ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584306 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◣ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2A
PSMD1
NME6
RABL2B
MAPKAPK5
TAOK3
SUDS3
RWDD1
CACTIN
POLR3F
DZANK1
VDAC2
DYNC1LI2
NUP85
IPO13
NUP205
HSPA9
VTI1B
PSMG2
CEP76
GOSR2
RPL21
POLR2E
NVL
SEC61B
C19orf48
ATP5MG
NEUROG2
TBCK
AIMP1
FARSB
FAM187A
EFTUD2
CCDC103
ACTR10
EXOSC5
BCKDHA
MRPS7
GGA3
LBX1
STAM2
HADHB
HADHA
REXO1
ZNF576
IRGQ
PAK1IP1
C6orf52
PNO1
DCTN1
SKP1
SRD5A1
NSUN2
BLCAP
STAM
PES1
CAPRIN1
TSNAX
LYRM4
FARS2
NCLN
TSN
SUPV3L1
SART3
ISCU
UPF2
ANAPC7
CDX2
RPS23
ATP6AP1L
COX7A2L
IGFBP2
MRPL11
ZRANB2
SF3B3
COG4
FZD8
VEZT
FGD6
NEUROG3
PCBP1
XPNPEP3
ST13
DNAJB7
IQCG
RPL35A
ARHGAP10
TTC8
GOLGA5
VARS1
RPS27A
CLHC1
NDUFA4
HES3
SLC35B1
PDAP1
BUD31
ADK
AP3M1
RABGGTB
DPH6
PI4KB
RPS12
SMC2
EIF4ENIF1
RBBP5
PSMD12
ZNF503
NBAS
UFM1
TMED1
HES1
SELENOF
HS2ST1
MRPS5
MALRD1
ICE1
FAM104A
C17orf80
USP1
RBKS
BABAM2
UBE2I
OSGEP
APEX1
KDM8
INSM1
BNIP3
NFKBIL1
DDX39B
ATP6V1G2
ATOH1
PAF1
MED29
TM9SF1
C16orf91
PROSER1
NHLRC3
PRDM12
NEK3
DCTN3
ARID3C
PIN4
DUX4
PTGES2
HOXA4
APOM
BAG6
FGF19
RPS29
LRR1
TAF9
RAD17
AK6
OR6B2
NDUFA10
BICRA
CR1L
NUTM2D
ERRFI1
DBX1
TPM1
ANK2
TMEM120B
MYLK4
BFSP1
TLE4
TESC
EVA1A
RBBP7
ARHGAP11A-SCG5
ARHGAP11A
CCN1
PRRX1
TRABD2B
MRTO4
EMC1
ADAM18
ZP4
SULF1
LZTS1
SYBU
SUCLG1
FRG2C
RAI14
SOX21
ID2
SEC22B
SEMA6D
KDM2B
KIF26A
COMMD1
CCT4
PMAIP1
EIF2S3
SLC7A5
TMEM107
TPRA1
HOXB3
HOXB4
PDHB
GTF3C4
DDX31
LRIG1
HOXB1
RGS12
GADD45GIP1
DMRT3
STK36
RNF25
DTX4
RASL10B
CNPY2
SPACA1
RPL7
RDH10
SEC11C
NEUROD1
HNF1A
DDX3X
CAMTA1
TMEM14A
HOXD3
LRATD2
SMPDL3A
PCBD2
ANKLE2
CCDC33
TBX3
DLX4
DSCAML1
MEIS2
C12orf73
GPR176
CLDN2
PCDH11Y
PAX6
DLL4
GFRA3
PHOX2B
RPN1
TPST2
FOXP2
SLC10A2
PHC2
WDR59
HSPB8
CACNA1D
ZNF383
DMBX1
MYO10
SKIL
ID1
PDZRN3
SALL1
METTL24
BAIAP2
NEUROG1
CEP41
PRUNE2
KIF21B
PDHX
APIP
OAZ3
ZNF367
PAX3
MXI1
PANK4
HES5
REV3L
GTF3A
ZFX
ABLIM3
FOXD3
CDC73
PDPN
HHIP
LPIN1
PAX8
VOPP1
ZFHX4
ENO1
CPSF4L
CLEC18C
ALKBH5
ZDHHC1
KLF17
CNTN4
DAPL1
NOXO1
GFER
PLEKHA5
RGL1
MSX1
LRIG3
TNC
ADGRL2
OCLN
ASXL3
NEDD9
GAD2
GORAB
FSTL1
LHX2
FAM107A
CLGN
DHX32
METTL11B
FBLN1
PDE6B
CNTN1
TBC1D8
PNKD
GFRA1
OR8J1
GADD45G
UPF3A
