ChIP-Atlas: Target genes

Potential target genes for CBX3

Query protein: CBX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CBX3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CBX3's Target genes

◣ CBX3: Average

◢ SRX055346: HCT 116

◢ SRX055348: HCT 116

◢ SRX055353: HCT 116

◢ SRX055354: HCT 116

◢ SRX130495: HCT 116

◢ SRX130496: HCT 116

◢ SRX190214: HCT 116

◢ SRX116427: K-562

◢ SRX186764: K-562

◢ SRX190188: K-562

◢ CBX3: STRING

MTRNR2L2
MTRNR2L8
WDR74
RGPD2
RGPD1
MTRNR2L9
POLR3E
TRIP4
RFC1
COX16
INTS12
GSTCD
NPAS4
HTR5A
SELENOH
SSBP1
DMAP1
WDR36
TBC1D19
RPS7
DHX40
PIK3R3
UTP11
TACO1
RABGAP1
NUF2
MRPS18C
HELQ
SF3A3
NAT10
VPS29
RAD9B
BSDC1
COX18
MTRNR2L10
RNF130
ABCA3
SMG8
FLOT1
GTF3C3
STX16
ALKBH3
NME1
AIP
TOP3B
ZCCHC7
CCDC200
ZCWPW1
MEPCE
TTC26
WDR11
CDC16
IER3
MRPL44
DSTYK
ALG10B
FRA10AC1
RBBP5
SLC37A4
XKR9
LACTB2
SAR1B
COMMD2
KDM3B
LEMD3
SEC22B
CCAR2
IFTAP
C11orf49
VTA1
NMBR
RPA2
H4C3
PEX3
ADAT2
SDHAF3
DCP1A
KANSL3
MED23
KRR1
ATL3
UCHL5
RO60
MTERF4
TMEM242
OPA1
MNAT1
FMNL3
TCERG1
RPL37
PAXBP1
DNAJC11
DNLZ
CDK5RAP1
NSUN5
MRPL30
MITD1
KDM1A
MTF2
TPRKB
USP30
DDX18
C10orf88
GTF2H2
EIF2B3
HLTF
TATDN3
NSL1
CCNC
TAMM41
WASHC2C
CHD8
SF3B6
FAM228B
H4C14
SMIM12
DNAJC25-GNG10
DNAJC25
ZC3H10
MTMR9
BMS1
UTP3
HMGB1
TMEM41A
USPL1
MTOR
INTS5
ZBTB40
DCAF10
GALK2
KLHL20
TSFM
METTL25
CCDC59
TARS2
CYB5R4
MTERF1
CLUAP1
BNIP1
PPP6C
SLC44A1
NUP54
NRBF2
ATP5MC3
SLC33A1
CYRIB
STX18
SPOCD1
NDUFS3
KBTBD4
EIF2D
LAMTOR5
H4C11
FAM227B
DTWD1
TMEM101
AK2
PLEKHM3
POLR1F
MRPL21
IGHMBP2
AAR2
AGK
TTC4
IRGM
SLC35B1
ZFR
NOL7
IPO4
SRFBP1
KCNJ15
DPY19L4
ZMPSTE24
WDR24
PPIG
TTI2
FAM133B
DHDDS
AATF
AARS2
HIF1AN
LRRC59
DRG2
WDR70
UBE4A
PAFAH2
H4C15
GFM1
EIF3F
WDR31
EXOSC6
ZNF280C
ZNF292
FXN
LSG1
SRRM3
TRUB1
ZNF212
PMVK
STXBP3
C8orf37
RAD54L2
USP37
CNOT9
INO80C
SPOP
MRPL16
CEP350
CEP295
SLC24A1
SGTA
RPL5
PPFIA4
TMEM222
RINT1
NDUFS7
CHMP7
EIF1AD
BANF1
NUP107
SNAP47
JMJD4
DHX8
ZNF791
ZNF490
NOC3L
USH1G
OTOP2
TUT1
BBS1
TIMM22
CWC25
SECISBP2L
NDUFC2-KCTD14
NDUFC2
NOP16
HIGD2A
EBNA1BP2
CFAP57
FOXJ3
CORO1C
SEC13
CTNNB1
RANBP2
PSMB7
