ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023330 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◣ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

SPATC1L
FBH1
ANKRD16
HIBADH
SP2
PKNOX1
ACAP2
SESN1
RFX1
RAB5B
KDM4B
DNM2
MAF1
NLK
ZNF595
ZNF718
ZSWIM3
ACOT8
G3BP1
FLAD1
CYTH2
KAT6B
ZNF687
SP1
TMEM60
PHTF2
FRMD5
MRTFA
ANKHD1-EIF4EBP3
ANKHD1
LYNX1-SLURP2
LYNX1
PLAG1
CHCHD7
STT3A
CBX5
HNRNPA1
UBE2J2
JUP
ATP5F1B
ACTR1A
TRAF2
HIP1
RBM27
ZNF141
CGGBP1
AK2
ZNF654
CIC
RHPN1
GATAD2A
OSBP
EVI5L
SLC25A25
NAIF1
PANK2
OSBPL2
H2AZ2
LRCH4
FBXO24
DCTN4
OGDH
ZMYM5
NFATC2IP
NFE2L1
RAB40C
PPIA
HTT
EIF4A1
ABHD2
TUBB4B
AKTIP
FKBP5
PWWP2A
HSPA2
ANKZF1
TMEM45A
KHSRP
RAB11B
ETV5
RPLP0
PABPN1
MSANTD4
NCOA2
BCL2L1
CTTNBP2NL
ENSA
SAP30L
STK17A
ELMO2
PXMP4
MAP3K3
CHD6
HBP1
C7orf50
STIP1
GDI2
MED30
ZNF564
TOM1L2
DRC3
CEP131
PRRC2B
SLC26A2
GATAD2B
TMEM160
TDRKH
PRC1
FAM126A
TCERG1
XPO1
WFS1
TARS2
MPZL1
EPHA7
NUMB
MEAK7
SFXN5
CENPA
FRYL
MYH10
RNF34
PODNL1
DCAF15
HLTF
FANCF
TMEM218
IER5L
HNRNPC
SCAI
TNIP1
MLLT1
RRBP1
ZMYM2
MTMR12
FMNL3
TOP2A
CCDC200
RPL36AL
MGAT2
TXNDC16
CYB5A
TRAFD1
SPRYD3
KIF1B
EIF2AK3
RAB3A
ZNF492
DNAJC14
ZSWIM1
MACROD2
YPEL2
UGP2
ZNF695
TEPSIN
NDUFAF8
GTPBP1
PHF20
ERCC2
RAB5C
SIPA1L2
DCUN1D4
TP53BP1
HNRNPL
MEF2D
IGSF8
ZSWIM4
PLCL1
PNN
SFXN3
PDZD7
TCF3
TRIM35
PTK2B
TRIM9
IP6K1
TRIM32
ASTN2
CCDC61
PRDM11
PCF11
CANX
KMT5C
BCAS3
IRS2
EPHB3
EHBP1
ORC2
ERI3
DNAJB5
JPT1
RBM39
ENPP5
FOXK2
OXLD1
CCDC137
PGAP2
CNNM2
RPN2
MROH8
MYH9
TAF7
MXD4
KCTD7
TBC1D10B
MYLPF
HGH1
EFNB2
SLC25A42
CBLB
ATF7-NPFF
ATF7
CRLF3
DAZAP2
SYPL1
SEPHS2
KIAA0232
CEBPG
FKBP14
SEPTIN9
TLE1
ACTR2
UBP1
RAB40B
ZNF691
ZSCAN32
ZNF174
OTULINL
PMS1
ORMDL1
ARAF
CDR2
KLF5
NR3C2
ZNF281
TSACC
CCT3
ARL4A
POLR3A
EEA1
MAML1
RPUSD3
GLRX5
OSBPL3
KIAA0513
ZRANB3
R3HDM1
HDGFL2
ALKBH5
GLCCI1
GOLIM4
HESX1
APPL1
PBX1
PLIN3
MRPL37
CYB5RL
HNRNPR
PODXL2
SLC41A1
FAM222B
KMT5A
DIAPH3
SP4
PPP2R5A
SPSB3
NUBP2
MAST4
MPHOSPH8
IVD
MEGF9
ASPH
SMAD2
C12orf65
FAM72C
FAM72D
PDXP
ENO1
CAMTA1
BAIAP2
GNAZ
AGPAT1
RNF5
KCTD9
CDCA2
MYH14
UVRAG
KANSL1
PPFIBP1
BPGM
AKAP8
CDH15
SLC46A3
ENTPD7
MIEF2
TSPAN15
ZCCHC14
NR2C2
MPRIP
PPM1K
PAOX
JAKMIP1
TOP2B
ZNF555
FZD4
MACO1
RPUSD1
CHTF18
NXT1
TTBK2
RAPGEF2
GBF1
NCK1
VIPR1
TPCN1
IQCD
GET4
