ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◣ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
IPO13
PSMG2
CEP76
POLR3F
DZANK1
CACTIN
VTI1B
FRG2C
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
NSUN2
POLR2E
RPL21
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
BBS9
GOSR2
VARS1
MRPS5
ZNF576
IRGQ
RARB
DUX4
UPF2
TSN
PSMD12
PAK1IP1
C6orf52
PDE6B
RPS23
ATP6AP1L
DPH6
ATP5MG
GOLGA5
DAPL1
C19orf48
CAPRIN1
EIF4ENIF1
IQCG
RPL35A
SMC2
SEC61B
PES1
TTC8
RBKS
BABAM2
IGFBP6
SOAT2
PI4KB
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
RBBP5
SUPV3L1
ACTR10
PNO1
TMED1
NDUFA4
USP1
ZRANB2
LYPD1
SART3
ISCU
PKDCC
RBPJ
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
MOBP
XPNPEP3
ST13
SLC22A2
UFM1
ZFHX3
RPS27A
CLHC1
FRG2
PROSER1
NHLRC3
MRPL11
SYBU
PCBP1
CLGN
CBX4
LTBR
SCNN1A
PTK2B
C12orf29
RPS12
ZGPAT
ARFRP1
ZNF608
LRRN4
NEO1
CDC42EP3
CYP26A1
CREB5
METTL24
SF3B3
COG4
PAF1
MED29
NSUN6
ARL5B
FOXP2
PXDNL
PDE12
TLE2
PTGES2
BARHL2
VANGL2
NR2F1
HEXIM2
HMGCS2
RBMS3
CITED2
APOM
BAG6
GATA4
GABRB2
MRTO4
EMC1
MYRIP
HEY2
SIRT4
GADD45GIP1
MBD2
OR6B2
NDUFA10
EIF2S3
SCMH1
ACOT2
MTRNR2L1
ST7
MSX2
SLC30A4
HBB
RPS29
LRR1
SUCLG1
CCDC200
BANP
ZNF383
DIAPH3
ZNF746
POP5
HES1
ARHGEF10L
LAMA3
ARHGEF38
CDC73
CABIN1
SKIL
SEMA3E
ST18
HMX2
TNK2
RPL7
RDH10
NFKBIL1
DDX39B
ATP6V1G2
DMBX1
BNIP3
TPM1
TMEM107
LAMB1
HOXC4
HOXC6
HOXA3
CACYBP
PDHX
APIP
KAT6B
LIN28A
MEOX1
RARA
FREM2
SEC11C
TBX2
ZBTB25
ZBTB1
TXNRD1
ANK3
TBC1D9
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
ZNF407
GORAB
PIN4
PCBD2
OAZ3
ZFHX4
HOXA1
SMAGP
FMN1
FOXP1
SERTAD2
MET
TTI2
PCDH15
CDS1
RPP25
MGP
PRUNE2
CNPY2
MKRN2OS
MKRN2
GTF3C4
DDX31
ARAP2
GTDC1
TMC7
CCDC33
EPM2A
ITGB8
SPCS1
GLT8D1
USP44
ALKBH5
IL20
ZNF367
CNR1
NDUFB3
FAM126B
FRRS1
SHOX2
RSRC1
CXXC4
ATOH1
TRIP10
GPR108
PDZRN3
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
SHMT2
SCML4
TAF9
RAD17
AK6
ETFBKMT
RPN1
LYPD6B
ANTKMT
METRN
GFRA1
AGO1
TNFRSF19
ZNF395
C6orf163
NLGN1
ABCB4
METTL25
CCDC59
MYZAP
GCOM1
KDM3A
PDE4DIP
OTUD7B
INKA2
SPAG17
RBM20
RARG
ASXL3
WDR74
DONSON
HOXB1
DHRS3
TIGD1
EIF4E2
TMEM70
ELOC
CLNK
SCAMP2
BNIP2
SPIN1
GEMIN2
ZNF341
KDM2B
TMEM106B
SALL3
PRTG
COL23A1
ID1
KRTAP23-1
SLITRK6
ZASP
SAP25
MRPL34