CDC42EP2
LIN28B
PKNOX2
CDH16
GATA3
GCSAM
OTX1
EPHA5
ARHGEF28
BRWD1
HNRNPA2B1
CBX3
AXDND1
SOCS3
HSPA1B
ZGPAT
ARFRP1
HOXA3
SALL4
TMPPE
GLB1
RPS10-NUDT3
RPS10
TIGD1
EIF4E2
JAKMIP1
HOXC5
LIX1
MEIS3
ABCG2
MEOX1
PPP2R5A
ST18
TYRO3
FAM120B
DLL1
PDE12
CATSPERG
VCAN
DNMBP
B3GALT5
DAAM1
TLE1
ZBTB25
ZBTB1
FGFR2
ZNF746
KAZALD1
NRG2
TLE3
HOXC4
STRA6
RPS24
POLR3A
ELMOD2
FJX1
CA14
PDE1B
MEF2C
MYRIP
VSTM2L
ZNF608
EIF4E3
DHRS3
TRIM71
RUNX1T1
ATOH8
OR5A2
SYNPO
YAP1
HOXB8
HOXB7
MAB21L2
LIPG
TLE2
STXBP5L
ZNF341
NNMT
NR2F1
CDK14
GPR82
RARA
TAGLN3
TCF4
DRD2
CEMP1
NXPH2
XIAP
CNKSR3
RAN
MUSTN1
ITIH4
ATP6V1B1
NRARP
CS
PLAGL1
TANC1
KMT2A
ECM1
FRRS1L
LRGUK
POP5
ZFHX3
CER1
FABP5
BAZ2B
TTYH1
FHL1
PIGR
CBY2
RYBP
WBP1L
ME2
TRAP1
PCDH18
SLC22A2
SLC39A6
ELP2
USH1C
ALDH1A2
MTMR7
OTOL1
LIG3
CYP51A1
MRPL38
ZCWPW1
MEPCE
CSN3
EIF2S1
ATP6V1D
CRABP2
RCOR3
NELFA
CPLX1
LIN28A
HNRNPD
ARMC12
CCDC88C
AJUBA
TIAM1
LRRN1
LOC150051
SPCS1
GLT8D1
IGFN1
CYP26A1
LRRC10B
SYTL2
LDLRAD3
KRT20
REC8
FAM124A
MSX2
IFI16
CCDC200
ALOX5AP
TMCC3
FRG2
PAX7
SLC14A1
ARHGAP24
CACNA1S
NFE2
ZSWIM6
KEAP1
SIK1B
SIK1
BMPR1B
ANTKMT
METRN
BTF3
POU3F1
STOML2
HOXA2
COX5A
POU2F1
TFDP2
ABCB5
DNMT3B
ATF3
UPP2
ITPRIP
CHD8
CLEC18B
TNFRSF19
PPBP
TEX46
KDM1A
GJA1
RARB
EIF4H
LINGO1
ZMAT4
CATSPERB
PJA2
TMEFF2
BAMBI
FGFR4
TPO
RBP3
CNN3
PERP
TMEM70
ELOC
SRSF11
LRRC40
NR6A1
FOXO3
ARL4C
CRKL
HOXC6
TRDMT1
TP53INP1
PLEKHA6
C1orf141
ADM
TBL1XR1
CPVL
CHN2
RCOR1
SP8
ADAMTS15
RBPJ
DGKZ
SMC6
GEN1
ARSF
HRK
CCDC169-SOHLH2
CCDC169
RBM20
FOXB1
MECOM
ARHGEF4
IGFBP6
SOAT2
NCOR2
QPRT
NPAS1
SEMA5B
NEBL
IPO11
LRRC15
LRP2
TSPAN13
N4BP3
PTGR1
SNX1
CIAO2A
PEX2
TTLL6
SPRY1
DICER1
CCDC198
RHOB
PPP1R12B
ERCC1
ACBD5
TRIM2
HEY1
PLPPR1
SKOR1
CCDC107
TRAF3IP2
TAS2R41
NKX2-8
SH2B1
HECTD3
DST
RXRB
HSD17B8
SLC39A7
RING1
GIGYF1
WWC2
WDR74
ZNF775
PCBP4
ABAT
OR52E2
CA4
ALPK3
ACOT6
BBS9
PIMREG
ATP5MC2
FLRT3
AIPL1
DUSP6
LRRC8C
ATXN7
ONECUT2
SOX11
CLEC19A
PKDCC
GPC6
GDF10
GPR15
SERPING1
ZNF853
GALNTL5
TCF7L2
SRGAP3
PANK2
BCO1
C21orf62
NKIRAS1
NR1D2
PIPOX
DRAP1
C11orf68
CCDC43
PACSIN2
USP17L20
USP17L22
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXB5
MSI2
FBXO10
SPOCK2
LMO4
TLN1
CREB3
CFAP69
SLAMF8
TCHP
NEUROD4
CDX1
KMT2B
RFFL
VXN
ID3
