ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX535454 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◣ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
GSTA4
FRA10AC1
STX16
MTRNR2L2
SEMA6A
FAM98B
MTRNR2L8
DRG2
DCAF10
TATDN3
NSL1
SMARCD2
GBA
EXD1
CHP1
C17orf75
FAM227B
DTWD1
H4C14
FLOT1
IER3
STX18
TPT1
CDK5RAP1
WDR36
IST1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC5A3
MRPS6
RGPD2
RGPD1
MAN2C1
RAD54L2
TACO1
NUF2
CUL4A
PCID2
BNIP1
DCP1A
ANKRD40
DPY19L4
TRIP4
ZC3HC1
DSTYK
NME1
MTF2
LRRC37A3
INTS12
GSTCD
INPP5F
TMEM242
WDR31
H2BC21
H2AC20
H2AC21
COMMD2
AURKAIP1
RBBP5
H4C15
SAR1B
SLC24A1
TMEM256
TPRKB
STAT6
H4C11
EIF2D
ANP32E
NKIRAS1
RPL15
TTC4
SF3A3
SLC9A1
SLC25A51
LRATD2
CTNNB1
PLEKHM3
NFE2L2
TEFM
NDUFS3
KBTBD4
H4C12
KDM1A
NDUFC2-KCTD14
NDUFC2
PSMD1
PDE4DIP
H4C3
ERCC1
NDUFS7
RPS27
GTF2H2
MTBP
MRPL13
ACOT7
KANK1
ACBD6
ATXN7L2
CCDC107
SPRY4
SLC20A1
PEX3
ADAT2
TTC26
H2BC18
H3C13
PHLDA1
TOMM5
LAMP1
ZMPSTE24
SERPINE2
S100A6
HMGB1
USPL1
DMAP1
HEXIM2
VPS45
MRPL40
HIRA
ASB6
NMNAT1
LZIC
SMG8
PIGC
DDIT4
ZNF827
RBM28
PIGL
WWOX
AMOTL1
TARS2
POLR3B
XPA
TOR1AIP1
RPS6
WDR70
RPL37
ID1
NR1H3
ACP2
TUBGCP3
SIRT4
ANAPC5
NPM1
CCNL1
JUNB
ZBTB45
JRK
RPL3
BTF3
RRP15
ALKBH3
RPL28
ZER1
USP30
VPS25
CBX5
HNRNPA1
MRPL39
DTX2
E2F6
FBXW11
OPA1
ZNF609
FAM228B
SNRPE
SF3B6
DNAJC25-GNG10
DNAJC25
CT45A10
KCTD5
COX16
LDAH
H2BC11
H2AC11
TFAP2B
RPL9
LIAS
SELENOH
AARSD1
LIG4
ABHD13
SNTB1
EEF1A1
NUFIP2
SLC35A3
PDE8A
SSBP2
SAAL1
SPATA24
GFOD2
EIF3G
RCOR3
SOD2
WTAP
ARL14EP
POLR2C
RFXANK
BORCS8-MEF2B
BORCS8
BTG1
FXYD3
ZNFX1
NOTCH2
DR1
PRKCE
FEM1B
ZNF460
G3BP1
ITGB3BP
EFCAB7
SS18
MRPS23
MTERF4
RPS27A
CLHC1
MBTPS2
SLC6A15
RPS3
MTOR
S100A2
RPS20
NSUN4
PTCD1
CPSF4
OTUD7B
ACY1
NR4A1
CLTC
RICTOR
SOX5
SSBP1
SNRPB2
RPS9
ABHD12
RPL11
NNMT
MRPL21
IGHMBP2
COQ8A
SNRNP70
BFSP1
TUBB3
ERCC6L2
PPP6R1
ZSCAN30
MTMR2
SLC44A1
CGGBP1
ATP5MC2
ACBD3
C3orf38
GTF3C6
KCTD3
MRPL1
NCSTN
COPA
H1-3
AGMO
SAGE1
MRPL24
CDKN2AIPNL
RBM45
H3-2
C12orf57
R3HDM2
LOXL4
UCHL5
RO60
H2BC13
H2AC13
MTAP
BCL9
PYROXD2
BOD1L1
POLDIP3
DNAJC14
SECISBP2L
H2AC19
H2AC18
STAT3
NDUFA9
AKAP3
H3C15
H3C14
MOSMO
ZNF76
STARD13
SERPINA3
PGBD2
PTPRG
SEC13
KIF22
UCN2
MIS12
DERL2
TOMM20
KCNMA1
WDR11
ALG1
POLR3F
DZANK1
WWTR1
MRPL53
MRPL48
QSOX1
H1-4
RPL32
IFRD2
CDCA3
SCNM1