ABHD8
HOXA4
EIF3D
ACKR3
B3GNT5
MAPRE1
MEIS2
ABLIM3
SNCG
MMRN2
POGLUT3
PKIG
TFAP2B
SLC25A53
NDST3
RUNX1T1
DENR
SOX14
CFAP69
SCOC
STK36
RNF25
PEX14
DFFA
KMT2A
RPS24
POLR3A
PRDM10
TMPRSS11F
LIX1
MCU
REC8
RABGAP1L
SLAMF8
ARSF
GGA1
CTF1
BCL7C
UNC93A
ELOVL6
ATXN2
SLC25A6
ACOT1
SEMA6D
LMO1
ITGAV
NEFH
UBE2I
REL
BRWD1
SEPTIN2
HDLBP
RNF207
IPMK
CISD1
IGF2BP3
COX5A
OSGIN2
BCAT2
NELFA
KAT6A
FGD3
SFRP2
USP34
APLN
RGS8
KLRC3
C16orf91
NXPH4
EOMES
TCF7
PRKD1
STATH
KDM6B
ADM
SHB
ZNF827
LYPD6
GJA10
DCTN3
ARID3C
H2BC5
H1-4
CLDN9
TSPAN3
IL17B
CALM2
C1orf105
MIGA1
ZNF385B
ABI2
VPS33B
LOC389199
AFAP1
AP3D1
HUS1
YTHDF2
ADAMTSL4
SRSF11
LRRC40
LYN
CBWD5
CBWD3
TSHZ1
CRABP2
SMARCD2
MYADM
SIGLEC15
SVOPL
TRPM7
IGFBP2
PDHB
EBAG9
DNMBP
RBBP8NL
SPATC1L
SNX1
CIAO2A
KCNK2
HAPLN1
TPRA1
KRT8
KRT18
ILF3
CCDC174
PHIP
ZNF507
CS
ACYP1
ZC2HC1C
IMMP1L
ELP4
PDE4D
SLC7A7
BICDL2
PDCL3
LOC100287896
LIPT2
PXMP2
POLE
STX19
KANSL3
FER1L5
ATXN1L
ACY3
TACC1
ATXN7
PCLO
IFI16
SSBP2
HSPA4L
BEND7
ZBTB17
CLCN3
OTUD4
SYNJ2BP-COX16
SYNJ2BP
COQ5
RYR2
LMO4
DMAC1
UFSP1
UXS1
ACHE
SATB2
DUSP9
EIF4H
TMTC3
CEP290
TBX3
GADD45A
KCNC3
MGST1
CCN1
NR2C2
TANC2
HNRNPD
ZDHHC17
ACBD6
KANK1
RILPL1
ACTR3B
USP17L20
USP17L22
PRR13
CDKL2
FAM168B
FANCL
POU2F1
TMSB4Y
RPRM
TMPRSS12
SH2B1
HNRNPA2B1
CBX3
MTF2
UROS
BCCIP
VEPH1
CEP70
PRKAG2
SLC40A1
FGD5
TLE4
CYP51A1
TCHP
ESRRG
DLAT
NEUROG1
POLR2J3
ARSB
KCNH1
GTF2IRD2
LSM8
NRDE2
SORBS2
ZNF844
IMPA1
NCBP3
YEATS2
FZD8
MELTF
KLHL32
CNN2
KCNS3
CBWD6
CNOT10
SELENOS
PTGES3
TMPPE
GLB1
MEMO1
EML5
BCAS2
GOLIM4
GPRC5A
CCNC
JAK1
RASSF6
TCF4
BAG2
MTMR10
RTL6
TAF1A
PALLD
C2CD5
PCTP
PEX2
PRXL2A
KCNN2
PYDC5
GGH
STX18
MTMR2
MPP5
CHD7
EYA1
DIO2
CCDC102A
UBE2V2
HMGA1
SNX3
PXYLP1
EID2
ZBED9
GPR37
SPECC1
SPRR2F
EPHA6
ID3
PIP4K2B
ATXN7L2
RTN4IP1
QRSL1
NEUROG2
FOXJ3
SLC5A10
SULF1
USP12
IFT22
BAMBI
PLIN2
CMSS1
FILIP1L
FAM110A
COLEC12
PLEKHD1
NEK3
C6orf136
RAB11FIP2
CMTR1
ZNF384
ARHGEF5
CFAP46
CATSPERG
USP17L11
USP17L18
USP17L21
USP17L12
TPCN1
CAPZA2
TBC1D5
BCAP29
PLS1
RYBP
EFCAB2
OTOL1
LUZP2
TTK
FAM162A
CCDC58
ARL14EP
PHACTR2
SPP1
EXPH5
SCAP
VWA8
LRRTM4
PELI2
ZSCAN12
SBF2
RAI14
PPP1R13B
TXNDC11
SEMA4B
KMT5C
RPS3A
DRAM1
NTAN1
NUTM2E
EIF5
ERCC6L2
MRPS36
PIGU
WDR11
FDFT1
REV1
OR5A2
