ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ CDK9: STRING

DCAF12
RLF
CCAR2
ZNF684
IPPK
EXO5
ZMPSTE24
CD33
CAP1
ZFP69B
SCNM1
LYSMD1
GRPEL2
MTMR9
LAMP1
ALOX5AP
SH3BP2
CAB39
ITGB2
RPS19
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDFY3
LGALS8
NFYC
NLRP12
ITGAM
RXRA
NCF2
NCF1
STEAP4
PNP
PGA3
WDR74
SNRNP200
FAF1
PGK1
VTA1
NMBR
SPATC1
ZFP69
PPT1
TSSC4
HAUS6
HBS1L
CD244
ABT1
MTF2
ARHGAP30
EXOSC3
SETDB1
PGA5
MRPS18C
HELQ
TRIT1
SP110
IPCEF1
RMND1
ARMT1
FCER1G
RASA1
NUTM1
NOP10
PGA4
MRPL24
TMEM154
ARPC3
PPIH
SNAPC3
CCDC200
IL16
RMDN1
PDLIM2
SASS6
ZNF408
ARHGAP1
IFRD2
NUF2
RNF149
NDFIP2
MTPN
LUZP6
POMP
UBR7
GON7
RNPEP
MFSD2A
VCPIP1
C8orf44-SGK3
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
CMTR1
HIBCH
FAM207A
MIA3
ARPC2
TLE4
SMAP2
NIP7
COG8
SRSF11
LRRC40
SLC25A32
DCAF13
DISC1
ATP5MPL
RPL37
FOXJ3
HEATR1
ZNF410
MMACHC
CBWD5
CBWD3
FEM1A
TIGD4
ARFIP1
VPS33B
PPP1R12C
RWDD1
TRIM35
PTK2B
CEACAM21
UBAP2L
C1orf43
ATG5
EIF2D
STK4
UBAP1
EIF3D
URM1
YES1
TFB2M
CNST
CUL7
EPRS1
KHDRBS1
SELENOH
MEFV
ZNF484
NIBAN3
INTS9
HMBOX1
DCP1A
CHMP4B
RUBCNL
OAS3
MRPS31
UBXN8
TTC14
TNFAIP8L2-SCNM1
TNFAIP8L2
TMEM59
TCEANC2
RTF2
MOB4
TMEM30A
USF1
UCHL5
RO60
DOCK8
TNFAIP1
IFT20
HMGB1
USPL1
TIPRL
TMEM127
CIAO1
TOMM20
WDR55
DGAT1
WDR70
TGFBR2
TIMM21
FBXO15
MDM4
PEX12
MED18
PISD
ZNF197
GTF2H2
DCAF10
LST1
TPRKB
EXOSC4
XRCC5
SIGLECL1
FPR1
ATP6V1C1
TTC13
ARV1
SIGLEC11
RPL8
HARS2
HARS1
INPP4B
WDPCP
MDH1
MTRNR2L8
STK36
RNF25
KIFAP3
UTP3
ZNF696
CLIC5
MYBL1
NOTCH2
NECAP2
IFNGR1
KBTBD6
ARHGEF1
CD1A
C4orf3
RGL1
ARPC5
OSCAR
NDUFA3
SCAF11
TBL3
C6orf89
NOXA1
CCL2
NFKBIL1
ATP6V1G2
RTCA
SLC33A1
ADPRS
PRPF3
TLE6
PDCD2
CTSG
CCT8
VPS25
RCHY1
UBLCP1
FCAMR
NDUFS3
KBTBD4
EIF2B3
TCF12
P3H1
AOPEP
MTRNR2L2
SNX19
NOL11
DR1
RNF141
MRPS23
ASXL2
ZNF622
RRS1
FKBP1A
PKD2L2
ATG16L1
PIGM
NSUN5
AKR1A1
WNT2B
RAC2
FUCA1
PPP1R12B
PEX3
ADAT2
CBWD6
CBWD1
HAX1
ZFYVE1
SDHAF3
N4BP2L2
SCAF1
ACAD9
OTUD7B
PSMD7
SDCCAG8
CEP170
APPL2
TADA1
SF3B1
CHCHD5
ARHGEF12
GOLGA7
B3GALNT2
TRIP4
E2F4
TPK1
GOLGA5
SLC35B4
AGGF1
WDR61
TMEM186
PMM2
GOSR1
DENND4B
TCTEX1D1
PIGU
PIKFYVE
STAU1
FAM120B
SLC24A1
TAF11
PDPR
CSF2RB
C1orf74
LRRC46
PHACTR4
TATDN1
NDUFB9
RALB
FBXO46
CCNL1
CEP350
UCK1
THAP12
GVQW3
ZNF780A
SNX3
GSPT1