LYSMD1
TMEM115
CALR3
C19orf44
PHB
TCEA2
SMPD3
CLPB
BOD1
MMACHC
FEM1A
PNKD
AAMP
GSPT1
PAFAH2
ST3GAL2
CHMP4B
NUDCD1
TSNAXIP1
RANBP10
BTRC
TMTC3
CEP290
PPRC1
AP2S1
KBTBD6
PANK4
PEMT
AHCYL2
KBTBD7
CRTC2
PRCC
MICOS13
HSD11B1L
DDX23
PPP1R12C
C1orf159
LARS1
UNK
CTU1
INVS
ERP44
PPP1R12B
ZFYVE1
PHF12
VCPIP1
C8orf44-SGK3
ZNF225
NTAN1
TSSC4
GTPBP2
GTF2H4
BANP
MAD2L1BP
SYMPK
ZNF444
TMEM11
ORMDL3
NPRL2
CYB561D2
FOXA3
SLC35B4
SCAF1
TNFAIP1
IFT20
GFUS
UBQLN4
LAMTOR2
FASTKD1
SNX17
EIF2B4
RPIA
STAU1
WDPCP
MDH1
SLC4A2
CDK5
ING3
TTC33
TTC13
ARV1
STK25
ABCF2-H2BE1
ABCF2
CCDC146
SCRIB
INTS9
HMBOX1
ZSCAN22
TIMM21
FBXO15
GATB
ACTR1A
CCP110
C16orf91
ZNF749
COX7C
BOLA1
MED15
JOSD2
NOP14
GRK4
ZNF337
UBR2
CLEC16A
ZFYVE19
DNAJC17
AP2M1
TMEM127
CIAO1
TFEB
MAF1
TMEM59
TCEANC2
WDR87
SIPA1L3
ZNF56
C19orf53
TSC2
NTHL1
WNK1
SIRT2
NFKBIB
UBAC1
PHF13
DESI2
TRAPPC3
RPS7
ZFYVE28
CFAP99
SMARCAL1
DFFA
VPS50
HEPACAM2
BUB1B
KMT2B
RIC8B
ATP5F1D
DCAKD
RPL8
TBL3
NMT1
ZNF189
MRPL50
TFPT
PRPF31
SESN1
ELOC
LRRC29
ING4
DYNC1I2
RPGRIP1L
FTO
IPPK
CCDC90B
FBXO46
SUFU
BUB3
PSMD11
RAB5C
ZNF235
SOX6
C11orf58
USP48
ATP5PO
CAPN15
TMEM160
THRAP3
RANGAP1
THYN1
ACAD8
SLC25A19
RAB1A
LETM1
FBXL19
ZNF169
CNIH4
ZNF420
PRRG2
NOSIP
TRAF7
PEX26
OSCAR
NDUFA3
TMEM101
CCAR2
FBXO48
APLF
COPS7B
NUDT13
VIPAS39
AHSA1
CTF1
TRAK2
STRADB
CCDC150
ZNF224
B3GALNT2
RBL1
CHCHD3
RALBP1
MARS1
ARHGAP9
GPANK1
CSNK2B
CLP1
SNX27
MED23
ZC3H11A
ZNF554
DDX49
COPE
ZNF354A
PTDSS2
ZNF350
KAT7
RABAC1
FAM193A
BIRC5
CLDND1
STK17A
RPL18A
FAM185A
LMNB2
PANK3
PDE6D
CTDP1
ZNF384
RBM6
PA2G4
SMUG1
NFXL1
TMEM43
CHCHD4
GPKOW
UFSP2
SEPTIN9
NDUFS2
CDK5RAP2
TMEM102
UTP11
SERPINI1
PDCD10
ZNF230
UBE2Q1
HTRA2
WRNIP1
CCDC174
ZW10
FAM222A
ZNF37A
NUP153
TBX6
PNPLA6
CNOT4
AKIRIN2
EXOSC4
TMEM245
ZNF133
CNOT1
RPS6KB2
LTA4H
RPS19
BICD2
HBP1
UBL7
ZNF527
DUS3L
SLMAP
SDCCAG8
CEP170
ZCCHC4
WBP2
SLC33A1
POLR2E
ZNF226
FDPS
SPHK2
RPL18
HSPA13
PIGU
RPS13
MXI1
RALGAPA2
RPS26
LIN37
PGBD4
EMC7
SEC61A1
PHF23
INO80B
COMMD9
TIMM13
ZNF2
LUC7L
ZGPAT
ARFRP1
SYPL1
PCM1
PHB2
SCAMP4
ADAT3
CIAO2A
C1orf109
NCLN
CFAP410
QTRT2
CCDC191
TMEM143
PTBP1
METTL26
DGAT1
GUSB
RPP40
ZNF32
ZNF547
TRAPPC2B
MTMR9
SPATC1L
ENOX2
TXNDC9
EIF5B
ZNF419
WDR53
FBXO45
AHCTF1
CIC
SEC11C
MED27
RPL29
GALK2
CAND1
TTC1
ZCCHC8
ZNF484
PSMD4
RAB29
THOC6
HCFC1R1
