ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

PAXBP1
GOLM2
KCNIP4
ZMYM3
CMSS1
FILIP1L
SNX16
CRYBB2
TNRC6A
ARHGEF35
ITPRIP
KLHDC9
BAIAP2L2
NBPF1
ELMOD1
FANK1
C16orf87
MTRNR2L8
SLITRK3
ELAVL2
SPDYE14
SPDYE10P
ARHGEF5
KRTAP9-6
CLTC
MTRNR2L2
CPLX2
LYRM1
DCUN1D3
COL6A1
KRTAP2-4
UBAP2L
C1orf43
ERRFI1
TES
RAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOTCH2
E2F3
EREG
PDE4DIP
ECHDC1
H2BC18
H3C13
UBE2Z
SULT6B1
SUV39H2
COPS7B
ANXA2
ACTB
C11orf97
SPATA16
SLC35B1
APPBP2
SIMC1
CBWD5
UBC
IDNK
H2BC21
H2AC20
H2AC21
CTAGE8
CTAGE4
HMGA2
ANTXR1
PDLIM5
HNRNPA3
SHTN1
KRTAP10-12
RPL8
ARFGEF1
YBX3
SOX5
NAV3
LUZP2
ACTG1
ZNF595
ZNF718
H3C15
H3C14
MND1
CHEK1
RAB11FIP2
TOB1
SPATC1L
TCERG1
NCOA5
GOPC
CUL4A
PCID2
TUBD1
RPS6KB1
DSCC1
SMNDC1
ZHX1-C8orf76
ZHX1
IER3
COMT
ADAM15
SLC25A32
DCAF13
STRIP1
MFAP3L
FOSL1
ARHGAP39
CBX3
STK3
UBR5
SLC12A8
EIF3F
NFE2L1
DIRAS2
GABRA2
FBXO11
TMSB10
PCMTD1
EGR1
SRPRB
SLC25A3
HECTD3
ID1
PRKAR1A
USP25
VCP
UBE2O
AANAT
FH
H2BC17
H2AC17
H3-2
CSNK1G3
FAHD2B
KRT19
PLA2G7
RPS20
RAB4A
ZCCHC4
MFSD14B
KLLN
PTEN
NCK1
CSNK2A2
FRMD3
SRSF2
MFSD11
EEF1A1
ZNF280D
ERMARD
ABHD10
EBPL
RECK
UBE2V1
LMBR1
H2AX
GALNT10
ATF1
DTD1
CPSF6
FMNL2
DR1
RMDN1
MAML1
BZW1
NEMP2
ZFP36L1
CPNE3
RXFP3
NSFL1C
PDXDC1
TRIB1
SLC16A5
POLR2M
OGFOD3
HEXD
MRPS26
XPC
LSM3
FGGY
ZBTB38
AREG
CXCL2
AFTPH
C7orf26
OSER1
GCFC2
ENTPD7
ZFP3
SLF1
KIAA0825
TMEM71
PHF20L1
HERC6
EXOC6
BRAF
SLC5A8
RPL18A
CKS2
VWA2
KRTAP2-2
ZFP91
SLTM
RCN2
GPD2
HMGB1
UBE2D1
SMARCD2
OGA
FAM8A1
ZNF800
SEC61A1
KANSL1
LRRC58
CEP55
RAD21
PPP1CB
DUSP5
CIB2
CCSER1
CBWD3
HDLBP
MALSU1
ANKRD18B
PTMA
VANGL1
KRTAP2-1
TMEM43
CHCHD4
CHD1L
PLEKHA8
SMC6
GEN1
H2BC4
H2AC6
SLC30A5
FBXO34
RMI2
NMI
TCF7L2
CTAGE15
CLDND1
DDX59
SGK3
FAM149A
SCO1
ADPRM
CCDC88A
EIF3A
FAM120B
SLC20A1
INPP5F
EXT1
FDX1
XYLB
TRIM26
EPM2A
PSKH2
PSMC5
FTSJ3
LRRC37A3
WDR43
RESF1
OXR1
SFT2D3
MTHFS
KCNS1
RPS2
H2BC11
H2AC11
SCAF4
UHMK1
FBXL4
APEH
SIRT5
FAM160B1
CRPPA
PHTF1
FAM221A
SLC35F3
HNF4G
KRTAP2-3
ADAD1
SRRM2
DUS1L
ZKSCAN1
NFKBIZ
NDUFAF6
INO80D
HSF1
BOP1
MIDEAS
MLYCD
CADM2
EGFR
CBWD6
LRRC59
CLN5
PROSER1
NHLRC3
GRPEL1
C5orf63
SLC38A2
MTAP
NFIB
VPS36
LEPROTL1
MAP2
SPG7
GRK3
WASF1
CDC40
FEM1B
GNAL
LOC100287896
LIPT2
NOMO3
GCLM
ENTPD6
FECH
FRG1
