ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501657 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◣ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
GSTA4
H4C14
H4C15
GBA
NUF2
FRA10AC1
DSTYK
MTRNR2L8
SF3A3
MRPL21
IGHMBP2
RBBP5
STX16
INTS5
POLDIP3
EIF2D
C12orf57
SNAP47
JMJD4
SELENOH
NR1H3
ACP2
H2BC21
H2AC20
H2AC21
S100A2
INTS12
GSTCD
FAM227B
DTWD1
SAR1B
DRG2
SSBP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
S100A16
TARS2
H4C8
NDUFC2-KCTD14
NDUFC2
TATDN3
NSL1
HMGB1
USPL1
SMG8
NDUFS3
KBTBD4
TRIP4
ZBTB45
NMNAT1
LZIC
DCP1A
MTRNR2L2
CCNL1
RPL37
RPS7
SLC44A1
RAD54L2
H4C11
EIF1AD
BANF1
GARS1
NPAS4
YARS1
S100PBP
H1-3
CCDC88A
NME1
MRPS18C
HELQ
TBC1D19
ZNFX1
DPY19L4
LRRC37A3
PSMF1
MRPS23
H2AC19
H2AC18
C17orf75
SIRT4
DMAP1
LAMP1
H1-4
MTERF4
CUL4A
PCID2
STAT3
CCDC107
METTL9
RUVBL1
NOC4L
DDX51
H4C12
UQCC1
GTF2H2C_2
GTF2H2C
SEC13
MRPL40
HIRA
ERCC6L2
SCNM1
LYSMD1
AAR2
KLHL20
MGAT5B
ETV4
RPS6
JRK
H1-2
POLR3E
MTF2
H3C3
PRRG2
NOSIP
RGPD2
RGPD1
STOML2
TAF1D
C11orf54
PDE4DIP
AURKAIP1
KMT2C
TUBGCP3
CT45A10
MPHOSPH10
MCEE
SRSF4
SMARCD2
WDR24
CDKN2AIPNL
PSMD9
HPD
PPIP5K2
ARL8B
TSFM
LRRC59
MAT2A
DDIT4
H2BC11
H2AC11
NFE2L2
SYT7
STX18
DUS1L
CLUH
H3C15
H3C14
H2BC18
H3C13
VPS28
TVP23B
NUP54
WDR31
C12orf65
MRPL1
TTC4
PSMD6
TBL3
G6PC3
GEMIN7
TTLL11
DNAJC25-GNG10
DNAJC25
JUNB
BNIP1
TSC2
NTHL1
ADPRHL1
DDX19A
RPLP1
STAG1
MLEC
POLG
REXO4
RANBP2
RPL41
GTF2H2
DDX1
LDAH
ALG10B
LAMTOR5
TMED2
NUP153
COMMD2
SRSF7
AQR
FAM98B
SDHAF3
TEFM
ATP5MC2
SPRYD4
PMPCA
ENTR1
NR1H2
MRPS31
H3-2
ST3GAL2
SNRPE
COMMD1
CCT4
CLCN7
MRPL34
MORF4L1
USP30
DCAF10
DHRS3
RPS20
SCAND1
INO80B
RPS19
GFM2
FZD1
PHLDA1
PPRC1
GINS3
RPL27
ADPRS
GTF3C3
FAM133B
NSUN4
BANP
SNRPB
KNL1
MRPL20
RAB5IF
KCNMA1
RCAN1
SNRNP70
CZIB
ZNF749
RPL12
LRSAM1
TIMM22
TACO1
NFX1
ID1
PYROXD2
PHF12
RPL29
MCOLN1
ZNF398
ZNF425
NOL11
ATXN2L
ADAR
MAPKBP1
MRPS2
C9orf116
COQ8B
KDM1A
TMEM101
PRPF4
CDC26
TTI2
VPS72
CBX5
HNRNPA1
VIRMA
H4C9
ACYP2
TOR1A
BRF2
WDR36
BAX
MAZ
C8orf37
CCAR2
RPL26L1
MRPL58
TOB2
ILF2
OMA1
DAB1
VPS36
GPRC5A
PAFAH2
HEXIM2
RPTOR
ZNF3
H3C2
H3C1
H4C1
UCHL5
RO60
KCTD5
RRP15
RPS15A
DNAJC2
MAPK1IP1L
C12orf73
MRPS14
TRMT61B
ERCC1
SFPQ
TRPM7
RPS3A
TMEM222
H4C3
RIN1
UBL7
SLC33A1
PHB2
POLR2J
TOMM7
EMC4
OTUD7B
DNAJB4
FAM207A
C8orf33