MTIF2
SLC35A3
MAPKBP1
COPS2
CCDC126
ARHGAP39
NOS3
LARP1
SLC25A51
RNF216
C17orf75
NDUFA12
ALG10
TEFM
CCNL1
TATDN2
THUMPD1
CRB1
ZC3HC1
KDM3A
LOC112694756
ZNF579
TOR1AIP1
CCDC88A
MTR
RBM28
PPIP5K2
NR1H2
ATP5MC2
TMA16
C18orf21
RPS14
DIABLO
ZSCAN22
GGACT
DUS1L
NECAP2
NUP214
YJU2
ITGB3BP
EFCAB7
STXBP2
NDUFAF5
ESF1
CCDC107
ARL14EP
TRMT61B
FEM1C
GBA
MAGOH
ANAPC5
G6PC3
HDAC2
ABLIM3
JRK
TCFL5
CDKN2AIPNL
AURKAIP1
R3HCC1
PNPT1
MRPS23
ZNF562
STEAP1B
NEK3
MTRNR2L6
GOT2
MRPS33
RPF1
RBM45
ZNF280D
CC2D1A
C19orf57
PDE12
RANBP3
SDAD1
PSMC1
DFFB
CEP104
PRRG2
NOSIP
MRPL39
RPS3A
IQSEC3
H4C12
EPRS1
AQR
TMED1
TBC1D15
CEP85
JMJD1C
POLR3B
DET1
LUC7L2
FMC1-LUC7L2
FMC1
ANKRD46
ZNF165
TASOR2
HINT3
RAB18
ZSCAN25
RBSN
DNAJC2
C1orf74
H4C4
TIGD6
HMGXB3
CCDC174
PBX3
MRPS15
MRPL1
TTC32
RPL38
FANCD2
FRG1
MED18
ZFYVE27
MRPL3
C12orf73
BAZ2A
RPS20
GTF2H2C_2
GTF2H2C
NOC4L
DDX51
RHOG
PARL
DNAJC24
DCDC1
RARS1
CBWD5
SMG5
TUBGCP3
STAT3
H4C2
EIF3E
COX7A2
IMPDH2
ZNF609
MKRN3
DDX46
NMNAT1
LZIC
PHF20
ALKBH2
SECISBP2
RRP15
KIF15
KIAA1143
SLC35A4
SCNM1
RPP14
LYSMD1
KRBA2
HTD2
EXD2
C19orf53
APBB3
POLR2J3
PSMD9
HPD
CDKL3
MFSD4B
KNL1
RNF43
MRPL24
INO80B
POLDIP3
RPL27
GOSR1
GFM2
MRPS31
TRIAP1
MRPL40
HIRA
RPS13
TRMO
NAF1
SNRPB
SNX16
ACAD9
SNRPB2
ZNF3
PNPO
NOL11
LRRC37A3
DUS2
DDX28
CBWD3
SCAF11
MAP3K7
RUVBL1
MRPL55
GRPEL2
SLC30A6
UBE2Q1
FBXO28
COPS4
NCOA7
ZNF221
MLF1
BRF2
MRPS14
RASAL2
NCEH1
TAF1C
ARL8B
SLC29A3
EZH1
GORASP2
EIF5A2
ARMC1
SLC39A3
CCDC86
ZNF268
PDE11A
GEMIN5
UBXN4
KATNA1
ADPRS
MFAP3
FAM114A2
YIPF2
TIMM29
SPRYD7
LARS2
GPR180
YPEL3
CDIPT
AEBP2
TRA2B
NUTM1
NOP10
DDIT4
NR1H3
ACP2
SMARCD2
MTRNR2L1
TOMM20
TMEM170A
TMEM167B
KCTD5
AGGF1
TTC14
FAM76A
TMEM259
RC3H2
PDIA5
FASTKD1
ASB6
TTC21B
NDUFB7
LDAH
TRIM59
SAAL1
RPL31
DNAJB12
SREK1IP1
CWC27
ARHGAP29
SMC3
RPTOR
RIOK2
IPO11
APTX
WTAP
SOD2
SNRPE
HEATR1
GPAM
SLC25A32
DCAF13
CDC73
FAM135A
EEFSEC
CCNA2
TVP23B
EIF3B
VPS25
TCHP
PMPCB
FAM111A
STK25
NCBP2AS2
NCBP2
TIGD1
EIF4E2
LIN54
SLC9A1
OGFOD2
METTL2B
CEP120
NOLC1
WASHC5
RBM42
NSMCE2
MMADHC
SRSF7
ADSS2
EVI5
GTF2B
SMG7
OSCAR
NDUFA3
KIF2A
KAT7
POLR2J
NLRX1
CDIP1
RMND1