TTBK2
TFRC
DYNLL2
NCOA6
TRRAP
H3-3B
TKT
GPRC5C
KRTAP4-5
ACOX3
TRMT44
MKRN2
HNRNPL
DENND4A
WDR1
KLHL7
SUPT20H
ITGA6
MAP3K21
MAEL
ILDR2
ENGASE
SH3BP5
SNX9
REXO1
STK40
DHX35
BTF3L4
CUL1
SCYL2
DEPDC4
SLC7A5
SPTBN1
WDR4
CHMP7
PCLO
CDK17
EMB
ARRDC4
KITLG
LRP11
NCKAP1
RPS19
RAB18
POMGNT2
LIG3
C10orf95
EPB41
WASHC1
RAN
PAM
NDEL1
USP10
PPP1R2B
AK4
FKBP1A
ZSCAN25
WDR45B
RNASEH1
JMJD1C
VEZF1
ZDHHC3
EXOSC7
TAPT1
TMEM268
MAP11
HOMER1
TMX4
BFSP1
ZNF664-RFLNA
ZNF664
CCDC92
ZBTB7C
INPP4A
FA2H
MLLT3
RPS6
USP36
PET117
KAT14
SMC3
TRIM25
ATMIN
PANX1
TPD52
NDFIP1
EHD4
REST
TMEM70
SYBU
SPHKAP
PTK2
NOCT
IMPACT
CKAP5
ODC1
ERN1
EIF5A
DIS3
RANBP9
GEMIN4
CLK4
PTPRA
C3orf70
NFRKB
VOPP1
ZFHX3
MYZAP
GCOM1
CDK8
ABRAXAS2
DDX1
TMED7-TICAM2
TMED7
NXF1
MCL1
KCTD18
ASAP1
ZNF124
PDCD5
LRRCC1
SPEF2
LPGAT1
XPR1
ATP2A2
FUCA2
SLC7A1
DEPDC7
BANP
FAM207A
UBE2J2
CFL1
TRMT1L
SWT1
DNM1L
TIMM23B
PARG
CPOX
YBX1
LYST
GRK5
KAZALD1
LGALSL
ZNF337
CDKL3
UBE2B
DNAJC25-GNG10
DNAJC25
R3HDM2
CLK1
SREBF1
CD38
TYMSOS
TYMS
IDH2
CST3
SH3D19
TCL1A
MALL
KRTAP9-2
STX18
PEX3
ADAT2
LOC100289561
PELI1
ARSG
PER2
PTDSS1
MTERF3
SLC16A6
SLC25A36
CFLAR
MKI67
NDUFA6
TIFA
PCTP
MAP3K14
DSE
ARHGAP31
RWDD3
FAM220A
GMNC
PKP4
CCDC148
CEP68
TSPYL4
HOXB9
TRIM47
LAMA2
SEC13
KPNA1
MFSD14C
EIF4A3
RABEP1
PSTK
RAD23B
GAPDH
SMAP2
TMEM65
TRIM39
AEN
PTS
DYNC1LI1
LOC100996750
KRTAP4-7
COG1
PIGO
MLEC
AP3M2
CD55
CITED2
TRIP12
FBXO36
HDDC2
CNP
ZDHHC7
SLC25A4
MYO5A
STEAP3
TWSG1
MIB1
PLAAT1
MORC4
PSD3
SLCO6A1
WAPL
SOD2
WTAP
TXNDC15
TMEM229B
ELAC1
H2BC13
H2AC13
KDF1
YPEL2
IQSEC3
POLR2D
C9orf85
ABHD17B
TMEM251
MOAP1
INTS6
NTAQ1
PTP4A1
GSTO1
GCSH
PLEKHH1
SCN8A
OTOP1
SERP1
EIF2A
GHITM
KDM3A
ZNF623
TBCD
RFX3
APBB1IP
GTPBP1
MIF
ARHGAP32
NEDD4
ARHGAP29
MAFF
DPY19L2
ANO2
AMMECR1L
ADAR
RALY
CPT2
PXK
OCIAD2
NUP50
APOLD1
MPP7
SPOPL
BAG3
PDCD4
CA8
B4GALT2
SLC12A5
ZNF80
KRTAP4-12
CASR
BOD1
C7orf25
TIMM23
DDX42
CCDC47
SMIM19
SLC20A2
CEBPG
RFX7
KMT2E
TAB2
MTUS1
TDRD7
ZBTB34
ADI1
KLHL9
REEP3
TEX9
DDX17
BACH1
PITPNC1
UNC79
BTBD7
CMTM7
NKIRAS1
EIF2D
KBTBD8
TMEM109
SRRT
ERI1
NFYC
CUL7
PRDM2
BLCAP
RNF32
NR1D2
BCAP29
PARD6B
STRIP2
GNPNAT1
TOMM34
TLK2
OAT
PANK1
EFR3A
MAGI3
ARHGAP42
NANOS1
PATJ
DSG2
AXL
CYTL1
RBL2
RPL35
ARPC5L
ELMO2
HSBP1
DDT
C1orf53