ASXL1
CWC22
SLX1B
SLX1A
BOLA2B
BOLA2
CDK8
TERF2
ZNF343
WAPL
RPL23A
TMEM186
PMM2
AQR
TMEM69
INTS1
TSACC
CCT3
PRR14
GINS3
GSK3A
ZNF451
ZNF500
FAM207A
USP35
KCTD21
PSMD2
MRPL20
ZBTB7A
RAB30
GPBP1L1
NFKBIL1
ATP6V1G2
UBE2J2
CWC25
NOLC1
MGRN1
MAX
MED11
PSMC4
IGSF8
DDX47
NCBP2AS2
NCBP2
COPS7A
EIF1B
ZMAT5
UQCR10
GID4
ATPAF2
UBA52
PSMF1
ALG10B
LSG1
ILF3
SSR3
CDC25C
METTL3
SSR2
BOLA2-SMG1P6
ZNF747
ZSCAN32
ZNF174
PEX12
ZNF227
ADSS2
VAPA
PES1
SCAMP3
RPS3A
GPR108
THAP1
TMEM222
SYNGR4
WASF1
CDC40
LEMD2
L3MBTL2
USP31
SLC38A9
COPS2
KBTBD8
RPL27
ZNF805
PRKCI
HIRIP3
ZNF17
EXOC4
UTP3
PPP6C
MEN1
GPR137
ZNF862
ZNF773
POLR2J3
MTR
SUPT4H1
CFL1
FAM53C
VPS4B
SUGP1
MAU2
GFM1
ZSWIM9
LIG1
TSN
C12orf43
RNASEH2C
ZNF25
NCDN
KIAA0319L
RETSAT
ELMOD3
TOR2A
ZNF586
NUTF2
CENPT
SASS6
CARS1
ZNF567
NDUFB5
MRPL47
CLPP
RACGAP1
ZNF140
CSRNP2
PPP1R13L
POLR1G
DPP9
FBH1
ANKRD16
PRKCSH
CCDC151
PSMB4
B4GALT7
TOR1A
ABRAXAS2
RPL22
SKP2
LMBRD2
ARMH3
ZNF277
DOCK4
PSMD3
EIF3C
TMEM199
POLDIP2
ZNF584
VKORC1
ATP5MF-PTCD1
ATP5MF
EIF3D
SMN2
SMN1
POLRMT
GPT2
EIF3CL
YJU2
ALG10
SERP1
EIF2A
TMEM33
N4BP2L2
TRMT1L
SWT1
AKAP8
XPOT
RTEL1
ZNF684
DHX8
DEDD
CCDC124
ZNF45
VEZT
FGD6
EIF2S2
TUT1
SNAPC3
CIAO3
KATNB1
CNOT6
TMED9
VRK1
CXXC1
IPO7
COPS8
ZNF436
DNM1L
RAB3C
TMEM41A
MEA1
ZNF165
PSMB6
ZNF628
AP2B1
INTS4
ESCO2
NUP205
MRPS18C
HELQ
ZNF548
MRPS16
ZNF764
GGPS1
ARID4B
IFRD1
ABT1
SKIV2L
NELFE
WDR46
PFDN6
DHX33
SF3B2
SFXN5
TOMM22
PUM3
RPL12
LRSAM1
SCYL3
MRPL54
CRK
RAB7A
APH1A
ALKBH8
YIPF2
TIMM29
DARS2
CENPL
BET1
COG2
KRR1
GFM2
CAPN10
KHDC4
TSNAX
GEMIN6
RFX1
MIA3
FAM168A
ITPR1
KLHL20
IPO13
SNAP47
JMJD4
ZNF585A
ZRANB3
R3HDM1
SNAPIN
EIF3F
BRIX1
USP15
MORF4L1
NOP16
HIGD2A
APBA3
ZNF416
MYBL1
MRPS25
ABCC5
ZNF599
SART1
PPIP5K2
ZNF180
TLE4
DMAC1
TIMM22
DOHH
RAD52
TRUB2
COQ4
CNPY2
DCAF1
DPM3
DNAJC28
RWDD1
RPL34
RUVBL1
NUP107
TRABD
ACLY
SERBP1
FBXO38
TRUB1
ZNF691
ZNF221
ELP6
SETDB1
OAZ3
UBXN8
TPGS1
MAMSTR
BABAM1
PARK7
WIZ
DNM2
RAD51AP2
LTN1
DPH2
MRPL3
UBE2V1
TMEM94
SEL1L
PRPF4
CDC26
PRAF2
SLC39A13
ETFDH
C4orf46
EMSY
ZSCAN5A
NUMA1
LRTOMT
ZNF565
ZNF146
SH2B1
SH2D6
ZNF776
SETMAR
CEP57L1
NAA38
CYB5D1
TOGARAM1
KLHL28
DNAJC11
REXO2
TPR
ODR4
NR1H2
MVB12A
CHCHD6
NFKB2
FOXJ3
TMEM258
FEN1
KIF15
KIAA1143
NFATC2IP
TUFM
BLOC1S5
WDR24
SMG5
CCDC77
WASHC3
TTI2
NOP53
FIS1
ZNF211
SHPK