-3B
SRSF7
SNX16
MRPL44
H2AC19
H2AC18
MED23
IQSEC3
FUS
KANSL3
TOP3B
NSFL1C
MAT2A
POLDIP3
PSMD3
SRSF2
MFSD11
CTNNB1
RPS20
DMAP1
ABCC6
MTRNR2L9
NXF1
CCNI
CALM2
SRSF6
IPO4
UBC
SLC9A1
RPL5
CPPED1
FAM53C
CDC25C
GTF2H2
PRMT5
SRSF3
PALB2
DCTN5
GTF2H2C
GTF2H2C_2
HSPA1B
MTIF2
ZBTB4
RBSN
POLR2A
ADARB1
P4HA1
H3C4
H2BC7
H2AC7
AAR2
RPSA
NME1
TRIP4
H2BC8
H2AC8
DDX1
MTF2
CBWD5
CBWD3
BRD2
RPS15A
PSMF1
PLEKHM3
DCAF10
JPT1
RPLP0
GTF2A1
CLTC
POLR2J3
MARCHF7
SLC39A3
H2BC14
H2AC14
METTL25
CCDC59
KDM8
CCDC88A
RPS3
H2BC13
H2AC13
HSPA5
ATF4
STX18
NUF2
PBLD
NOTCH2
HNRNPH3
EIF2D
ZSCAN12
INTS12
GSTCD
HNRNPA2B1
CBX3
MRPL39
ZC3H6
E2F6
NABP1
METTL9
KMT2E
FRA10AC1
USP30
CBWD6
COPS7B
HERPUD1
YARS1
S100PBP
BMS1
H4C3
H4C5
SLC24A1
TATDN3
NSL1
RPS2
RBM39
TMEM167B
ZNF76
NDUFS7
IER5
RAF1
RPS23
MTHFD2
ATP6AP1L
SCAND1
H3C13
H2BC18
MRPS23
H3C15
H3C14
NCOA7
ENOSF1
ZCCHC4
HSP90AB1
DPY19L4
SNRPB
RPLP1
WTAP
SOD2
ARL6IP1
TUBA1B
CYCS
H2BC4
H2AC6
TACO1
STAT3
H2BC15
H2AC15
TMEM41A
KMT2D
ACYP2
RABGGTA
INO80C
C12orf57
MTERF4
FAM98B
RPL23A
HNRNPAB
PCK2
NRL
PAXBP1
ZNF391
TBC1D19
SCFD1
PET117
KAT14
CCNC
SIRT4
TNFRSF21
NUP214
CSKMT
C11orf98
TAF1D
RPL37
RPL23
GSTA4
CCNL1
C11orf54
FAM133B
MRPS15
TUBA1C
UBE2D3
RBM28
MCL1
H2AX
ZSCAN30
RIF1
FOS
GTF2B
PRAME
NASP
ATR
TUBB4B
MAN2C1
ARL15
TTC4
RPL10A
MRPS31
ACTB
YDJC
EIF2B3
GBA
ALKBH3
SLC25A51
METTL8
DCAF17
NBPF1
CRKL
TEFM
RRP15
RPL19
RPL12
LRSAM1
MRPL3
GTF2IRD2B
ZNF609
TMEM230
TRA2B
THOC1
GTF3C3
GLUL
SSBP1
SF3A3
PPP2CB
LRRC37A3
LUC7L2
STX6
SLC35C2
VAMP4
SRSF1
PTCD1
CPSF4
KIF16B
C12orf73
ATF7IP2
AARS2
SLC30A6
NDUFC2-KCTD14
NDUFC2
EIF4G2
TMEM267
PABPC1
NUBP1
SMIM12
GDF15
TRIM25
SREK1IP1
DSTYK
CWC27
KPNB1
HSPE1-MOB4
HSPE1
HSPD1
MRPS33
EIF4A2
AJUBA
MTMR2
RPL32
H2BS1
H2AC4
GDAP1
SACM1L
PARK7
NBN
H4C2
DDX5
CEP95
SECISBP2L
PAFAH2
DCLRE1B
AP4B1
SLC39A10
RWDD1
TTPAL
NFE2L2
HNRNPH1
SEC14L1
RPS16
RPL31
PPIA
ERMARD
OXA1L
MTERF1
EIF4A3
C2CD5
DTD2
SURF6
MRPL16
HINT3
RPL15
NKIRAS1
MRPL40
HIRA
ANKRD36C
TIGD1
EIF4E2
CCT7
XKR7
PUM1
TTC26
RPS8
MKRN3
EFHB
DGUOK
TSC1
POLR3B
PCBP2
HEATR5A
GFI1B
UBE2S
TSGA10
RFXANK
CHMP4A
C17orf75
BORCS8-MEF2B
BORCS8
SNAPC5