ZNF56
ZNF142
BCS1L
ACVRL1
ZNF337
OPA1
IBA57
PIGBOS1
PIGB
PA2G4
TERF2
IPO8
GALK2
COPS2
NFX1
THOC3
PRKAB1
SNRPC
XRN2
TOR4A
NME7
BLZF1
NOB1
TLE1
LOC100289561
ZNF331
FAM227B
DTWD1
TBPL1
RPS6KA1
FITM2
STARD6
C18orf54
THOC5
ARHGAP25
RPL27
CLPP
PACC1
TAF12
SLC22A16
GTPBP10
KBTBD7
MTMR14
SRSF4
BRIX1
ITGAL
DUSP6
PHB
DESI2
UBL7
RAD50
GPR68
ATP5PO
DNAJC16
MAN1B1
PICALM
S100A2
MRPL17
WIPF2
HDDC2
YKT6
RPL37A
HK3
SYMPK
FOXA3
HSPA13
KATNBL1
GET4
CFAP298-TCP10L
CFAP298
IRAK1BP1
LILRA2
JOSD2
PGBD4
EMC7
NOL6
TPM3
RANBP3
INTS1
UBR1
ELOF1
C22orf34
CIAO3
CITED4
AP2B1
ZNF668
ZNF646
DYNC2H1
TSN
TOR1AIP1
CCDC149
CRTC2
DBI
C2orf76
PDF
NAPG
PPCDC
NLRP3
MED10
CXXC1
LAMTOR5
TPT1
TAF13
RAB1A
RRM1
HUS1
NUP58
CCDC30
ZMYND12
PPCS
AHCTF1
GLI4
SLC31A1
FKBP15
SSNA1
ANAPC2
TRIM41
TLN1
CREB3
WDFY2
NCSTN
COPA
MRFAP1
SPG11
IL7R
ORMDL3
LYPLAL1
APH1A
TOMM6
GUK1
OAS2
COPB1
ZNF697
OCSTAMP
CALR3
C19orf44
VPS26C
TMEM39A
NR3C1
ANXA2R
NUP133
BOLA1
SF3A3
RPS16
RGPD2
RGPD1
SLC37A4
TBC1D23
PUM1
GOPC
ADAM10
ADSS2
KCTD5
SF3B5
CCDC114
MDN1
RNF14
ACP3
CCL22
TMX1
MEF2C
GTF2B
RPIA
ZW10
BOD1L1
GTF2H2C_2
GTF2H2C
SIGLEC6
CEACAM4
ZCWPW2
AZI2
ERMARD
ATG7
MTFR1
PPME1
C2CD3
ZNF614
RPL5
MRPS35
MLKL
VCPKMT
PARVB
RPL29
PPP2CB
IL1RN
SNX17
EIF2B4
OBI1
BOD1
TRAPPC4
RPS25
ADAM17
DNAJC10
CNOT1
NUP155
SEC14L1
TRMT11
CTU1
MRPL55
RSL24D1
MTMR6
LAPTM5
PUM3
SART1
SH2B1
TUFM
CUTA
GNPAT
C1orf131
SLC1A5
SNAPC5
ETNK1
DNAH14
GIMAP8
MED23
SKP2
LMBRD2
COPS8
XRRA1
SPCS2
SRP9
CHMP7
USP3
FIGNL2
CSNK1A1
CLEC16A
CTDP1
SRPRA
CATSPERE
RPL36
CTNNB1
NUDCD1
ZNF350
RPL22
SNAP47
JMJD4
MED4
GZF1
ABCA3
CCDC146
ZNF221
KIF15
KIAA1143
DHDDS
OCIAD1
CHMP5
BAG1
RAB44
ZC3H6
ZNF175
RPS20
LTN1
UBE2V1
TNNI2
USP15
DCPS
IL6R
MRPL44
RPL11
ARID2
TRIM37
EMC8
COX4I1
CCL4L2
NKIRAS1
RPL15
RC3H2
DDX41
EEF1AKNMT
TRIP11
EIF6
RIC8B
MEN1
HIGD2B
BBS4
RNF216
GTF2E2
PNPLA6
GGPS1
ARID4B
VIRMA
LRRC29
NDUFC1
NAA15
KIAA1586
ZNF318
SYK
ZNF12
TRIAP1
CTTN
PTK6
EFHC1
ABCD3
PRRG2
NOSIP
PCBP2
CD53
LTA4H
IPO13
CRBN
ORC5
AHI1
S100A9
EDEM3
PPP1R11
SLC44A1
LATS1
YWHAB
INPP5D
ZNF397
PSMA6
CGAS
LILRB4
ZNF567
RPL38
UTP23
ZNF354B
NBR1
CTR9
TLR4
TRIM25
TESK1
LYNX1-SLURP2
LYNX1
FRG1
MAGEF1
NCKAP1L
PPP6C
LONP2
ABCC11
KIF2C
ATP2B4
POLN
HAUS3
THRAP3
NDUFS2
ZNF230
INTS12
GSTCD
SEC13
BRF2
