ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327758 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◣ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

IFRD2
DDX23
BOD1
TMEM115
PHB
CALR3
C19orf44
LARS1
GSPT1
TCEA2
AHCYL2
ORMDL3
PNKD
AAMP
SCNM1
LYSMD1
PPP1R12B
MMACHC
CLPB
TMTC3
CEP290
ZNF225
ST3GAL2
CHMP4B
SMPD3
CTU1
NTAN1
PAFAH2
BTRC
SYMPK
FOXA3
PPRC1
CRTC2
INVS
ERP44
WDR87
SIPA1L3
KBTBD6
RPIA
TTC13
ARV1
TMEM127
CIAO1
CCP110
PANK4
ZNF189
MRPL50
SNX27
GTPBP2
MAD2L1BP
CLEC16A
TRAPPC3
UBAC1
SNX17
EIF2B4
TSNAXIP1
RANBP10
CDCA3
SLC35B4
ATP5F1D
FASTKD1
MED15
TNFAIP1
IFT20
GFUS
STAU1
C1orf159
MRPL24
PPP1R12C
ZFYVE1
ATP5PO
PHF12
ZFYVE19
DNAJC17
TTC33
ING3
ZFYVE28
CFAP99
ZNF749
SCRIB
VCPIP1
C8orf44-SGK3
ING4
UNK
C16orf91
TSC2
NTHL1
NUDCD1
STK25
KBTBD7
GATB
FEM1A
TSSC4
ZC3H11A
NPRL2
CYB561D2
COX7C
AP2M1
TMEM59
TCEANC2
THRAP3
SMARCAL1
TRAK2
STRADB
BANP
SCAF1
TIMM21
FBXO15
ABCF2-H2BE1
ABCF2
ZNF444
PHF13
ZNF384
LRRC29
CLP1
UBQLN4
LAMTOR2
WNK1
MICOS13
HSD11B1L
PEMT
CCDC146
SLC4A2
CDK5
DESI2
RPL8
BOLA1
CTF1
HTRA2
SIRT2
NFKBIB
PRCC
ZNF56
NOP14
GRK4
NDUFS2
GTF2H4
TMEM11
NFXL1
UBR2
POLR2E
TBL3
FBXO46
ZNF420
ZNF169
STK17A
PEX26
UFSP2
ZSCAN22
WRNIP1
ZNF235
RAB1A
OSCAR
NDUFA3
DDX49
COPE
TFEB
LETM1
BUB1B
FBXW11
RALBP1
RPGRIP1L
FTO
AP2S1
GPANK1
CSNK2B
PSMD11
SEPTIN9
RBM6
JOSD2
CHCHD3
SMUG1
CCDC150
ZNF224
SSBP1
C19orf53
ZNF337
THYN1
ACAD8
UBE2Q1
DSTYK
SLC25A19
CNIH4
DFFA
ELOC
CAPN15
SEC61A1
DCAKD
NMT1
CLDND1
TMEM43
CHCHD4
DYNC1I2
SERPINI1
PDCD10
INTS9
HMBOX1
BICD2
LMNB2
UBL7
FDPS
USP48
TOR1AIP1
PSMD2
B3GALNT2
IGSF8
RAB5C
RANGAP1
TMEM69
GPBP1L1
ZNF32
PANK3
CNOT1
KMT2B
TFPT
PRPF31
SLMAP
ZNF230
TMEM102
PTDSS2
CCDC90B
AKIRIN2
PHF23
WDR53
FBXO45
ZNF554
ZNF354A
ZNF37A
SEC11C
RALGAPA2
IPPK
CFAP410
WDPCP
MDH1
MARS1
ARHGAP9
DDX47
LTA4H
RABAC1
PIGU
ZNF133
SSR2
ZW10
PA2G4
BUB3
CDK5RAP2
TIMM13
CTDP1
THOC6
HCFC1R1
USP31
WAPL
WBP2
AURKAIP1
FAM185A
SOX6
C11orf58
ZNF419
RPS6KB2
GPT2
PRR14
TBX6
NDUFB5
MRPL47
RIC8B
RPS20
CIAO2A
ZNF547
TRAPPC2B
GPKOW
C1orf109
FBXO48
APLF
PNPLA6
RPS26
INO80B
EIF2S2
SCAMP4
ADAT3
CCDC174
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ZNF350
FAM193A
UTP11
TXNDC9
EIF5B
EXOC4
RPS13
RAD51AP2
KAT7
PSMC4
ZNF277
DOCK4
VPS50
HEPACAM2
CNOT4
TMEM143
SYNGR4
MXI1
USP35
KCTD21
RPS7
NUP153