COX16
DHX35
ZNF609
MTIF2
MRPS35
PPP4R2
YIPF2
TIMM29
BMS1
EIF3G
MRPL55
ARL6IP1
MYL5
ATP5ME
CIAO3
ZC3H6
MED18
ZER1
INO80C
TMA16
PNPT1
MED4
ADNP
ESCO1
HSPA6
METTL25
CCDC59
PURB
EFTUD2
CCDC103
CCNT1
RBM39
CPSF1
CCDC15
CLUAP1
FCHSD2
SLX1B
SLX1A
BOLA2B
BOLA2
ILF3
LMNA
TBC1D13
ITGB3BP
EFCAB7
CSKMT
C11orf98
MAF1
CTNNB1
AARS2
LIG4
ABHD13
PPP1R14B
GATD3B
GATD3A
IDH3B
FBXO28
CIAO2B
CES2
GPN1
CCDC121
PRDX1
TMEM39B
FAM228B
SF3B6
UBA52
CD2BP2
CDK5RAP1
DUS2
DDX28
SLC9A1
FAF2
TRAF7
NDUFS7
TSNAX
MIA3
ALDOA
RASA1
MAP2K3
H2BC14
H2AC14
RPL28
RPL5
SAAL1
TMEM250
H2BC4
H2AC6
RPS3
CALM2
C19orf53
TOR2A
ZMPSTE24
SNRPD1
YWHAE
RPGR
HSD17B12
H4C6
COMMD9
BOD1L1
UTP3
PPP1R11
MAN2C1
SOS1
EFCAB2
TAF5
FAM200B
SNX17
EIF2B4
ZC3HC1
TBPL1
POLR3B
DCAF8
TPD52L2
ADAM22
PARP6
ATAD2B
PUM3
SNRPB2
MTOR
WDR70
BIRC2
RRP9
PARP3
RAB11A
TRIB1
SH3TC2
SEMA3B
TMEM259
SMG7
HEXA
NBPF1
CAAP1
FRMD4A
FXYD3
MTR
NFKB2
LRWD1
ALKBH4
RPS16
RBSN
SF3B4
MRPL27
EME1
YTHDF1
C11orf49
INPP4B
MBNL2
WDTC1
ATF6
YTHDF2
TCF12
CRB1
SHMT1
PANK4
POLR2J3
DOHH
EPRS1
GTF2B
H4C5
UBA2
PCM1
RPS27
SNX19
SNF8
NDUFA12
TBL1X
NBPF15
BCAT2
H3C12
OSCAR
NDUFA3
SPHK2
RPL18
SART1
DIAPH1
HEATR1
AP1G1
MBTPS2
ZBTB40
SACM1L
C5orf15
USE1
NACA
NAA20
TMEM183A
PARP2
R3HDM2
MBLAC1
TTC33
DPP9
DHX8
CNPY2
NUP107
FARSA
EIF2B3
THEM4
PPP6R1
FAM3C
SYCE2
SUDS3
CPT2
IQSEC3
CDC25C
FAM53C
ZNF286A
SRCAP
LOC730183
RBM45
TTC17
CDC73
NOP56
NUCKS1
H2AX
RPS24
SLC20A1
INPP5F
MRPL24
BTRC
GALK2
COPS2
NDUFAF5
ESF1
TBC1D23
ASB6
PBRM1
GNL3
BUD13
ACBD3
LCMT2
ADAL
H2BC15
H2AC15
SRA1
MRPL30
MITD1
GOLGA1
STYXL1
MDH2
NUP133
PRKAR1B
DGUOK
IREB2
NCOA7
MLLT11
CDC42SE1
CHD1
CALR3
C19orf44
ZCCHC4
COPS7A
RNASEH2C
RBM28
SLC39A3
TSSK6
NDUFA13
SRFBP1
RFXANK
BORCS8-MEF2B
BORCS8
TAS1R1
NOL9
PCIF1
BLOC1S6
GPR180
PARD6A
ACD
TOR1AIP1
TSN
INTS4
ACBD5
MRPL42
ZCWPW2
AZI2
STX4
ZNF696
EXOC7
ENO1
PDS5B
PSMD3
PARK7
ARHGAP19
RPL26
EXOSC6
NCOA5
QTRT1
DCLRE1B
AP4B1
DHRS13
WWTR1
FCRLA
USF1
IQCH
AAGAB
MAGOH
H4C4
ZSCAN30
OCIAD1
AVPI1
TIMP3
LRRC29
SMN2
SMN1
OAZ3
LARS2
PSMA1
SECISBP2L
UBE2D3
B3GAT3
ORC5
ETV3
CISD2
H3-3B
SETDB1
C8orf76
TRIAP1
CDK12
MZF1
H3C8
PYGB
THOC5
RPL6
WDR11
NOL7
PTPN11
IMPDH2
AMOTL1
ETS1
PKMYT1
IFRD2
RAD52
DNAJC11
HEXIM1
FBXO31
TAMM41
TAF12
TPK1
AMACR
CEP135
YAE1
RPS13
RPL22
MRPL44
ZC3H10
ZNF721
PIGG