GHRL
MCOLN1
EED
SMIM26
TOMM7
YTHDF1
CNPY3
APOL2
DAB2
FAM185A
ZNF354C
MRPL49
FAU
NSMCE3
WDR36
ST7L
CAPZA1
AGT
GTPBP2
MAD2L1BP
ERI1
TAF1B
NDUFAF6
SGO2
NCF4
SSBP1
DUS3L
NCBP2AS2
NCBP2
VKORC1
LIN54
SPRTN
EXOC8
TCHP
POM121
IFITM2
DDX23
RPS7
SKIV2L
NELFE
ZNF549
COX7A2
SAMD4B
ZC3HAV1
ABCB10
RNF139
AP3B1
AVIL
GBA
ZNF212
SNU13
PTTG1IP
LILRA1
ZNF225
CNIH4
ERLIN2
SRBD1
DNTTIP2
KATNA1
BHLHE40
OAS1
RRP15
GABPA
ATP5PF
TRIM46
KRTCAP2
MRPL45
SLA
FAM200B
ICAM1
PSMB1
TBP
UFL1
KLHL20
PKN2
FBXO28
ZNF658
TRMT61B
GNAI3
DHX15
TNFSF10
TPR
ODR4
MAK16
HMGCL
SHPRH
SLC30A7
TMTC3
CEP290
ZNF189
MRPL50
CDK19
AMD1
MRPL16
DAXX
MTERF1
CDC42
PROS1
NAPB
CEP63
ANAPC13
NPRL3
DEDD
PPIP5K2
RPL6
LTO1
TRAF3IP3
OSBPL7
TCTEX1D2
TMED4
TM6SF1
ZC3H11A
UBE2Q1
ALG10B
TOMM22
ZNF721
PIGG
NDUFAB1
SUCO
FAM32A
LYPLA2
EXOSC6
PPIL4
PSMD9
HPD
TNPO1
STAT2
TMEM222
GON4L
PPP1R8
UNC50
COA5
MED20
BYSL
CHEK1
TEP1
ALG10
NDUFV1
WFDC3
DNTTIP1
ITGB1BP1
CPSF3
WDFY1
MICOS13
HSD11B1L
WDR7
POLR3E
WASHC5
NSMCE2
HNRNPU
MED15
SPHK2
RPL18
DDX18
TMEM248
MRPS10
TIGD1
EIF4E2
PIGC
DHX34
MINDY2
UQCRC1
CCDC150
RAB3C
KIZ
SNRPD3
GUCD1
MINDY3
HINT1
ZNF398
ZNF425
NUDT9
KIF22
NBPF1
PPP2CA
GIT2
MIDEAS
BCL2A1
ZNF134
FBXW2
ASB6
ISY1-RAB43
ISY1
FCHO2
SIGLEC14
TTC33
CTNNBL1
CCPG1
C15orf65
MFN2
ORC4
MBD5
DCAF8
BRMS1
SESN1
ZNF224
TOR1A
CEP57L1
TBRG4
LUC7L2
SLC7A6OS
PRMT7
FMC1-LUC7L2
FMC1
SDHAF2
CPSF7
NBN
SMIM15
IKBIP
APAF1
PRCC
RBM6
PRKCSH
CCDC151
KDM1A
RBM15B
POLI
PEX6
SKAP2
QTRT2
CCDC191
EIF2S2
FBXO38
TAB1
ATP9B
SDHB
EIF1
CDK4
MAPKAP1
NIPBL
DCLRE1B
AP4B1
PARP10
LSM2
ABCF2-H2BE1
ABCF2
ZNF226
TATDN3
NSL1
ANGEL1
IPP
IMPA1
WDR53
FBXO45
ATP5MF-PTCD1
ATP5MF
TMED5
CCDC18
U2AF1L5
U2AF1
ATP6V0B
EIF4ENIF1
PKD1
PPP1R12A
GTF2H3
EIF2B1
SEC31A
NUP42
RBM34
PSMC1
IFTAP
SRSF5
PHF1
AP2S1
MARS1
ARHGAP9
METTL18
C1orf112
SDE2
LARS2
TKFC
DDB1
CCDC15
SNUPN
TRAPPC8
NXF1
OTUD6B
TCTN1
TMEM43
CHCHD4
ETFDH
C4orf46
DMAP1
TIGD6
HMGXB3
ATP5MC2
MIER1
DNAI4
CKS2
TNFRSF10A
RBBP5
CFL1
ALKBH3
USE1
BAX
NOC4L
DDX51
RAB18
TRMT6
MCM8
RBM45
S100A13
CHTOP
SCML1
VPS13C
VRK2
BATF2
TRMT2A
RANBP1
ZNF268
ERO1B
ZNF669
ATXN7L1
RAB10
PHF13
ZNF148
CRB1
MKS1
RPAP3
VGLL4
SLFN13
TEFM
ADSL
REPS1
RABIF
PGM2
PCM1
MED27
DHX8
TOP3B
PPP1R15B
TMEM68
TGS1
MAP2K7
TMUB2
KIFC1
POLR1E
IFI6
STPG2