ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◣ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
MAPKAPK5
ZNF335
PSMD1
CACTIN
ZNF503
DYNC1LI2
NME6
POLR3F
DZANK1
RWDD1
TAOK3
SUDS3
VTI1B
PSMG2
CEP76
IPO13
NUP85
FAM187A
EFTUD2
CCDC103
VDAC2
NVL
GATA4
STAM2
HOXA2
LYRM4
FARS2
SKP1
HSPA9
NCLN
GOSR2
TBCK
AIMP1
UBXN10
UPF2
DCTN1
SRD5A1
NSUN2
POLR2E
NUP205
ATP5MG
IMPG1
IFI16
TSN
REXO1
DUX4
EXOSC5
BCKDHA
COX7A2L
MRPS7
GGA3
SEC61B
FRG2C
BLCAP
C19orf48
STAM
MRPS5
TSNAX
ACTR10
ICE1
NTRK2
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
SUPV3L1
HADHB
HADHA
BBS9
PES1
FAM104A
C17orf80
HOXB3
HOXB5
PI4KB
HAND1
PAK1IP1
C6orf52
EIF4ENIF1
RABGGTB
USP1
MECOM
ZRANB2
ZNF576
IRGQ
ETFBKMT
XPNPEP3
ST13
RBKS
BABAM2
ADK
AP3M1
UBE2I
SMC2
ANAPC7
CELF4
SCRG1
UFM1
RPS23
ATP6AP1L
TM9SF1
ADAM18
LAPTM4B
DPH6
RPS12
RUNX1T1
IQCG
RPL35A
LRRN4
CAPRIN1
ERI3
NDUFA4
SF3B3
COG4
SART3
ISCU
PCBP1
PAF1
MED29
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
NFKBIL1
DDX39B
ATP6V1G2
RBBP5
SUCLG1
CLGN
MRPL11
TMED1
RPS27A
CLHC1
NEO1
OSGEP
APEX1
OR6B2
NDUFA10
SIRT4
APOM
BAG6
TBX3
NR2F1
COMMD1
CCT4
OAZ3
DMD
HOXC4
HOXC6
VPS13A
OBP2A
CITED2
CCN1
DMAC1
ELOVL6
HEXIM2
KDM2B
HOXA4
HOXA3
PTGES2
PDE12
CD244
UNC5C
RARB
BICRA
NTAQ1
MRTO4
EMC1
SHOX2
RSRC1
PRXL2A
ANKLE2
HES1
LIN28A
MEIS1
PDAP1
BUD31
NDUFV2
ZAP70
LZTS1
PLEKHF1
STK36
RNF25
TMEM141
EIF2S3
PRUNE2
PLAGL1
TLE3
DIAPH3
NUBP1
MELK
CXXC4
TMEM120B
KRTAP23-1
PDE6B
CPA1
DCTN3
ARID3C
RPL7
RDH10
ZNF608
PIN4
CYP26A1
FAM205A
ZFHX4
SNCG
MMRN2
MGST1
METTL24
SKIL
SLC19A2
WT1
SSH1
TAF9
RAD17
AK6
TPM1
RARA
TTI2
EMP1
P2RX6
FRG2
CNR1
NXPH2
ASPG
ADAMTS8
ZNF3
COPS6
ACKR3
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
HIP1
ID2
MRTFB
ERVW-1
PAEP
FLVCR1
FOXP2
SEH1L
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
MEOX1
TMEM14B
ZGPAT
ARFRP1
CATSPERG
PACRGL
PGPEP1L
LIX1
KIAA1217
RPN1
POP5
USP34
ZNF587B
LRIG3
LYPD1
GADD45A
SOX5
SEPTIN9
NEMP2
CCDC200
GC
FGF7
PLCH2
CNPY2
PKDCC
RPS24
POLR3A
SPTBN1
HOXB8
HOXB7
GOLGA8K
TMEM107
BNC2
TUBB
SCMH1
MDC1
PPP1R3D
FAM217B
SH3RF2
ACVR1
TNP1
RBPJ
NDUFS7
HOXC5
EIF3D
CCDC183
CFLAR
PEDS1-UBE2V1
PEDS1
POLR2D
KDM3A
CYP51A1
PCDH18
GABRB2
SERINC3
RPS29
LRR1
SLC48A1
KRTAP13-1
DSCAML1
ZBTB18
TXNRD1
GADD45GIP1
HOXA6
HOXA5
PCDH15
SPRR2F
TLE4
CCDC174
SMAD3
ITGA3
SACM1L
FBXO34
