ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◣ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
IPO13
POLR3F
DZANK1
DYNC1LI2
CACTIN
NME6
NUP205
FAM187A
EFTUD2
CCDC103
MAPKAPK5
NEUROG3
PSMG2
CEP76
TAOK3
SUDS3
RPL21
NUP85
MRPS7
GGA3
VDAC2
NVL
DCTN1
HSPA9
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
POLR2E
C19orf48
RBKS
BABAM2
ATP5MG
SEC61B
PAK1IP1
C6orf52
SRD5A1
NSUN2
SMC2
EXOSC5
BCKDHA
ZNF576
IRGQ
ACTR10
MRPS5
NCLN
COX7A2L
TMED1
SLC35B1
TTC8
PI4KB
TSN
PNO1
NEUROG1
LYRM4
FARS2
PDAP1
BUD31
GOLGA5
FARSB
PDE6B
ADK
AP3M1
BLCAP
PES1
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
RPS23
ATP6AP1L
IQCG
RPL35A
EIF4ENIF1
ZNF503
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
SELENOF
HS2ST1
FRG2C
RBBP5
SART3
ISCU
CDX2
NDUFA4
USP1
PSMD12
NEUROD1
ANAPC7
ICE1
CDCA7L
PCBP1
UFM1
TMEM70
ELOC
APOM
BAG6
PROSER1
NHLRC3
OSGEP
APEX1
DUX4
DLL4
PAF1
MED29
MYRIP
SF3B3
COG4
ATOH1
MRPL11
RABGGTB
DLX4
XPNPEP3
ST13
ST18
INSM1
CABIN1
RPS12
PTGES2
PIN4
VEZT
FGD6
ZGPAT
ARFRP1
RPS29
LRR1
OR6B2
NDUFA10
RPS27A
CLHC1
EIF2S3
RBPJ
NFKBIL1
DDX39B
ATP6V1G2
FRG2
HES1
GALNT10
GADD45GIP1
RBL2
POP5
BNIP3
RPL7
RDH10
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
DNAJB8
PCBD2
TRIP10
GPR108
DTNB
LPIN1
ID3
ZNF746
RAB11B
MRS2
ANKLE2
NEUROG2
HSPA1B
WDR6
SHB
GADD45G
ANKRD1
MRTO4
EMC1
ACOT2
PDE12
SEC11C
STK36
RNF25
PRUNE2
DAPL1
FGFRL1
ZNF664-RFLNA
ZNF664
CCDC92
FZD8
GBX1
LEFTY2
SEC22B
PMAIP1
PDHX
APIP
HESX1
CCDC33
MSX2
TLE2
SKIL
NFE2
EHF
GTF3C4
DDX31
AXDND1
RYBP
NKIRAS1
NR1D2
ARHGAP11A-SCG5
ARHGAP11A
ZNF704
APLN
ALKBH5
TPRA1
ZNF383
SUCLG1
PLA1A
MBNL2
RPN1
MSX1
FRAT2
NXPH4
SPIN1
FOXC1
DUSP6
MAL
ZNF649
TIGD1
EIF4E2
PAX8
CDC73
ARHGEF38
MAST2
ACOT1
ID2
RARA
LIG3
GABRB2
TLE3
TVP23C
UBE2I
SPCS1
GLT8D1
LYPD6B
OAZ3
TRPM3
AP3D1
CNTN4
SRSF11
LRRC40
MEOX1
UPF3A
SLC25A6
S100A10
GSR
CCDC200
RTL10
GNB1L
FOXP1
METTL24
SKOR1
LIN28A
LMO4
FTL
CNPY2
GC
RAN
CERKL
TPM1
MELTF
KDM6B
HOXB9
RARB
RIMS1
RUNX1T1
BCAT2
BFSP1
RAD54L2
RSPO4
RBBP7
OTX2
NEFH
ANTKMT
METRN
B3GNT4
KRTAP2-1
KRTAP2-2
KCNK2
CALM2
CDX1
TMEM275
DMBX1
PRSS47
NTNG2
GSX1
CYP26A1
AP1B1
CBX4
TBC1D8
PDHB
TMPPE
GLB1
COL11A2
DUSP4
SLC22A24
GATA4
LCOR
PKDCC
SYNJ2
MKRN2OS
MKRN2
RPS10-NUDT3
RPS10
KAT6B
USP17L20
USP17L22
USP17L11
USP17L21
USP17L12
UBXN11
CD52
KIF21B
USP17L18
USP17L19