ZC3H6
LLGL1
RAB39A
RMI1
HNRNPK
TMCC2
TRAPPC11
RWDD4
NIPAL3
STPG1
RUVBL1
NUFIP2
GATM
RPS11
SPATA5L1
SP3
HOOK1
RSBN1L
PRMT1
MAFA
ERAP1
TRAF7
HRAS
PCNX3
FOXO1
PEF1
ZFYVE21
XRCC3
HACL1
BTD
RAB8A
EIF5
OTX1
ROGDI
NUBP1
SSBP2
IVNS1ABP
JPT2
RTRAF
HNRNPAB
NXPE3
DDX19B
AARS1
WBP1L
MLH1
EPM2AIP1
ZBTB7A
FOXN3
WBP1
SHKBP1
PAX9
GRK6
INTS3
GPR108
PC
BBX
LIX1L
HDAC4
GOLPH3L
HEY1
CCNG1
ME2
FAM72A
PIM1
NAXD
PLEKHH2
MDC1
ANKRD54
SARNP
ORMDL2
KDM6A
ARRDC3
N6AMT1
ORAI3
ANP32A
PDPK1
CIT
STARD3NL
PPP3CA
SLC25A19
ANP32E
HSPA5
SPAG7
PPM1B
ADRM1
RGS9BP
ANKRD27
MARCHF3
ZNF774
GRSF1
C16orf72
YWHAZ
OPA3
COPS7B
PDE6D
KSR2
FYN
SMARCD2
CFAP410
TIAM1
LOC150051
KBTBD3
AASDHPPT
INIP
USP20
C9orf78
STX5
ZNF626
OTUD5
CASKIN2
TSEN54
COQ7
CREB3L2
KAT7
SRP19
DNAJC27
ZNF200
CHCHD2
ZNF724
CREBRF
PSKH1
SDC2
TDP1
EFCAB11
TANGO2
ARVCF
ALKBH7
IL6ST
ACTN1
GNA12
ZNF443
PSMB3
AP2A1
SLC39A1
PADI2
MIA3
IGSF9B
CCDC153
LMAN2
PRKD2
GPR158
SUFU
IRX2
C5orf38
LMTK2
DAPK3
FMN1
AKAP5
ATP7B
ALG11
PTPN13
ACYP1
ESR2
ZNF563
TOMM40L
GAS2L3
CCNL2
MTOR
C22orf39
SBDS
TYW1
SLC25A28
CNOT3
TOM1
RGMB
BAZ1B
NF2
PDP2
F11R
PROSER3
HSPB6
UBTD1
MMS19
TNRC18
SELENOO
AKAP13
GALNT18
FHIT
GLCE
FAM111B
ZDHHC24
ACTN3
ACTR1B
CREB3L4
GRPEL1
LINC02210-CRHR1
OXSR1
TNRC6B
MAPK9
PLCG1
TMEM53
ARMH1
ZNF211
ING1
VPS35
AZIN1
RALGPS1
NBR1
ATP5F1E
PGK1
PNKD
AAMP
DPP3
EIF4A2
TMTC4
XAB2
RNF20
DYNLRB1
KCNAB2
ZNF367
UBFD1
EARS2
MBIP
RSPH4A
PDIA6
PBX3
SRGAP1
MAPK8IP3
ABCA7
CCDC102A
ATP6AP1
SORT1
LIN37
ZNF493
YJU2
RFX2
ITSN1
CRYZL1
SPC24
COPG2
CAND1
STAT3
DRAP1
C11orf68
ARL17B
ARL17A
PRKACA
PER2
DHCR7
LCORL
SLC39A3
HMGN1
DUSP10
GFPT1
RBM4
RTTN
ZNF519
SLF2
FAM228B
PFN4
PCYOX1L
FGFR3
LTN1
BBS10
FKBP3
RBM15
CHD8
FICD
PACSIN2
MRPL34
ABHD8
DDX11
MTRNR2L8
INPP5B
ZBTB18
SCAMP2
POLD2
PCP4L1
CYC1
SUN2
DPY19L3
OTUB2
DMBX1
LETM2
CREB3L3
SMARCA2
ZNRF2
GNA11
CDC25C
FAM53C
CHPF2
BBS12
AP5Z1
NFIL3
HNRNPLL
BAHCC1
ZBTB25
PPP6R3
ZBTB1
KMT5B
ANAPC15
DNAL4
FKBP8
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NEMP1
MED7
SUZ12
ZNF77
USP16
PGD
KLHL25
BUB3
NGDN
MAF
ZBTB20
GLIS1
HDAC11
ZNF823
AMER1
SLC15A4
MAFB
FAM174C
TRIM45
COPZ1
TBC1D10A
SWSAP1
ID2
PTDSS1
MTERF3
RRAGC
STARD5
NOVA1
KMT2A
ZNF341
RPL18A
PRKCI
ZNF143
DGCR8
MCM3
TEN1
ACOX1
ZNF775
RAB22A
YIF1A
HERC3
IL10RA
LAMTOR4