ARMT1
CSRNP1
LEMD2
PPIE
C8orf33
PCBP2
KXD1
FAAH
ANKRD12
SRP68
MFAP3L
CENPF
HEXIM1
MCOLN1
NFYC
DHRS13
ANAPC11
ALYREF
EBAG9
TAOK2
NUP155
HPCA
GUSB
SRP9
EDC4
STK38L
PTPN4
ATR
ERLIN2
ZNF721
TBC1D13
PIGG
TFPT
PRPF31
PPP6R1
GINS3
TSPAN10
TRNAU1AP
NPLOC4
RTTN
RAB3GAP2
AP4E1
PRAME
VIRMA
SH3GL1
PBK
CSTF3
SKP2
LMBRD2
TCTN3
LAMP1
TRUB2
RBM48
PRIM2
PEX1
COQ4
KPNB1
STMP1
ZNF572
ZNF197
SAMD4B
COASY
SEC14L1
COA3
CNTD1
COPS7B
UBOX5
FASTKD5
FZD1
DYM
CWF19L1
VPS39
ARPP19
TTC1
POT1
ZCCHC4
SCFD1
LAS1L
TXNDC9
PSMD3
NUP153
EIF5B
METTL2A
IKZF5
ACADSB
MED4
DCLRE1B
AP4B1
SMIM8
MIA3
NOTCH2NLC
DNAJC19
CFAP20
COIL
FAF1
GID8
FBXW9
DIDO1
FBXO38
PRKACA
COMMD9
DDX41
ZNF554
SNRPD1
NUS1
MRPL58
MRPL53
MOB4
ADPRHL1
SCAMP3
PPM1H
NOP14
GRK4
ZNF594
WDR48
TRIB1
SCN11A
NR2C1
ARL6IP1
BOD1L1
SNF8
DDX1
TTC39A
CENPW
TJP3
ZKSCAN4
TMEM106B
PC
DRAP1
C11orf68
SLC39A11
POLR2C
C2CD5
ZNF226
GTF2H3
EIF2B1
COG2
ATG5
ZNF205
RAB30
KLHL22
MMUT
CFAP69
CENPQ
SUGCT
MPLKIP
ZMAT1
MTBP
MRPL13
SCP2
PUS10
PEX13
EEF2K
ACYP2
TPK1
SNX17
EIF2B4
ADNP
LTA4H
ANKRD13A
TM9SF4
RPL26L1
TDRD7
POLR2K
NBN
SACM1L
H2BC5
ZBTB45
SUPT7L
SLC4A1AP
PRKCE
ILF3
SRSF11
RAB5IF
LRRC40
PSMF1
LONP2
ABCC11
TSSC4
SPG11
SIRT4
FAM98B
DHX16
C6orf89
PIGL
TBL3
B3GAT3
SUMF1
KLHL12
FEM1B
E2F6
MTFR2
EML4
SIRT5
MPHOSPH10
MCEE
CCDC90B
F11R
CAAP1
USP4
ANGEL1
YTHDC2
SUPT4H1
NIP7
MIGA1
MBTPS2
COG8
SYCE2
PRPF18
PPA2
NKAP
MKRN1
TMEM68
TGS1
POLR2M
MLEC
IRF9
VPS33A
RIF1
PARK7
MZT1
BORA
NOL8
CENPP
MTRES1
EMC4
SCAND1
RPL29
CUEDC2
ZMYM6
PTP4A2
FANCI
ZSCAN30
TAF5
NUDCD1
TRAM1
HAGH
FAHD1
SPRED2
PPP4R3B
RPS15
CRBN
CT45A7
CT45A6
DHX33
ANKRD17
NOTCH2NLB
NOTCH2NLA
KMT2C
POLG
POLE4
POMZP3
BUD13
GPN3
FAM216A
FAM200A
RNF166
PDCD6
GAN
CTU2
BUB1B
COQ3
BCAS2
AP2A2
KAT5
UTP25
HNRNPA1L2
SNAPC5
MAPKAPK5
SURF6
MEST
MAP2K1
HIBCH
XKR7
FAM13A
MAP1LC3C
PTCD1
CPSF4
TRIM46
KRTCAP2
ZNF391
RBM17
MEX3D
TRMT44
HUS1
ACOX3
TRIM44
POLR1H
MTHFD2L
SFT2D3
CDK12
ERRFI1
BANP
FNTB
ZSCAN9
RNF32
RAD54L
SRSF1
EIF3G
SPRYD4
METAP2
UQCC1
MRPS17
MFSD14B
ECT2
TTC33
KIFC1
GTF2H4
B4GAT1
TTLL11
RPL22
SF3B5
RRP1B
HSF2BP
TDP2
SKAP2
ACOT13
STIM2
GTPBP10
EPB41L4B
ARHGEF12