CNTN1
SALL4
AKAP12
RND3
ABCC9
ZFHX3
PKNOX1
POLDIP3
SVOPL
SEC11C
TMEM14A
NAGLU
ADRB3
FEM1B
EVPL
METTL25
CCDC59
TMSB4Y
KANK1
ZSWIM6
FZD8
POU2F1
CBFA2T2
SH2B1
NBAS
MYPN
FAM72D
FAM72C
AQP1
H2BC5
H1-4
GOLGA8H
PDZRN3
AKAP13
TCF7L2
EYA1
ERCC1
CDC42EP3
SLC22A5
CDIN1
VANGL2
GPR82
SIPA1L1
ZNF383
GORAB
REC8
ECHDC1
CAPN7
NPM3
FGF8
RAPGEF4
HERC6
TBX18
SVEP1
IGF2BP3
SNX16
C9orf153
GTF3C4
DDX31
HUS1
PPP1R21
CDC73
RNASEH2B
CCN2
MPDZ
NELL2
SLCO2B1
BCL11B
GFRA3
SORBS2
SCHIP1
C1orf105
SPRY1
SFXN3
PDZD7
NNMT
PGF
MXD1
FOXP1
TRPS1
SPIRE1
HMX2
RBM20
C12orf29
MXRA7
OSBP2
GYPC
PFKFB3
NFIB
RCOR3
FSIP1
SLC7A7
ZNF341
UBA3
ARL6IP5
ZYX
FAM131B
HEY2
HMGCS2
ERCC4
ACY3
PDGFRA
NRG2
SIGLEC15
SCOC
PGK1
WDR82
CDK6
ASXL3
JCAD
TMCC3
MYLK3
R3HCC1L
ZNF430
ID3
TNFRSF19
KCTD7
GDPD5
ZP3
NT5C3A
GNGT1
HAPLN1
TMEM185A
USP17L20
USP17L22
RAB17
COPZ1
KIF4B
ZNF746
HNRNPD
GPSM3
OTUD4
PBX2
CDH18
RNF207
INPP4B
RERG
TYRP1
PDE6A
WDR74
ANKRD33B
CCDC175
ALKBH5
SLC7A5
IRS2
VTN
SARM1
RCOR1
SYNJ2BP-COX16
SYNJ2BP
VOPP1
MAD2L2
DRAXIN
GOLGA8T
CACYBP
THRA
ANXA11
FHL2
BNIP3
TCF4
MGST2
ABCA4
SALL3
PLA2G2E
DUSP6
SHB
SSBP3
CFAP69
CEP70
UBL4B
TRIP12
FBXO36
CD248
SLC9A3R1
ESRRG
CDK15
PCNX4
ZNF853
CDH3
WDFY3
NDUFB3
FAM126B
ENTPD4
ABLIM3
SERTAD2
ZNF280D
MID1
ACYP1
ZC2HC1C
MYOM2
PKP2
KRT8
KRT18
NR2F2
ZNF367
DLG2
CRKL
ELAPOR2
ZSCAN30
CS
MEGF6
ITGBL1
OLFML1
SLITRK6
ALPK2
PCBD2
CPPED1
DNAH12
HSPB3
MPPED2
WWP2
TNNT2
SPRED2
BNIP2
IL1RAPL1
PDHB
CLASP2
ATXN2L
RIPOR2
LIPC
DHRS3
CEP41
SNX8
SLC25A6
PLAAT2
MEIS3
PDCL3
CSRP1
C9orf92
HNRNPA2B1
CBX3
FNDC5
SUPT7L
SLC4A1AP
KAT6B
CELF2
UBE2H
QPRT
SLC28A3
CTF1
BCL7C
GRWD1
ADAMTS3
DIP2C
SSUH2
ELK4
RANBP17
GFRA1
RGS5
ARHGAP28
PAQR8
PMFBP1
DGKZ
SEC24A
GATA6
DNAJB4
ALX1
RASSF4
ART5
ART1
NEUROG2
NEUROG3
HES3
CDX2
VEZT
FGD6
PMAIP1
ARHGAP10
ZP4
ATOH1
NEUROG1
LBX1
IGFBP2
NEUROD1
INSM1
LEFTY2
DAPL1
IGFBP6
CDCA7L
PDHX
APIP
DLL4
C16orf91
PHOX2B
DLX4
ST18
CCDC33
SYBU
PRRX1
SEC22B
MSX1
MYLK4
TPRA1
SP5
ANK2
FGF19
NFE2
DNAJB7
LRATD2
SOAT2
ARID3B
TMEM70
RGS12
ELOC
MALRD1
MYRIP
MRPL38
SMPDL3A
RBBP7
GADD45G
TRIP10
GPR108
MTRNR2L2
MSH3
DHFR
GRSF1
ERRFI1
ARSG
KDM8
DMBX1
KAZALD1
MTRNR2L1
CR1L
TRABD2B
HOXB4
PRDM12
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MEIS2
KMT2A
RASSF2
PAX6
MSX2
BFSP1
MRPL34
ABHD8
EVA1A
LPIN1
IER3
FLOT1
NEK3
FGR
PLEKHO2
HOXB1
