ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◣ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
PSMD1
NME6
IPO13
ZNF335
NCLN
DYNC1LI2
CACTIN
TAOK3
SUDS3
RWDD1
NUP85
NEUROG2
VDAC2
POLR2E
VTI1B
MRPS7
GGA3
PSMG2
CEP76
HSPA9
NUP205
TSN
FAM187A
EFTUD2
CCDC103
TBCK
AIMP1
GOSR2
NVL
REXO1
DCTN1
TSNAX
RPL21
STAM2
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
PES1
SEC61B
C19orf48
CAPRIN1
STAM
BLCAP
SRD5A1
NSUN2
PNO1
RBBP5
SLC35B1
UPF2
LYRM4
FARS2
FARSB
ACTR10
ATP5MG
NEUROG3
PCBP1
NDUFA4
PAK1IP1
C6orf52
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
LBX1
ANAPC7
PI4KB
SART3
ISCU
UFM1
PDAP1
BUD31
MRPS5
ICE1
FRG2C
IQCG
RPL35A
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
MRPL11
RABGGTB
ADK
AP3M1
RBKS
BABAM2
DUX4
USP1
PROSER1
NHLRC3
SMC2
FAM104A
C17orf80
EIF4ENIF1
OSGEP
APEX1
XPNPEP3
ST13
RPS12
RPS27A
CLHC1
BICRA
PAF1
MED29
HES3
ZNF503
UBE2I
COMMD1
CCT4
TM9SF1
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
NBAS
MRTO4
EMC1
ARHGAP11A-SCG5
ARHGAP11A
ATOH1
FZD8
DCTN3
ARID3C
PIN4
APOM
BAG6
RPS29
LRR1
RBBP7
GTF3C4
DDX31
NEUROD1
INSM1
NFKBIL1
DDX39B
ATP6V1G2
C16orf91
RPN1
ARHGAP10
ARHGEF1
FRG2
SUCLG1
CDC73
NEUROG1
CCDC33
OAZ3
EIF2S3
ANKLE2
TAF9
RAD17
AK6
PMAIP1
SKIL
TPM1
ADAM18
CDX2
SEC11C
RPL7
RDH10
PCBD2
PDHX
APIP
GADD45GIP1
CR1L
LPIN1
PRUNE2
CCDC200
ZGPAT
ARFRP1
EVA1A
ZP4
STK36
RNF25
PRDM12
ALKBH5
IGFBP2
PTGES2
DLX4
ZNF383
KDM8
SRSF11
LRRC40
CNPY2
TLE2
ANK2
PDHB
NOXO1
GFER
DBX1
FGF19
SH2B1
AXDND1
RYBP
GORAB
TMEM70
ELOC
LRATD2
ECM1
ERRFI1
KIF26A
CCN1
KIF21B
SEC22B
WDR59
TRABD2B
HOXB1
CLDN2
PDE12
MYLK4
EIF4H
TEX46
KDM1A
NELFA
SLC7A5
RBPJ
DMBX1
SULF1
MEIS2
RGS12
CASC3
DLL4
PRRX1
BFSP1
DTX4
CLEC18C
MYRIP
KDM2B
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
HSPA1B
LRGUK
MALRD1
TBC1D8
TMEM120B
RAI14
PDE6B
JAKMIP1
SYNPO
DDX3X
TPRA1
BRWD1
TLE4
NUTM2D
CLGN
ZNF746
GFRA3
ZCWPW1
MEPCE
NRDE2
CDIP1
HOXB3
HOXB4
ID1
TESC
TIGD1
EIF4E2
IGFBP6
SOAT2
POP5
DGKZ
HOXA4
MRPL38
ARL14EP
GTF3A
NRXN1
SLC7A6OS
PRMT7
HOXD3
CNTLN
C12orf73
CS
PCBP2
SPHK2
RPL18
FAM83E
SMPDL3A
SLC10A2
SYBU
GATA3
ZFHX3
PAX8
PNKD
DAPL1
FOXP2
SOX21
TRIM41
VOPP1
LRIG1
ZNF341
USP17L20
USP17L22
RNF138
GADD45G
RPS10-NUDT3
RPS10
NCBP3
DMRT3
CCDC43
RNF32
ADGRL2
NEUROD4
MFSD3
GPT
ERCC1
WDR47
SFT2D2
RPS26
CPVL
CHN2
B3GALT5
ACBD6