ARHGEF1
CALHM6
NXPH4
P2RX6
PRRC2C
NEGR1
VWA1
SNCG
MMRN2
ADAMTS10
LYPD6B
ELMO1
PTCH2
SPTBN1
KCNN2
ZNF878
FOXP1
DTNB
RPH3A
GPR157
MTF2
SOX6
NEDD4L
GJA3
GYPC
NRXN1
ZNF593
C1orf232
FLVCR1
NCK1
ZNF891
ZNF10
WRAP53
TP53
USP17L11
USP17L18
USP17L21
USP17L12
NR2F6
COL5A2
FGFRL1
TNP2
PRM3
SERPINA6
PRDM13
COL11A2
IDUA
TGM3
KAT6B
IRF2BPL
PRKCA
ACCS
EPB41L5
TPST1
AGPAT4
PYGM
SIRT4
TTR
ROBO3
RGS3
DPF3
C1orf127
KRTAP12-1
ELOVL6
CENPBD1
MDN1
IKZF4
FAM181A
NR5A2
SLC39A4
CPSF1
NCALD
EFNB1
ACSM6
KRT9
TTYH2
NEO1
PPP1R3D
FAM217B
IRS2
CCN2
VEPH1
LMX1A
GBX1
SCARB1
PAX4
LRP4
LIMK2
HOXA6
DUSP2
ENTPD4
HOXA1
CETN1
SCN2A
SPON1
LPAR3
G0S2
ABHD11
SND1
CSTF2T
FERD3L
ACVR1
MAD2L2
DRAXIN
ASIP
H3C12
H2BC17
H2AC17
CSNK1A1
NPAS4
TRMT9B
KIAA1958
C9orf147
GCK
NCOA2
C10orf90
KAZN
SSUH2
ZNF436
H3-3A
PTPRZ1
DLC1
CASC3
SOX12
TXNIP
RBMS3
POLR1D
LNX2
TMEM132C
NDRG4
KDM3A
BRI3
CMTR1
CEP63
ANAPC13
ZFAND4
RXYLT1
ELAPOR2
PRTG
NDUFS7
DENND1A
UBE2QL1
NCAM1
KLB
RIN2
SPIN1
NPTX2
MGST1
HOXA9
HOXA7
RTN1
C12orf42
BMP5
FGD4
USP10
DDO
FHDC1
DYRK1B
MTRNR2L1
CDIP1
TANGO6
HDAC9
RPS7
ZIC5
BCAT2
ZBTB2
LZTFL1
MBNL3
TMEM47
LNX1
KCNJ13
RBM25
TBC1D16
WARS2
VANGL2
HOXB2
SLC44A3
NR4A3
PDGFA
HES4
ETV5
PAH
ASCL1
SELENOP
SCGB1D1
USP17L15
MXRA7
NUP93
ETV1
HABP4
SP5
TTI2
NBPF9
ZNF587
SUN1
LAPTM4A
GPC4
FAM71A
MBD2
DGAT2
WT1
FLNB
RAX
CENPS-CORT
CENPS
AGO1
KDM4C
SASH1
SOST
SPHK2
RPL18
FAM83E
MPZL2
CELSR3
TOX3
PER2
RIMBP2
DLG2
NEMP2
TPCN1
PHACTR2
TUBB3
AKIRIN1
DONSON
MFSD3
GPT
TBPL1
BMP7
TMEM63B
MRPL14
DLGAP1
CDK15
GAS7
SGK3
GRWD1
WDR47
EMID1
SULF2
SCUBE2
POLR2J3
PEX14
DFFA
GATD3B
GATD3A
HOXD1
CRB2
GPRC6A
GCSH
NFIX
JAG2
NUDT1
IP6K3
TRIM54
SLC30A3
DNAJC5G
TRIM41
C8A
TPPP3
RAPGEF4
PRTFDC1
UTRN
PLXNA2
SHOX2
RSRC1
RNF138
CXCL6
CD69
FAM162A
CCDC58
NOTCH1
PLXNB1
DMD
GUK1
PIAS1
RASL11B
HMX3
GNAI2
STON1-GTF2A1L
SERPINH1
RDX
ZNF423
NAALAD2
CD248
ZSWIM2
KAT6A
CBX5
SECISBP2L
LMNA
MEX3A
SDSL
LTV1
NDUFB3
FAM126B
NAT10
GAS2L3
CCNO
SEMA4B
PODXL
LIMCH1
MAML3
ZIC4
ZIC1
PRSS47
EMP1
UTS2
UBR5
ASPH
GGA1
C15orf61
KCNJ9
SOX5
PTAR1
MYH3
JDP2
CLASP2
GAS1
ANKRD6
ELAVL4
CNN2
CTBP2
HHIPL2
WFIKKN1
CLUL1
ZNF831
KLHL15
LEFTY2
CDCA7L
ARID3B
GATA4
TRIP10
GPR108
MTRNR2L2
MSH3
DHFR
GRSF1
ARSG
RASSF2
MRPL34
ABHD8
IER3
FLOT1
FGR
PLEKHO2