HOXB1
INKA2
MTCH2
ADM
APBB1IP
BANP
CLEC10A
PHLDB2
ZNF850
FBXO32
NAGLU
DUSP14
C15orf61
SHROOM1
CCDC174
WDR74
DDX3X
KRT8
KRT18
TNFRSF19
PCLO
OTP
ST6GALNAC3
COCH
SERTAD2
MRPL38
SMARCA4
KMT5A
HOXA3
SNX1
CIAO2A
BICRA
GTF3A
RNF207
CPVL
CHN2
STRADA
FOXP2
KAZALD1
LYPD1
KLF17
SNRPA
C19orf54
LPCAT3
MLH1
EPM2AIP1
BCOR
EIF4H
IRX4
C16orf91
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB17
IGFBP6
SOAT2
SLC4A8
GALNT6
RBM26
GRHL2
HNRNPD
ZNF891
ZNF10
ZFP37
MEF2B
SMAGP
NRDE2
PAH
ASCL1
SEPTIN2
HDLBP
HECTD3
REC8
OTUD7B
PNPLA1
NCOA2
ZMIZ2
H3-3A
KMT5C
RNF32
MYSM1
PCDH8
CNR1
PLEKHA6
TMEM88B
ANKRD65
TCHP
SLC30A4
CLDN9
TCF7
SCAMP4
ADAT3
TACC1
CLDN15
KCNJ4
CNPY3
JAKMIP1
WNT3
COL23A1
DYNLT1
ZNF436
ATP6V0A4
MACROH2A1
JAK1
MACF1
TAS2R8
TAS2R7
MTRNR2L1
HOXA1
ZNF397
VENTX
TMPRSS4
METTL11B
BRWD1
JUP
SPATA25
CTSA
ZNF395
NEURL2
FAM53B
PCDHAC1
AQP7
SYBU
CEMP1
USP44
AGO1
NR2C1
STX18
USP17L15
MARVELD3
KCNB1
KMT2A
NRG1
SH2B1
PCTP
CDS1
SEMA6D
GATA3
PEX14
DFFA
KRTAP12-1
SERPINF1
ZCWPW1
MEPCE
RPS24
POLR3A
MECOM
ESRRG
EOMES
BEND4
OR51T1
MAPRE1
FBXL4
SERTAD3
MAPK12
ANXA9
GYG2
CNN2
RUSC2
KCNN2
SH3YL1
ACP1
KCNS3
P3R3URF-PIK3R3
P3R3URF
HINT1
STON1-GTF2A1L
MDM2
AKAP10
BAMBI
PRELID3B
GJA10
CLEC4G
COX5A
ADAM17
ERI1
ERRFI1
SOD2
ACAT2
TARBP2
MAP3K12
PRKD1
ZBTB25
ZBTB1
SLC35E3
ACYP1
ZC2HC1C
ROGDI
PKIB
LIPK
EVC
EVC2
NELFA
PRDM10
NANP
TRAP1
ZNF248
PLXNB1
CS
CNOT2
UFSP2
C4orf47
KDM3A
IGF2BP3
CENPBD1
CTF1
BCL7C
DNAJB5
RBBP8NL
BTBD3
PFN2
MRPL34
ABHD8
LIX1
YTHDF2
MAP2K3
CDC42EP3
SLC40A1
METTL27
ZNF90
CLGN
NFIC
CDC42SE2
ZSCAN30
KDM4C
BBS9
KCNQ4
MINDY2
PLA2G4D
ING1
PSMA7
KDM7A
SGK1
PIGU
PTPRG
CATSPERG
CLK1
RBMS3
FAM162A
CCDC58
CTSZ
IKZF2
NTAN1
CPLX1
RPS3A
DHRS3
FAM110A
METTL25
CCDC59
ZDHHC17
ANKRD63
KAT6A
CTBP2
ACTB
MUC20
TMEM211
GATD3B
GATD3A
GLI1
NRG2
PDZRN3
HES3
CXXC4
RGPD8
RGPD5
EIF5
ORMDL3
BCO2
KLHL4
DONSON
PEX2
HES7
PDE4D
ZNF485
ZNF341
MDK
ABLIM3
SNX3
ABCC6
ZBTB17
NOL4
ZBTB20
RAPH1
HIC2
TSHZ1
HSPA4L
ZNF827
LAD1
PPP1R13B
FSCN1
CMTR1
RPS8
SYDE2
EPS8
TRIP12
FBXO36
RILPL1
SLC11A2
ZFAND6
TBX19
CLCN3
OTX1
NAA40
NPNT
GOLM2
IGFBP2
RHOBTB1
ARHGAP10
ZP4
HOXA4
LBX1
HOXA2
HOXB3
NBAS
ADAM18
DCTN3
ARID3C
PHOX2B
CCN1
LZTS1
TMEM120B
PRRX1
TLE4
MYLK4
SP5
ANK2
FGF19
DNAJB7
LRATD2
KDM2B
TMEM107
ARID3B
RGS12
CNTN1
MALRD1
SMPDL3A
DSCAML1
MTRNR2L2
MSH3
DHFR
GRSF1