MXI1
GAD2
SKOR1
NPAS4
SRRM3
CALHM6
RASL10B
ZNF292
CATSPERG
BAIAP2
SLC39A6
ELP2
DUSP2
DAAM1
MUSTN1
ITIH4
PKNOX2
TCHP
E2F6
CDH16
TPST2
RARA
HNF1A
CHD8
OR8J1
AP1B1
CPLX1
CNN3
C12orf42
SPACA1
TMEM107
HNRNPA2B1
CBX3
CDC42EP2
VANGL2
DNAJB2
SALL1
CLEC18B
ID2
MYO10
CAMTA1
CDX1
EVI5
RUNX1T1
HHIP
SGK3
MSX2
KMT2A
PEX2
DHX32
SEMA4B
HNRNPD
ZNF891
ZNF10
LRP2
TRDMT1
RHBDD1
RCOR1
ITPRIP
KAT6A
TUBB3
PLXNB1
RGL1
POLR2J3
MET
FTCDNL1
SEMA6D
TBC1D15
ZNF367
NEK3
USP17L11
USP17L18
USP17L21
USP17L12
USP17L15
YAP1
WDR74
HOXA2
LEFTY2
RARB
CDCA7L
HOXA3
PHOX2B
ST18
LZTS1
ID3
MSX1
DUSP6
SP5
NFE2
DNAJB7
ARID3B
GATA4
CNTN1
TRIP10
GPR108
DSCAML1
TLE3
MTRNR2L2
MSH3
DHFR
GRSF1
NR2F1
ARSG
METTL24
KAZALD1
MTRNR2L1
FOXP1
HOXC4
TBX3
CYP26A1
ZFHX4
RASSF2
PAX6
MRPL34
ABHD8
HOXC5
IER3
FLOT1
NDUFS7
FGR
PKDCC
IFI16
TCF7L2
PLEKHO2
INAFM2
MBD2
TMPPE
GLB1
CBX4
SPATC1L
RNF149
SH3BP2
UPF3A
HOXA1
ABLIM3
LYL1
METTL11B
CACNA1D
ZNF608
HUS1
DHRS3
HEXIM2
KDM6B
ETFBKMT
TMEM14A
PANK4
HES5
LIN28A
ARID5A
CITED2
ABCG2
NEO1
TLE1
KCNAB2
JAK3
ARHGAP24
STK38
MRS2
PARK7
CCPG1
C15orf65
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
FRAT2
C11orf24
SASH3
PDZRN3
KAT6B
ATG16L2
HOXC6
RPS24
POLR3A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
NCOR2
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
CCDC88A
SNX1
CIAO2A
SPECC1
ARHGEF10L
NADK
PHC2
SNCG
MMRN2
KLF17
PLAGL1
FGFRL1
BIN2
ENO1
OTX1
WDR6
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
FAM110A
ADM
NCOA2
REV3L
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
PLEC
WNT10B
SNX3
POR
LRRN4
MEF2C
TRAF4
ZSWIM6
MEF2D
KMT2E
CABIN1
RASSF5
LPCAT3
MTRNR2L8
LNPEP
RARG
IMPG1
SPG7
CPSF4L
LIG3
DENND2D
PPP1R18
CDC42EP3
SHOX2
RSRC1
CCDC174
DIAPH3
IQCH
AAGAB
REC8
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
LRIG3
ATP23
ZNF718
ZNF595
CMTR1
PCNA
TUBB
IQGAP2
MEOX1
TYRO3
NTRK2
ING1
RNASEH2B
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
CNOT2
SLC9A1
SIRT4
OTUD7B
FTL
PDPN
RXRA
GALNT10
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
USP3
ADCY7
TRIM48
SHB
NKIRAS1
TXNRD1
MUC12
PEX14
DFFA
MOBP
FAM120B
ARHGAP4
CYP51A1
YTHDF2
SMARCD2
PKM
IFRD2
PCTP
PRDM1
HESX1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
NR1D2
ADORA2A
COL23A1
RNF166
CYCS
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