ZNF527
GID4
ATPAF2
FBXL19
COPS7B
PDE6D
ABCC5
TRABD
UCHL5
RO60
SYPL1
TRAF7
PSMD4
INTS1
ZNF586
SNRPE
LUC7L
ZNF451
RPL18A
PGBD4
EMC7
ACTR1A
SUFU
ZNF747
TMEM101
ZGPAT
ARFRP1
MGRN1
TRMT1L
SWT1
TTC1
DEDD
XPOT
ZNF862
ZNF484
CLPP
VAPA
GUSB
EXOSC4
MED27
TMEM245
MRPL20
ZNF2
CSRNP2
AHCTF1
HSPA13
METTL26
SPHK2
RPL18
PTBP1
MAX
ILF3
ZCCHC4
PHB2
ZCCHC8
VIPAS39
AHSA1
RBL1
SUPT4H1
NCLN
L3MBTL2
MED11
NFKBIL1
ATP6V1G2
QTRT2
CCDC191
ZNF773
BIRC5
SSR3
ZNF548
NCBP2AS2
NCBP2
KATNB1
TMEM186
PMM2
RPS3
LIN37
VPS4B
RAB30
SCAMP3
CRK
SCYL3
PPP6C
CNOT6
LEMD2
PRRG2
NOSIP
METTL3
GINS3
RPL12
LRSAM1
ZNF343
RETSAT
ELMOD3
NKIRAS1
RPL15
COPS8
SLC38A9
UBE2N
TMED9
ZNF599
ASXL1
ADSS2
SDCCAG8
CEP170
ENOX2
PRKCSH
CCDC151
ITPR1
ZNF226
ELP6
FAM149B1
ECD
POLR2J3
DNM1L
ZNF585A
MAF1
DCAF1
CFL1
POLRMT
CDK9
UBA1
COMMD9
RAB7A
DCP1A
AKAP8
ZNF567
PSMB4
KBTBD8
CAPN10
DGAT1
GFM1
CWC25
ZMAT5
UQCR10
CARS1
SF3B2
ZNF584
DNAJC28
CIAO3
ZNF45
OPA1
CXXC1
FAM222A
ZNF25
GGPS1
ARID4B
CDC25C
FAM53C
TOR2A
WASHC3
TPGS1
TMEM94
NOLC1
TSNAX
ZNF764
FBXO38
COPS7A
COG2
PCM1
SERP1
EIF2A
C12orf43
APH1A
UBA52
ZNF227
ABRAXAS2
RPS3A
HSP90B1
MTR
AQR
KHDC4
WASF1
CDC40
NCDN
KIAA0319L
BET1
CTNNBL1
MORF4L1
CDC34
ZNF17
MED23
SKP2
LMBRD2
IPO13
ACP6
PPP1R7
PASK
IFRD1
DPP9
ZNF416
PGAM1
DPM3
DOHH
CDK8
TSN
TERF2
CAND1
CEP350
UBE2V1
RAB8B
FAM228B
SF3B6
SUGP1
MAU2
MRPS16
SH2D6
TMEM33
ZNF628
ZBTB7A
EIF3C
EIF3CL
MEN1
SNAPIN
ACLY
PPP1R13L
POLR1G
RAB29
ZNF140
VEZT
FGD6
OAZ3
TRUB1
SKIV2L
NELFE
RWDD1
ZNF500
RPL22
RPP40
RBL2
CUEDC2
ALKBH8
EIF1B
EIF3D
NAPB
TOR1A
MRPL54
APBA3
MPI
PSMB6
HIRIP3
TMEM199
POLDIP2
RPL34
DUS3L
ZC3H10
ZNF805
NPL
SMN2
SMN1
CCDC124
HEXIM2
EDEM3
NUMA1
LRTOMT
BOD1L1
RPS19
ZNF304
SF3A3
CHCHD6
DARS2
CENPL
TMEM160
NUF2
B4GALT7
CLINT1
LRRC8A
KYAT1
SLC25A44
CD2BP2
CCAR2
PSMD3
PARK7
SLC37A3
NUDT13
RAB3C
ESCO2
PRPF4
CDC26
TOGARAM1
KLHL28
ZNF155
ZRANB3
R3HDM1
AP2B1
HSCB
CHEK2
TSACC
CCT3
ZSWIM9
LIG1
C15orf40
CCNL1
INTS4
IPO8
MAMSTR
CMPK1
STRN
THAP1
DPH2
SDF4
B3GALT6
RNASEH2C
BLOC1S5
BABAM1
TTLL11
RPL27
SERBP1
NOP53
PSMC3
YY1AP1
DAP3
RAB1B
LRPAP1
GPR137
MEA1
TOMM22
UCK1
BDP1
SUPT5H
SENP5
MITF
REXO1
ARPP19
ALG10B
IPO7
NUTF2
CENPT
ATP5MF-PTCD1
ATP5MF
SASS6
DAZAP1
RPP30
CANT1
ZNF436
RPL23A
PRKCI
RCAN1
SH2B1
TUFM
ZNF268
DMAC1
ZNF317
ABLIM2
PUS3
DDX25
RPS27
ZNF286A
ZNF550