INAFM2
MBD2
TMPPE
GLB1
SPCS1
GLT8D1
CBX4
SPATC1L
DBX1
RNF149
SH3BP2
AXDND1
UPF3A
SULF1
HOXA1
LYL1
METTL11B
CACNA1D
KDM6B
GTF3A
PANK4
HES5
TESC
RPS10-NUDT3
RPS10
NELFA
HSPA1B
ARID5A
ABCG2
TLE1
KCNAB2
JAK3
ARHGAP24
STK38
NUTM2D
MRS2
PARK7
TIGD1
EIF4E2
CCPG1
C15orf65
ID1
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
RAI14
C12orf73
ATG16L2
KIF21B
HOXD3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NCOR2
GRHL3
PRDM10
PAX8
SLCO4C1
CCDC88A
SNX1
CIAO2A
TBC1D8
SPECC1
NADK
BRWD1
PHC2
KLF17
FGFRL1
BIN2
ENO1
OTX1
WDR6
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
FAM110A
ADM
NCOA2
REV3L
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
CAMTA1
PLEC
WNT10B
SNX3
POR
USP17L11
MEF2C
TRAF4
MEF2D
USP17L18
USP17L21
USP17L12
KMT2E
CABIN1
MXI1
SOX21
RASSF5
LPCAT3
MTRNR2L8
LNPEP
RARG
SPG7
CPSF4L
LIG3
DDX3X
DENND2D
PPP1R18
IQCH
AAGAB
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
ATP23
ZNF718
ZNF595
CMTR1
PNKD
PCNA
POLR2J3
SYNPO
IQGAP2
SPACA1
LRIG1
ING1
CLDN2
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
CNOT2
SLC9A1
OTUD7B
FTL
PDPN
RXRA
GALNT10
PKN2
NDFIP2
MAPKAPK3
PLCB2
RYBP
USP3
CDX1
ADCY7
TRIM48
NKIRAS1
MUC12
PEX14
DFFA
MOBP
FAM120B
ARHGAP4
YTHDF2
SMARCD2
PKM
IFRD2
PCTP
PRDM1
HESX1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
NR1D2
ADORA2A
COL23A1
RNF166
CYCS
RNF139
RAB11B
ANKRD1
SH3TC1
DYNLL1
SP7
CNTN4
ZDHHC4
BAIAP2
HMGCS1
ARIH2
CBWD5
CBWD3
LTBR
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
ARID2
ZNF740
CSAD
SOD2
KCTD6
SEMA6D
CPT1A
DTX4
IL6R
PRSS56
AKIRIN1
KIF26A
SLC35E2A
ZFX
ABHD11
KANSL3
FER1L5
CYTH4
MYEOV
PDE4D
LRGUK
PTGES3
FOS
AGO1
PCDH11Y
NR2C1
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
SRPRA
RBL2
HHIP
HNF1A
NXPH4
FCHSD2
SSX2IP
DMRT3
CTTN
PXYLP1
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TRMT6
MCM8
ADGRL2
SLC39A13
CSRNP1
BAZ1B
SLAMF8
CALM2
ANKRD13D
TPST2
DTNB
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
SEMA4D
TSPAN16
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
GATD3B
GATD3A
FAM89B
EHBP1L1
CLTC
RFESD
CDC42EP2
ZNF25
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
SYNJ2
KCNH2
SLC10A2
IL21R
STX18
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
LYPD6B
ERLIN2
RASGRP2
ARHGEF1
PEAK3
MRPS31
COX5A
RAD50
MIDN
MAP1S
EPM2A