DHRS13
DBNDD1
SETD3
CCNK
GLRX2
BRD3OS
MBTPS1
TXN
ZNF441
MAP3K5
JAK1
SMCO4
BTBD3
RTKN2
SRCIN1
GAS8
HTATIP2
PTPRD
KRT8
KRT18
PARK7
GORASP2
ATXN7L2
OTUD7B
ADNP
TNRC6B
BORCS5
AZIN1
UBN2
UBE2L3
PKD1
KPNA2
MAP3K7CL
ITSN2
SPTLC2
NUDT18
GGCT
FAT1
FBXO43
ADNP2
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ALOX5
ZNF462
SLMAP
RAD54L2
MCMBP
AGK
RUBCN
HNRNPD
CYP51A1
RPL14
SP3
NPM1
SLC39A8
HESX1
APPL1
EGLN1
ANKRD36C
ZFAND5
NCOR2
AMOTL2
CDYL2
BMP4
LRP5
MICALL2
TSPYL5
SERPINB9
PDE8B
RCAN1
PCYT1A
IREB2
SAAL1
HNRNPUL1
NUDT4B
NUDT4
P4HB
TPGS2
TGFBR2
FBXL5
ENTPD4
ARSB
SEMA7A
HELZ
ACTR5
FZD6
KRTAP10-2
SPHK2
RPL18
MSL2
KDM1A
TRIM35
PTK2B
SUGCT
MPLKIP
CCZ1
NBN
FBXW4
UQCRFS1
SLC38A10
PTPN4
PKD2L2
CCDC149
TRIB3
ANKRD36B
NMT2
FBXL13
ARMC10
ORAI1
SDCBP
CCSER2
NUDCD2
HMMR
HSPG2
PITX3
HLA-B
MOXD1
CPXM2
AKIRIN2
IPO8
NFATC3
SNX19
PRPF19
THAP12
GVQW3
UBE2D3
RPL13
STAMBPL1
AGO3
MMAA
MAPRE2
TERF2IP
KARS1
ANKRD46
GLCE
SYNCRIP
PARP8
PM20D2
PARD3B
KLHL2
MSRB2
IMPA2
CASD1
TMED3
HYI
ROCK1
ARNTL
MYEF2
CTXN2
SNPH
HEG1
SLC45A3
SLC25A52
FSTL1
DDIT4L
CTAGE6
C10orf53
CTDP1
FOXJ3
RPL6
SZT2
MED8
PTPN11
EHBP1
TWF1
BTF3
RMND5A
RNF103-CHMP3
CMTR2
RASAL2
YWHAZ
SFXN1
PLEKHG2
CLSTN1
GALNT7
SEC24D
ARNTL2
RBPMS
PDLIM3
RBMS1
BDNF
TMEM245
MON2
CCZ1B
PGAP2
CYP4V2
KLF6
GRB2
SLC45A4
PTPRE
RGPD8
RGPD5
NT5C2
RGPD6
RHOU
DNMBP
RNF170
HOOK3
CAV2
ASAP2
TPD52L1
IL17B
PIK3CA
PRRC2B
ANXA4
AAK1
DENND4B
SNX14
KDM3B
RAE1
SH3BGR
LCA5L
LOC100421372
HSPA14
CDNF
CBX8
TRIM65
ZC3H4
TSPAN14
UBALD2
PSEN2
GEM
SLK
POTEH
KRTAP10-1
HOXB3
ATAD3B
TOMM40
TIGD1
EIF4E2
PHAX
DPH6
CDCA7L
CACUL1
GXYLT1
AMOTL1
PHC2
DEK
TTC39A
ANXA11
L3HYPDH
JKAMP
CXADR
STIM2
ANKRD6
CSMD3
B4GALT6
ICA1L
CD44
NDST3
ICA1
FAM110B
RBM20
LRP5L
PPRC1
FBXO31
MAP1LC3B
MYL12B
AARS2
TKFC
DDB1
AP3D1
IGSF9
ATPAF1
ELF2
OARD1
DCUN1D4
NFYA
SARAF
MYCBP2
SMARCC1
GFOD2
ANKRD36
NOMO1
MFSD14A
PHF3
OTUD5
SEPHS1
TPM1
MET
LRRC8D
PAG1
DHRS4L2
ENDOD1
UACA
LAMC1
MAP2K4
PRSS12
ACADS
ZNF532
CNTNAP3
LEMD2
C8orf76
DDI2
POM121C
FAM110A
CDON
ZNF326
DHX15
TESMIN
CDK16
SPTAN1
TANC2
STEAP1B
DYNLT1
ZXDB
RANGAP1
UBXN4
GATM
SPATA5L1
NAA35
SETD4
DDX10
ZNF799
ZC3H7B
IFNGR1
KIAA1109
SENP6
PCDH1
WWP1
BTG3
PRNP
CNOT6L
POMK
GTF3A
AP1S3
TBC1D1
NTN4
KCNG1
PNLDC1
RPL22
DIMT1
AKIRIN1
ZNF354B