SLC30A6
TBRG4
BORCS7
FBXW2
C1orf74
GTF3C5
RNF166
CTU2
HSPA8
ABHD10
GTF2H3
EIF2B1
RPS28
NDUFA7
MSL2
DUSP12
MRPL38
COMMD4
SEC11A
OPA1
NCBP3
HSPA9
MRPL33
PHAX
NUP42
H2BC13
H2AC13
SMIM10L1
PRH1-TAS2R14
PRH1
MTAP
ING4
PTBP1
TTC1
NSFL1C
SLC3A2
PRMT5
PEX12
SMG5
UTP25
CBWD5
CBWD3
PINX1
E4F1
KLHL12
MTMR2
TGFA
LTBR
TMEM11
SSNA1
ANAPC2
TMEM248
SLC35E2B
STMP1
MRM3
GLOD4
POLR2M
MUL1
LONP2
ABCC11
ARHGEF12
GATAD1
ALDH1A3
MRPS15
RPL24
PRCC
KRR1
ZNF668
ZNF646
NOTCH2
LRCH4
FBXO24
SRSF2
MFSD11
MAPK8IP3
RMDN2
COX20
ATN1
PEMT
CWC25
CHD1L
RPL35
ARPC5L
RAD23A
ZZEF1
CYB5D2
H4C2
ZNF253
SRPRA
FUS
PRRC2C
SLTM
VAMP1
GPX1
ABRAXAS2
MVB12A
PEX3
ADAT2
POR
MKRN2
DIDO1
POLR2C
MRPL48
GID8
TOMM40
RFC2
MANBAL
U2SURP
GGCX
NFYC
LSM8
COA7
DCBLD2
SAP30
AP5S1
DPH7
PPP1R8
EEF1A1
WFDC3
DNTTIP1
B9D1
TMBIM6
GPN2
TAGLN2
MEOX2
TIGD6
HMGXB3
DDX46
NOC3L
RPL7A
MED22
RANBP6
ISG20
INKA2
DDX20
RBM12
CPNE1
ROBO3
CT45A7
CT45A6
CT45A3
RDH5
S100A3
STK40
RARS1
NDUFA9
AKAP3
TRAPPC4
RPS25
TAF1B
H3C4
DENR
NSMCE1
H2AC4
FBXL18
M6PR
KLRG1
PSMB7
UTP23
CLNS1A
METAP2
RPL17-C18orf32
RPL17
NEK4
GAPDH
IER3
EPHA3
CAPS
ERLIN2
POLR3F
DZANK1
GABPB2
POMP
RAD50
CANX
H2BC17
H2AC17
PNPLA6
YKT6
STAT1
MFAP3
FAM114A2
TIMM50
COIL
AP2A1
PRDX2
NEURL2
CTSA
ECI1
DTD2
SMARCA4
HRCT1
MICOS13
HSD11B1L
TOMM22
SPNS1
C6orf89
SGTA
ZBTB37
EIF4A3
HDAC4
ZNF575
UBE2Q1
ALKBH3
SURF6
SRRM2
PPIL3
NIF3L1
AXDND1
DNAJB1
BTG1
TECR
PRELID3B
ANKRD18A
ZSCAN22
ZNF484
SHPK
CTNS
FRG1
GPATCH4
METTL2A
MRFAP1
USP19
WDR55
LEO1
ALX1
DNM2
VTA1
NMBR
PARL
MEPCE
ZCWPW1
SUMF1
C2CD5
ALG10
AP2B1
MDM4
TXNDC15
RPSA
WWP2
MRRF
HNRNPH2
GLA
NOLC1
ZNF335
IPO4
TRMO
GPN3
FAM216A
ABL2
MYOF
VPS29
RAD9B
SNAPC5
HM13
AGMO
POLE3
C9orf43
STEAP1B
SLMAP
TRIM46
KRTCAP2
BORCS5
SCN11A
WDR48
NTMT1
MLF2
CLPB
DNAJC14
NSUN6
DDX19B
RAD23B
PSMG1
KMT2D
RNF34
SRSF1
C1QTNF3
TTC14
PRPF6
HSP90AB1
PRKCE
FBXW9
SLC35A3
ZNF408
ARHGAP1
CITED2
ANKRD18B
PIGC
PSRC1
UBQLN4
LAMTOR2
FAM168A
CSTF1
AURKA
RABL2B
SHISA4
TNPO2
TRDMT1
EIF3E
PSMD8
ZNF770
DNAH14
AAAS
FITM2
POLR3D
CDCA3
TMEM115
PHB
TCEA2
SMPD3
BOD1
MMACHC
FEM1A
PNKD
AAMP
GSPT1
CHMP4B
NUDCD1
TSNAXIP1
RANBP10
TMTC3
CEP290
AP2S1
KBTBD6
AHCYL2
KBTBD7
CRTC2
DDX23
PPP1R12C
C1orf159
LARS1
UNK
CTU1
INVS
ERP44
PPP1R12B
ZFYVE1
VCPIP1
C8orf44-SGK3
ZNF225
NTAN1
TSSC4
GTPBP2
GTF2H4