USPL1
RNF6
PSMD14
HMGB1
CDK5RAP1
VPS52
TOR1AIP1
RPS18
MANBAL
SMARCD2
RBM45
GTF2IRD2
DIDO1
ATF3
TTI1
SFPQ
RPRD1B
LZTR1
RPL37A
TOB1
SYT7
MRPL21
IGHMBP2
TRPC4AP
DRG2
SRCAP
RTEL1
LOC730183
GINS3
CCAR2
RTN4
FAM227B
DTWD1
FAN1
RGPD8
RGPD6
RGPD5
HMGA1
ZC3H15
ARHGEF12
NPM1
NANP
HTR5A
ITGB3BP
GTF2H4
ERCC6L2
EFCAB7
ASH1L
DUSP1
DDX18
SLC25A21
ZCCHC3
SAR1B
POLG
YTHDF2
EIF4B
CRB1
C10orf88
ZMPSTE24
ZKSCAN2
WDR36
PPP4R3B
RPL3
GOSR2
NEU1
ITPR1
RPS7
PIGBOS1
PIGB
BRWD1
TNPO3
ZNFX1
U2SURP
TFRC
LDHA
GTPBP10
ZFP64
SLC44A1
BNIP1
ACBD6
UBE2F
RUSF1
RMDN2
GABPB1
DR1
REXO5
ERI2
DHRS4
CITED2
ATXN7L2
SLC16A1
NACA
BRF2
AURKAIP1
NFYC
IARS1
CDH24
ARID1A
VTA1
NOMO2
NMBR
HNRNPC
FMC1-LUC7L2
FMC1
DDX19B
AARS1
SLC35B1
LRRC59
HEXIM1
COMMD1
CCT4
ZNF337
TOB2
SREK1
TMEM18
TAF15
KIAA1586
HSPA6
C19orf48
ASXL1
ZCWPW1
TMEM222
TJP3
PSMD5
PPIH
MEPCE
AGBL3
TANK
CSDE1
C6orf226
UBOX5
RAD54L
NDUFS3
KBTBD4
FOXJ3
FASTKD5
E2F3
ANKRD36B
THAP9
SEC31A
OAZ1
AFF1
ZNF384
RPS10-NUDT3
RPS10
DNAJA1
APTX
TRUB2
NECAP2
KLHDC10
COQ4
CHGB
CCDC90B
SUGCT
PARP2
MPLKIP
OLA1
EDC4
LTA4H
EIF2S2
RPL11
PHF19
METAP1D
ZSCAN31
VPS72
SKP1
LRIF1
TMEM101
RAB37
IMMP2L
DDX3X
SPOCD1
CIRBP
SLC1A5
TMBIM4
UBE2L3
PNP
PIP4K2B
MRPL48
MOB4
KDM3A
ADPRHL1
SGF29
PPP6R3
ITGAV
INO80D
DARS1
ZCCHC7
RPL28
NR1H3
GMNN
DHRS4L2
CCDC97
ARL14EP
ACP2
TMA16
CBWD1
THUMPD1
SMARCE1
MST1
SPHK2
SNX5
RPL27
RPL18
NDE1
MGME1
MEMO1
MARF1
BIRC6
ZNF518A
RPL38
NET1
EGR1
ANKRD46
UGP2
SEC13
RCOR3
PDE11A
ACIN1
ZNF184
TANGO6
HECTD1
CHMP7
C2orf88
BTG1
TCF12
RPL7A
PPP6R1
PLK1
MRPL58
MMADHC
MED22
BECN1
VPS13B
RPS6
PSMC5
INO80B
FTSJ3
EEF2K
CCN2
ZKSCAN8
PRORP
PPP2R3C
PIGC
ATXN2L
AP1G2
ALG1
ZNF843
EIF1AD
DCAF11
BANF1
ALG10
SCML1
FUT10
CHEK1
RGPD2
NOMO3
CTR9
WDR11
SRSF11
SON
RPL9
PRMT3
LIAS
GART
CKS2
ACVR1
RBBP6
PSMA6
POLR3D
MAGEF1
R3HCC1
LSR
BCAR3
TUBGCP3
SLX4IP
RPS27
GPN3
GID8
FTL
FAM216A
DCP1A
BCL2L2-PABPN1
BCL2L2
TRDMT1
REV3L
PUS10
PEX13
PDRG1
MIA2
MED15
CCNG2
BAG6
APOM
XRN2
SLITRK3
RPL22L1
PPP1R10
MRPS18B
INTS6
H4C4
FBXW2
ANKRD36
AMBRA1
WDR31
REPS1
JUNB
CRBN
THADA
CLK1
VPS16
THAP7
PCED1A
ABT1
RPN2
MROH8
C11orf49
RREB1
RBBP5
MAPK1
IRF9
FOSL1
COQ7