SP7
CNTN4
ZDHHC4
CEP41
HMGCS1
ARIH2
MECOM
CBWD5
CBWD3
LTBR
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
ERI3
ZNF740
CSAD
SOD2
KCTD6
CPT1A
IL6R
PRSS56
AKIRIN1
SLC35E2A
ZFX
ABHD11
KANSL3
FER1L5
CYTH4
HOXB5
MYEOV
PDE4D
PTGES3
HAND1
FOS
AGO1
PCDH11Y
NR2C1
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
C12orf29
RND3
SRPRA
RBL2
NXPH4
FCHSD2
SSX2IP
CTTN
PXYLP1
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
SLAMF8
CALM2
ANKRD13D
DTNB
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
SEMA4D
TSPAN16
TTI2
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
GATD3B
GATD3A
FAM89B
EHBP1L1
CLTC
SEH1L
RFESD
ZNF25
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
SYNJ2
KCNH2
IL21R
CXXC4
ZNF3
STX18
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
LYPD6B
ERLIN2
RASGRP2
PEAK3
MRPS31
H2BC5
H1-4
COX5A
RAD50
MIDN
NAGLU
MAP1S
EPM2A
PDE1B
PKNOX1
ATP8B4
HSD17B8
ZBTB17
TTYH1
PSMD3
PIKFYVE
SPATA25
CTSA
HECTD3
BHLHE40
KRI1
CDKN2D
NR1D1
ARL4A
SBNO2
SDE2
FBXO41
RWDD2A
PGM3
MAPRE2
ARHGEF38
SMPD1
ZBTB25
ZBTB1
KEAP1
MAPKBP1
WT1
BCAT2
TNFRSF19
FMNL1
PRKCD
WTAP
CCDC88B
STRADA
NUBP1
TMEM123
CBWD6
MTF2
SLC22A2
SLC39A7
IFNGR1
ASNS
GRK6
MAGEF1
KRT20
MYCBP2
ZNF318
CPNE5
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
LSM5
AVL9
NIBAN3
USPL1
HMGB1
NTAQ1
MC1R
FXYD2
PANK2
UBL7
C1orf159
ATAD3B
SCMH1
H3C12
H2BC17
H2AC17
GPX4
MAST2
OR2L13
OR2AJ1
SACM1L
DYNLT1
NGRN
TCF4
SH3BGRL3
SALL4
MCU
HES7
BUD13
BNC2
TIGD5
EEF1D
DPEP1
SCAMP2
VPS37C
RUNX1
RNPEPL1
RER1
MORN1
CAPG
GRIP1
CISH
NIBAN2
DLG2
EOLA2
ZNF436
ARF3
GPSM3
GPATCH8
RPL17-C18orf32
RPL17
C18orf32
TAF12
NCBP2AS2
NCBP2
LGALS1
OST4
LIX1
ARHGAP27
YBX2
USP21
CYB5R4
GPR176
ARHGEF18
GABRB2
MRGBP
DONSON
DNAJB8
ATAD3A
CNOT6
KLHL25
KIF1C
INCA1
METTL25
FAM227B
DTWD1
DDX23
CCDC59
TDP2
DENND1A
CNPY3
ACOT13
RAP1GAP2
TMEM65
FABP5
YY1AP1
PTEN
KLLN
DAP3
C12orf65
HPF1
ADAM17
PGK1
MDC1
NINJ2
SCAF1
RRAS
MT2A
ACOT2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
GADD45A
UBE2L3
SPIN1
RIMBP3C
RIMBP3B
TSPAN4
POLR2L
SLC9A3R1
NUDT15
GOLIM4
CEP135
CCNL1
ASB1
NANP
PTP4A3
CACYBP
GSPT1
PTDSS1
MTERF3
SPTBN1
ARID1A
SERTAD2
GBX1
RNF130
UNK
EIF3D
MTMR1
CDS2
MFN2
EHD1
ATG5
HYLS1
POU2F1
GYPC
LTB4R
LTB4R2
CIDEB
TRAP1
C21orf91
ZNF219
LANCL2
FOXD3
RPLP1
RITA1
DDX54
APBB1IP
POLG