ZNF691
ZNF180
FBXL18
NARS1
EMSY
CCDC117
XAB2
NICN1
KLHL24
GSK3A
MRPS25
ZNF211
C7orf25
XRRA1
SPCS2
RC3H2
TMEM222
SLC33A1
MYBL1
UBE4A
FBXO9
KNSTRN
ZNF513
DNAJB6
VRK1
WDR18
RTEL1
CDK19
AMD1
DENND1A
ZNF221
JTB
KPTN
PEX12
NUP205
TSNARE1
VKORC1
NCOA3
OSBPL11
COA3
CNTD1
SAP30
ZNF446
ARMH3
TPR
ODR4
MVB12A
MYL6B
YIPF2
TIMM29
ZNF165
GHITM
NME1
ZNF772
NFATC3
POLR2H
SART1
MARCHF5
CPEB3
KIAA0930
FCSK
TIMM22
SND1
ZNF668
ZNF646
WDTC1
RACGAP1
R3HCC1L
CWC22
NUP214
ZBTB45
USP15
SHLD1
ALG10
NMNAT1
LZIC
NAA38
CYB5D1
TMEM230
RNASEH2A
LRRC47
PAOX
FIS1
ZSCAN32
ZNF174
ZDHHC16
EXOSC1
ZNF417
ZNF324B
SHPK
CTNS
ZNF460
CACTIN
PRPSAP1
DHX30
NDUFB10
CDC6
SETDB1
DPM2
TMEM258
FEN1
FAM193B
RAD52
ELOB
SNIP1
TXNL4B
DHX38
REXO2
ZNFX1
TIMMDC1
TPRKB
NDUFS7
ARHGEF1
TMEM214
STX10
IER2
PRAF2
YWHAG
BRIX1
TMEM147
THAP4
SLC35E1
ATG4B
RPL29
LONP1
CATSPERD
MINDY1
PRUNE1
UBE2D1
DYNC2LI1
C16orf86
KDM4D
CWC15
RAB5IF
RPS21
UBE2J2
YJU2
SLC30A6
PSMD10
ATG4A
TTC31
CCDC142
RPL37
CBR4
SNAPC3
PCNP
TRMT2A
RANBP1
SMG5
POMZP3
ATG4C
WIZ
ETFDH
C4orf46
METTL18
C1orf112
KCTD5
PURB
TOE1
MUTYH
PSMA2
AP5S1
ZNF776
MRTO4
EMC1
ZNF565
ZNF146
BRD3
CMTR1
KRBA1
GMPPA
C8orf76
RDH14
ITSN1
CRYZL1
NDUFAF5
ESF1
TMEM150A
EXO1
ORC4
MBD5
NR6A1
TMEM129
TACC3
HDGF
TOR1AIP2
MAP3K13
CAMLG
CCDC77
TAF8
DNAJC14
PPME1
C2CD3
ATE1
PUM3
STMN1
ASH1L
ABT1
TIMM23B
PARG
MTMR9
MFSD13A
GFM2
M6PR
KLRG1
SMIM13
PPP1R11
PDE4DIP
FAM207A
ZNF684
HBP1
ERI3
SSNA1
ANAPC2
VPS45
NUP107
CDCA8
SLC35E2A
SFXN5
AKT1S1
TBC1D17
AHCY
RPS28
NDUFA7
TIMM23
SETMAR
ANGEL2
ZMAT2
RBM28
CHCHD5
HSPH1
CIZ1
DNM1
SAMM50
SNRPB2
ZNF79
PAK2
ADPGK
ZNF213
MIA3
TLE4
MCMBP
FOXJ3
SPECC1
CLPTM1L
NDUFS3
KBTBD4
TUT1
ZNF302
SSU72
SEC13
TRAPPC10
PRPF6
MCM10
TMCO1
LCORL
DIAPH1
TTC30B
KAT8
DTX2
RNMT
FAM210A
SESN1
CEP57L1
WASHC4
TMEM248
DOT1L
BIVM
POGLUT2
ZNF551
ZNF184
SERTAD3
TDP2
ACOT13
PES1
PTCD1
CPSF4
ADAT1
WRAP53
TP53
KIF15
KIAA1143
NOP16
HIGD2A
GPR108
GRWD1
MRPS33
PDIA5
LRWD1
ALKBH4
LRGUK
PCBP2
CBX1
FAM32A
PPIL2
SEL1L
GTF2I
NDUFAB1
GAPVD1
CYCS
ACBD5
UBXN4
ZNF721
PIGG
SLC39A13
NELFB
U2AF1L5
U2AF1
RNF126
NR1H2
PTRHD1
CENPO
METTL17
IQGAP3
CEP97
NFATC2IP
DAXX
ATP13A1
C8orf33
MRPL19
USF1
LSG1
TRMT10A
MTTP
RPLP2
PGM2L1
PEF1
POLR1B
SP4
UBL5
TMEM217
TBC1D22B
MRPL30
MITD1
UBXN6
PPP2R5B
NR1H3
ACP2
MBD1
ZNF605
STK40
TTC37
ARSK
SECISBP2