AGK
THUMPD3
UBFD1
GOLM2
EARS2
CZIB
TPR
SLC38A2
SLC33A1
ODR4
GORASP2
FER
RGL2
PPIL2
PARPBP
NUP37
HAUS4
FZD1
DDX39B
SIRT5
RANBP9
PTP4A1
CSNK2A1
SF3B3
SENP1
RDH14
PFKM
COG4
POMZP3
PCIF1
NAGK
INTS2
DDAH2
TSFM
TMEM209
SSBP2
POU2F1
MTX2
FAM83D
DHRS4L1
ZNF219
ZC3HC1
SND1
RPS3A
MYL12A
WASHC1
TMEM94
SLC3A2
SDCBP
MRTO4
HSP90AA1
GABPA
EMC1
ATP5PF
AP1G1
NCOA3
JRKL
HUS1
CFL2
CENPC
CCDC82
MED4
EXOSC6
STXBP3
STAT1
SEC23A
RPS26
MDP1
KANSL1
AQR
TINF2
SUPT3H
STAMBP
PTPN2
IMMT
ATAD2
STAM2
RTL10
NT5DC1
ISOC1
GNB1L
ZSCAN9
SDHAF3
PYROXD1
OTUD7B
NCDN
KIAA0319L
HSPA1L
HSPA1A
DDX21
AHCTF1
WWOX
VWA8
SMG7
SMG5
RBM34
PMPCB
PGBD1
PBK
NXT1
CSTF1
AURKA
ZBTB45
SLC20A1
NUDCD3
DPY30
ZNF451
ZNF248
PCTP
MAIP1
KPNA2
IMPDH2
IFRD1
HSPA9
ZNF668
ZNF646
ZKSCAN4
KIF15
KIAA1143
EFTUD2
CCDC103
CASC3
KAT7
ELK4
CHMP3
TRMT11
KLHL22
ADI1
VRK2
TBC1D5
SLX1B
SLX1A
RRN3
RBL1
PHIP
C14orf119
BOLA2-SMG1P6
BOLA2B
BOLA2
FN1
EIF3C
RMND5A
PRICKLE4
MYLIP
GFOD2
FRS3
XPOT
TPK1
NCL
XRCC4
TMEM167A
SLC36A1
PTPN4
POLR2C
MAML3
LINC02210-CRHR1
ING3
TEX14
TBP
RNF141
RAD51C
PSMB1
POLR2J2
PKP4
PELO
NUDT4B
NUDT4
ITGA1
CCDC148
AGL
ZFHX2
ZBED8
TOX4
TAF3
SYS1
RPL27A
RAB2B
PPM1D
FANCD2
COG2
CMTR2
ZNF33B
TTC30B
MRPS11
MRPL46
LACTB
KAT6A
ACBD4
RPS13
HEXIM2
ATP5MC2
STXBP4
RNF146
DPH1
CUL7
COX11
TTC21B
SNRPE
RNPS1
DDIT4
ADRA1D
ZSCAN25
SDR39U1
REXO4
RALGAPA1
RAD54L2
PTRHD1
PSMC3
PRR3
PPP1R11
MTHFD2L
MRPL30
MITD1
HDAC4
GNL1
CENPO
ZSCAN21
ZFP1
TFAM
PRADC1
MICU2
IST1
DENR
VPS25
TUFT1
TBPL1
SF3B6
PRKAG1
LIMS1
FAM228B
FAM149B1
ECD
CETN3
WDR43
SRP54
SPDYC
NOP56
ID1
GFM2
TMEM254
SELENOH
KDM3B
HDDC2
FBXO4
ANKRD17
ZNF839
UTP4
TOMM5
TIMM17A
PPIL4
DERPC
CHTF8
CCT2
RBMXL1
KYAT3
FBXO8
CEP44
CCNG1
ZNF747
PPP5D1
NOMO1
LMAN1
FERMT1
CALM3
AGFG1
SCARB1
RPS24
NUFIP2
H2AZ1
GPR89A
ADPGK
THTPA
PHF3
NOL10
MIPOL1
RTF2
RPL17-C18orf32
RPL17
ISOC2
HOMEZ
GBE1
C5orf24
ZNF574
TOMM6
SNRPD1
SESN2
GGA2
WIPF2
TMEM186
TMEM177
TEX10
SERBP1
PSMB3
PMM2
PFDN4
MRPL52
MRPL17
MDM4
DDX59
CHD8
CDC7
ATP5F1E
ASNS
SNX17
NSUN4
H4C8
EIF2B4
CCT8
ANKRD40
ZNF408
TDP2
TAOK1
SLC9A8
RPL22
KMT2A
DYNLRB1
BBS1
ARHGAP1
ACOT13
ZBTB20
TMEM168
LANCL1
HMGN4
ECHDC1