ZNF441
HS3ST3B1
ZNF418
CNTN1
MCU
STX7
H2AJ
MCM7
AP4M1
MEX3C
SIX2
TMEM161A
JARID2
ZNF91
HEXIM2
BAMBI
MAGI1
MEA1
WDR81
SSBP3
RNF187
SNX18
SMDT1
GALNT2
TMEM41A
MON1B
EIF1
ZNF44
UBE2C
ZBED5
PER3
MARCHF2
DLGAP5
STK11
ZNF440
MTHFD1
SAMD4B
KDM4A
ATP6AP2
ZNF436
INAFM2
SLFN5
FUT8
FAM76B
CEP57
FOXK1
PRADC1
CCT7
IBA57
DDX49
COPE
INPP5A
C19orf48
ELAVL1
MAD1L1
CCDC91
PRPF40A
ARL6IP6
CTPS1
GBA
TPRG1L
STARD7
DGLUCY
RPS6KA5
ZNF14
ZNF776
PCYT1A
KIAA0895L
ZNF727
ZNF98
SFPQ
HNRNPA0
KANSL2
ZNF726
MAN1A1
ARHGEF9
HAUS7
ULK3
USP15
TLE6
PAFAH1B2
TYW1B
HEATR5A
SNX25
BNIP3L
GALNT10
CNTRL
TSPAN31
KANK3
NUF2
NRXN2
CBX8
RHOB
EIF2B3
LMO4
LRP10
OPA1
USF3
ZNF92
NSMCE1
ATP5PD
ITGB1BP1
CPSF3
INTS10
RFWD3
ISOC2
MROH1
CAPSL
YBX1
ETFBKMT
FAM117A
INTS4
ZIC3
GLRA3
ZNF66
PRDM9
LANCL2
GNAL
HINFP
TTLL5
ERG28
SPDYE14
SPDYE10P
CASTOR2
BCDIN3D
GTF2A2
EPB41
ECHDC3
PEX2
YARS1
S100PBP
USP3
LSM4
MAP2K3
PJA2
NBPF1
RFX3
VEZT
FGD6
LUC7L2
CDC73
ZNF17
DDX59
RCOR1
BICRA
ARHGAP39
SHPK
CTNS
PMF1-BGLAP
PMF1
PSMD3
TCP1
MRPL18
KDSR
ZNF101
GNL3L
ZER1
ANKRD18B
ERV3-1-ZNF117
ERV3-1
MZF1
RNF139
CDCA7L
SNX15
E4F1
CERS6
CHD2
SPRYD7
TMEM170A
ZNF799
MTFR1
LAPTM4A
KAT6A
CDON
RUVBL2
GYS1
BRPF3
SLC35E2A
SUOX
ZNF491
TCTEX1D2
MTRES1
PLAAT1
FAM227B
DTWD1
RNF13
PAF1
MED29
TMEM9
WBP11
C12orf60
UPRT
NKX3-2
DROSHA
C5orf22
MED13L
PPM1L
CEP152
TM2D2
ADAM9
HSP90AB1
TWF1
DNAJB1
TECR
SAV1
SELENOI
ADGRF3
GUK1
NUDT4B
NUDT4
NDUFA12
LRCH3
FAM222A
NCBP2AS2
NCBP2
GLS
UAP1
RIPK2
MRPS23
FRA10AC1
SLC39A13
EPHA4
ZBTB3
UGCG
ZNF732
TOR1AIP1
ERCC1
ZNF709
PSMD9
HPD
ANO10
COPS3
RBMX
SIN3A
CIZ1
IQCH
AAGAB
NOP56
ASF1B
ONECUT2
DERL1
FAM76A
EIF2D
TIMM23
ZDHHC5
GMNC
PKNOX2
FAM156A
CHD1L
PRKAB2
SETD1A
GFM1
L2HGDH
DMAC2L
VAT1L
RPL37
ZNF700
CSTF2T
HECTD1
PEX5L
DTX4
ARHGEF10
NEBL
DSTYK
SLC33A1
ARL14EP
BRMS1L
FUT10
RBX1
UCHL5
RO60
PAK2
HYAL2
SURF4
FAM72B
BMS1
NBN
DVL3
RNF6
CDK16
LMBR1L
ZDHHC13
PAG1
NMT2
GSPT1
CTNNB1
NDST2
MBOAT2
COL5A1
DLL4
DPY19L4
RAB5IF
IQCG
INCENP
RTN4
LMLN
ZNF639
MIA2
USP30
GNB4
PIGX
CEP19
SKA2
PRR11
CHAF1A
DNAH14
DCUN1D1
RBBP5
KRR1
WWOX
LIG4
ABHD13
AFF1
PSMA7
MIGA2
WDR53
FBXO45
CBWD5
CBWD3
CBWD6
ATP2B1
S100A16
TBX3
TACO1
POR
IDI1
HMGCS1
ZNF669
SCYL2
DEPDC4
ZNF844
TSPAN4
POLR2L
AP3M2
DUSP23
SSH1
TMEM30B
ABCB8
UPF2
CHEK1
CAPS2
JAG2
MED23
VKORC1