ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX244180 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◣ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

SMPD3
FASTKD1
COX7C
PHB
IFRD2
BTRC
NUDCD1
ZNF749
KBTBD6
DDX23
CALR3
C19orf44
ZNF225
TMTC3
CEP290
CTU1
C19orf53
GSPT1
INVS
ERP44
TMEM115
ST3GAL2
TCEA2
NTAN1
BOD1
PAFAH2
BOLA1
CLPB
SLC35B4
SCRIB
CCDC146
STK25
NUDT13
MED15
ZNF189
MRPL50
PNKD
AAMP
LARS1
GFUS
ATP5PO
PANK4
SNX17
EIF2B4
TTC33
ING4
C1orf159
TNFAIP1
IFT20
ZFYVE1
TSNAXIP1
RANBP10
UBAC1
CCP110
TTC13
ARV1
RPIA
ZFYVE28
CFAP99
SYMPK
FOXA3
LRRC29
MMACHC
KBTBD7
ZNF56
AHCYL2
C16orf91
ATP5F1D
AP2S1
PPP1R12B
SMUG1
TTC1
PPRC1
CNIH4
GTF2H4
ORMDL3
ZNF235
CLEC16A
SIRT2
NFKBIB
PEMT
RALBP1
PPP1R12C
CLDND1
GATB
WDR87
SIPA1L3
CTF1
RPL8
TSC2
NTHL1
SNX27
ZNF169
TRAPPC3
BUB1B
ZNF420
ZSCAN22
SCNM1
LYSMD1
GTPBP2
MAD2L1BP
TMEM102
STAU1
LETM1
NOP14
GRK4
ZFYVE19
DNAJC17
BUB3
TMEM127
CIAO1
PSMD11
ZNF350
ZNF337
UBR2
TFEB
ABCF2-H2BE1
ABCF2
GPKOW
TIMM21
FBXO15
ZNF354A
CRTC2
VCPIP1
C8orf44-SGK3
ZNF384
NFXL1
MARS1
ARHGAP9
RPGRIP1L
FTO
NPRL2
CYB561D2
TMEM11
SMARCAL1
THRAP3
ING3
TMEM59
TCEANC2
ZNF444
NDUFS2
RAD51AP2
RAB5C
TBL3
CCDC174
SEPTIN9
DYNC1I2
UFSP2
CDCA3
JOSD2
POLR2E
AKIRIN2
FAM185A
ZNF547
TRAPPC2B
SLMAP
PHF13
CLP1
THYN1
ACAD8
AP2M1
ZNF37A
SSBP1
DESI2
PRRG2
NOSIP
CWC22
ZNF32
TSSC4
ENOX2
CHCHD3
TRAK2
STRADB
KAT7
OSCAR
NDUFA3
DDX49
COPE
STK17A
RBM6
LMNB2
RAB1A
UBQLN4
LAMTOR2
ZNF554
ZNF2
RAB29
MICOS13
HSD11B1L
BANP
EXOC4
CHMP4B
DSTYK
SLC4A2
CDK5
UTP11
CNOT1
DCAKD
NMT1
CCDC150
ZNF419
DFFA
PSMC4
SLC25A19
SOX6
C11orf58
RIC8B
ZC3H11A
MED27
PEX26
FBXO46
MXI1
HTRA2
WRNIP1
SCAF1
UNK
PSMD2
WNK1
SERPINI1
PDCD10
FEM1A
COMMD9
ZNF224
MRPL24
PHF12
VPS50
HEPACAM2
RALGAPA2
B3GALNT2
ZNF133
PANK3
FDPS
AURKAIP1
ZNF343
RPL18A
FBXW11
TMEM101
ZW10
SEC61A1
ZNF527
IPPK
ELOC
FBXO48
APLF
CAPN15
RPS20
ACTR1A
SUFU
KBTBD8
SSR3
USP48
NCDN
KIAA0319L
PSMD4
ZNF230
VPS4B
GPT2
VIPAS39
AHSA1
TFPT
PRPF31
RABAC1
KMT2B
GPANK1
CSNK2B
PA2G4
PCM1
GINS3
RPS6KB2
RANGAP1
CNOT4
TMEM245
WBP2
VAPA
NDUFB5
MRPL47
USP31
UBE2Q1
TMEM43
CHCHD4
ZNF484
ZNF585A
MED11
WAPL
INTS1
ZNF773
PTDSS2
PGBD4
EMC7
UBL7
WDPCP
MDH1
GID4
ATPAF2
UCHL5
RO60
LEMD2
PHB2
RPS13
TMEM160
RPS26
SCAMP4
ADAT3
DDX47
DCAF1
SCAMP3
PSMB4
CCDC90B
SSR2
ZNF25
ZNF586
IGSF8
RPS3