NR2F1
ARSG
KDM8
CR1L
TRABD2B
HOXB4
PRDM12
HOXC4
MEIS2
TBX3
ZFHX4
RASSF2
PAX6
EVA1A
HOXC5
IER3
FLOT1
NDUFS7
NEK3
FGR
IFI16
TCF7L2
PLEKHO2
INAFM2
SPATC1L
DBX1
RNF149
SH3BP2
SULF1
LYL1
CACNA1D
ZNF608
VOPP1
HNRNPA2B1
CBX3
HUS1
HEXIM2
ETFBKMT
TMEM14A
PANK4
HES5
TESC
ARID5A
CITED2
ABCG2
NEO1
TLE1
ZFHX3
KCNAB2
JAK3
ARHGAP24
STK38
NUTM2D
PARK7
CCPG1
C15orf65
ID1
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
C11orf24
SASH3
RAI14
C12orf73
ATG16L2
HOXC6
HOXD3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
NCOR2
GRHL3
SLCO4C1
CCDC88A
SLC7A5
SPECC1
ARHGEF10L
NADK
ERCC1
PHC2
DGKZ
SNCG
MMRN2
PLAGL1
BIN2
ENO1
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
REV3L
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
CAMTA1
PLEC
WNT10B
POR
LRRN4
MEF2C
TRAF4
ZSWIM6
MEF2D
KMT2E
MXI1
SOX21
RASSF5
MTRNR2L8
LNPEP
RARG
IMPG1
SPG7
CPSF4L
DENND2D
PPP1R18
ZNF367
SHOX2
RSRC1
DIAPH3
IQCH
AAGAB
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
LRIG3
ATP23
ZNF718
ZNF595
PNKD
PCNA
POLR2J3
TUBB
SYNPO
IQGAP2
SPACA1
LRIG1
TYRO3
NTRK2
CLDN2
RNASEH2B
GPAA1
EXOSC4
PPIB
H6PD
SLC9A1
SIRT4
PDPN
RXRA
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
USP3
ADCY7
TRIM48
TXNRD1
MUC12
MOBP
FAM120B
ARHGAP4
CYP51A1
SMARCD2
PKM
IFRD2
PRDM1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
ADORA2A
RNF166
CYCS
RNF139
SH3TC1
DYNLL1
SP7
ZDHHC4
BAIAP2
CEP41
HMGCS1
ARIH2
CBWD5
CBWD3
LTBR
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
ERI3
ZNF740
CSAD
KCTD6
CPT1A
DTX4
IL6R
PRSS56
AKIRIN1
KIF26A
SLC35E2A
ZFX
ABHD11
KANSL3
FER1L5
CYTH4
HOXB5
MYEOV
LRGUK
PTGES3
HAND1
FOS
PCDH11Y
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
C12orf29
RND3
SRPRA
HHIP
HNF1A
FCHSD2
SSX2IP
DMRT3
CTTN
PXYLP1
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TBX2
TRMT6
MCM8
ADGRL2
SLC39A13
CSRNP1
BAZ1B
SLAMF8
ANKRD13D
TPST2
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
SEMA4D
TSPAN16
TTI2
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
FAM89B
EHBP1L1
CLTC
SEH1L
RFESD
CDC42EP2
ZNF25
VANGL2
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
KCNH2
SLC10A2
IL21R
ZNF3
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
ERLIN2
RASGRP2
ARHGEF1
PEAK3
MRPS31
H2BC5
H1-4
GFRA3
RAD50
MIDN
MAP1S
EPM2A
PDE1B
PKNOX1
WDR59
ATP8B4