PRR14
FAM193A
TOR1AIP1
RETSAT
ELMOD3
COPS7B
PDE6D
L3MBTL2
NFKBIL1
ATP6V1G2
LTA4H
ZNF599
EIF1B
METTL3
PRCC
GFM1
C12orf43
SKIV2L
NELFE
ZNF451
CNOT6
CTDP1
RPS7
C1orf109
NUP205
BICD2
USP35
KCTD21
TMEM33
SYPL1
CDK5RAP2
CIAO2A
ZNF416
GEMIN6
TBX6
ZNF776
PES1
ZNF226
PIGU
ZNF747
ILF3
THAP1
COPS7A
ZNF17
RACGAP1
TXNDC9
EIF5B
DNAJC28
TIMM13
CDK8
WDR53
FBXO45
ZCCHC8
RPL34
PUS3
DDX25
EXOSC4
GUSB
DEDD
HSPA13
RAB30
DNM1L
NOLC1
WASF1
CDC40
ITPR1
CARS1
XPOT
BET1
PHF23
TOGARAM1
KLHL28
TMEM186
PMM2
KATNB1
PTBP1
SEC11C
MORF4L1
SDCCAG8
CEP170
ZNF805
PSMB6
UBA1
MED23
THOC6
HCFC1R1
EIF2S2
WASHC3
METTL26
PNPLA6
INTS9
HMBOX1
ACLY
ZNF227
RAB3C
FAM222A
DCP1A
QTRT2
CCDC191
INO80B
SKP2
LMBRD2
MAX
ZNF221
TMEM69
GPBP1L1
NUP153
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TRMT1L
SWT1
ZGPAT
ARFRP1
PRAF2
VEZT
FGD6
RBL1
TMEM94
TERF2
ABCC5
TRAF7
CRK
SNRPE
RPP40
ADSS2
KHDC4
CFAP410
NARS1
NUF2
ZNF862
SUGP1
MAU2
MRPL20
TXNL4B
DHX38
RPS27
SF3A3
ZNF584
ZNF155
BOD1L1
SEL1L
ARMH3
TMEM143
SYNGR4
RPL23A
ZNF567
TMED9
NOP53
NKIRAS1
RPL15
ZNF548
BDP1
MAF1
GPR108
SPHK2
RPL18
GALM
ZMAT5
UQCR10
DGAT1
MITF
SLC38A9
SERP1
EIF2A
DPM3
OPA1
ZNF277
DOCK4
ZNF45
RAB7A
AHCTF1
TRUB1
AQR
LUC7L
TSNAX
MGRN1
CCDC124
ZBTB7A
CAND1
SUCLG1
PPP6C
ZNF764
DPH2
STRN
PEX12
LIN37
MEN1
UBA52
RBL2
DARS2
CENPL
ZCCHC4
SF3B2
IPO7
ALKBH8
FBXL18
TSACC
CCT3
CNPY2
SMN2
SMN1
CWC25
VRK1
CSRNP2
SH2D6
DOHH
CCDC117
ZDHHC16
EXOSC1
CXXC1
EIF3D
CANT1
PPP1R7
PASK
ZNF417
SAP30
CLPP
IPO8
CHCHD6
TMEM199
POLDIP2
ABRAXAS2
TOR2A
FAM228B
SF3B6
NCBP2AS2
NCBP2
PRKCI
POLRMT
RPL27
PSMA2
DHX8
SHPK
CTNS
SLC25A44
MRPS16
RAB8B
CUEDC2
OSBPL11
IFRD1
ASXL1
COPS8
BLOC1S5
TOR1A
INTS4
EMSY
ZNF691
HEXIM2
ZSWIM9
LIG1
BIRC5
PSMD10
ATG4A
LSG1
PUM3
SCYL3
RTEL1
FBXO38
FBXL19
MEA1
WDTC1
CIAO3
CAPN10
NUMA1
LRTOMT
VKORC1
HBP1
CDC25C
FAM53C
SESN1
CEP57L1
ALG10B
ZNF550
ZNF571
ZNF540
SUPT4H1
ZNF304
SMG5
RPS3A
ZNF684
ZSCAN5A
SETMAR
DUS3L
FBXO9
ESCO2
CD2BP2
ZNF513
SPNS1
REXO2
ZNF140
CDK9
TCOF1
CMPK1
PPP1R13L
POLR1G
SLC37A3
BABAM1
TMEM109
PNISR
GALK2
COPS2
SHLD1
CTNNBL1
DPM2
ZNF628
TOMM22
ARPP19
RBM41
SNIP1
DAZAP1
ZMAT2
AP2B1
ZNF500
SNAPIN
ZNF317
APH1A
TSN
CCAR2
FAM149B1
ECD
ITSN1
CRYZL1
NCLN
EIF3C
EIF3CL
MRPS25
ZNF436
WIZ
ZNF211
MRPL54
APBA3
ZNF180
OAZ3
MACC1
TMEM150A
PSMC3
DPP9
SASS6
ZSCAN32
ZNF174
CBR4
DMAC1
NAPB
ELP6
TOE1
MUTYH
HIRIP3
CCDC77
GGPS1
ARID4B
TMEM147
MVB12A
FAM168A
RC3H2
ZNF268
RAB1B
USP15
TRABD
CFL1
TPGS1
UBE2V1
UBE2N
PARK7
RCAN1
ZNF165
GMPPA
TMEM222
TM9SF4
MRPS22
DYNC2LI1
TIMM22
RAD52
FCSK
SDF4
B3GALT6
HSPH1
STX10
IER2
TTC31
CCDC142
ZNF774
CAMLG
WDR46
PFDN6
ETFDH
C4orf46
MRPL11
SPC25
ABLIM2
ADO
ATG4C
CACTIN
ZNF772
ACP6
NAA38
CYB5D1
ZNF286A
TAF8
RPL29
SFXN5
MTR
SNAPC3
DNAJC14
YWHAG
UFD1
CDC45
NDUFS3
KBTBD4
RPS19
NR6A1
ANGEL2
AKAP8
DNAJC11
MBD1
WRAP73
TRMT2A
RANBP1
SUCO
PRKCSH
CCDC151
ZBTB45
EIF3F
SMIM13
B4GALT7
PSMD3
XAB2
VPS41
SLC33A1
MIA3
TTLL11
HSP90B1
RBBP5
COG2
SUPT5H
BIVM
POGLUT2
TMEM230
ZNF565
ZNF146
ATE1
N4BP2L2
EDEM3
UCK1
RPL12
LRSAM1
YY1AP1
DAP3
ATP5MF-PTCD1
ATP5MF
TMEM258
FEN1
SNRPB2
PRPF4
CDC26
ZRANB3
R3HDM1
NICN1
LCORL
SPEF1
IPO13
KIF15
KIAA1143
ZNF446
CEP350
GPR137
ZC3H10
C7orf25
IZUMO1
RPS23
ATP6AP1L
KPTN
PRPSAP1
CDC34
FAM207A
RPL37
EXO1
TUT1
RDH14
NME1
NUTF2
CENPT
NUP107
SSNA1
ANAPC2
CCNL1
GAPVD1
ZUP1
ZNF850
YIPF2
TIMM29
MYBL1
MRPL19
KNSTRN
RPP30
LRPPRC
MARCHF5
CPEB3
GFM2
SART1
RWDD1
REXO1
ZNF460
PCNX3
MAP3K11
NEDD8-MDP1
NEDD8
GMPR2
TRMT10A
MTTP
MPI
TTC37
ARSK
MAMSTR
CDCA8
ERI3
JTB
CDK19
AMD1
NUS1
TSNARE1
KIAA0930
SMIM30
WDR18
RPL22
DHX30
TAB3
PPME1
C2CD3
ZNF26
CIZ1
DNM1
CDC6
METTL18
C1orf112
RNF121
LOC100133315
TMEM214
ZNF181
CEP128
ZNFX1
SETDB1
PAOX
SERBP1
FIS1
TIMMDC1
MTMR9
ADAT1
NDUFS7
DNAJA3
TPR
ODR4
ZNF324B
DHX33
RNASEH2A
COA3
CNTD1
NUP214
TTC30A
NDUFB10
KCTD5
C8orf76
UBE2J2
SHOC2
BBIP1
MAP3K13
DTX2
UBE2D1
TIPRL
LRRC47
CLINT1
XPO6
SLC30A6
NFATC3
YJU2
KLHL24
ZNF668
ZNF646
PEAK1
HMG20A
METTL25
CCDC59
NUCB1
AKT1S1
TBC1D17
EIF2D
CC2D1A
C19orf57
AP5S1
SND1
RPTOR
KAT8
HSCB
CHEK2
PURB
MYL6B
LRPAP1
GON4L
R3HCC1L
RNASEH2C
ARHGEF1
DIAPH1
OTUD4
FAM193B
THAP4
ATG4B
MYORG
IQCH
AAGAB
ZNF79
GHITM
MRPS23
XRRA1
SPCS2
PPP2R5B
SIRT4
TMCO1
NDUFA2
IK
KLHL20
C18orf25
PHLPP1
ZNF134
RBM28
LRRC8A
KYAT1
DMAP1
ATP13A1
NDUFV1
ZNF688
FAM32A
MCM3
NMNAT1
LZIC
MINDY1
PRUNE1
SLC35A5
ATG3
CSNK2A1
ABCF3
GDAP1
TIAL1
ZNF721
PIGG
PLEKHA1
SYT5
POLR1B
AHCY
PGM2L1
METTL17
YKT6
FTSJ1
LRGUK
TTC30B
LCMT1
BRIX1
TARDBP
SAMM50
NIP7
COG8
TTI2
ALKBH3
PDE4DIP
SMIM11B
SMIM11A
PAK1IP1
C6orf52
CYCS
POLR2J3
TPRKB
CIC
POLR2H
GSK3A
PPIP5K2
SNX16
PSMF1
NR1H2
PTRHD1
CENPO
FKBP1A
ZNF551
MCM10
LMNA
MEX3A
NOP16