CEP41
RHOBTB1
HEBP2
SKAP2
PIK3R1
MANEA
FSTL3
ADH1C
ADAMTS7
C15orf61
SLC48A1
SMARCAD1
NR2C1
FNDC3A
CRKL
ANKRD36C
MGST2
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
HES3
CDX2
VEZT
FGD6
PMAIP1
ARHGAP10
ZP4
BICRA
LBX1
NEUROD1
INSM1
LEFTY2
HOXB3
NBAS
CDCA7L
ADAM18
DLL4
ANKLE2
PHOX2B
DLX4
LZTS1
TMEM120B
PRRX1
SEC22B
MSX1
DUSP6
MYLK4
SP5
ANK2
FGF19
NFE2
DNAJB7
LRATD2
ARID3B
RGS12
CNTN1
MALRD1
MRPL38
SMPDL3A
RBBP7
GADD45G
DSCAML1
TLE3
MTRNR2L2
MSH3
DHFR
GRSF1
ERRFI1
ARSG
KDM8
KAZALD1
CR1L
TRABD2B
HOXB4
PRDM12
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RASSF2
PAX6
BFSP1
EVA1A
HOXC5
LPIN1
IER3
FLOT1
FGR
TCF7L2
PLEKHO2
INAFM2
DBX1
RNF149
SH3BP2
AXDND1
UPF3A
LYL1
METTL11B
CACNA1D
VOPP1
GTF3A
TMEM14A
PANK4
HES5
TESC
HSPA1B
ARID5A
ABCG2
TLE1
KCNAB2
JAK3
ARHGAP24
STK38
NUTM2D
MRS2
PARK7
CCPG1
C15orf65
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
FRAT2
C11orf24
SASH3
C12orf73
ATG16L2
KIF21B
HOXD3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
NCOR2
GRHL3
PAX8
SLCO4C1
CCDC88A
SLC7A5
TBC1D8
NADK
ERCC1
PHC2
DGKZ
KLF17
PLAGL1
FGFRL1
BIN2
ENO1
OTX1
WDR6
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
NCOA2
REV3L
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
CAMTA1
PLEC
WNT10B
POR
MEF2C
TRAF4
ZSWIM6
MEF2D
KMT2E
MXI1
SOX21
RASSF5
LPCAT3
MTRNR2L8
LNPEP
IMPG1
SPG7
CPSF4L
LIG3
DDX3X
DENND2D
PPP1R18
IQCH
AAGAB
NFKBIA
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
LRIG3
ATP23
ZNF718
ZNF595
PNKD
PCNA
TUBB
SYNPO
IQGAP2
SPACA1
LRIG1
NTRK2
ING1
CLDN2
RNASEH2B
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
CNOT2
SLC9A1
FTL
PDPN
RXRA
GALNT10
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
USP3
CDX1
ADCY7
TRIM48
NKIRAS1
MUC12
FAM120B
ARHGAP4
PKM
IFRD2
PRDM1
HESX1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
NR1D2
ADORA2A
RNF166
CYCS
RNF139
RAB11B
ANKRD1
SH3TC1
DYNLL1
SP7
CNTN4
ZDHHC4
BAIAP2
HMGCS1
ARIH2
MECOM
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
ARID2
ERI3
ZNF740
CSAD
SOD2
KCTD6
CPT1A
DTX4
IL6R
PRSS56
AKIRIN1
KIF26A
SLC35E2A
ZFX
ABHD11
CYTH4
HOXB5
MYEOV
LRGUK
HAND1
FOS
PCDH11Y
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
RND3
SRPRA
RBL2
HHIP
HNF1A
FCHSD2
SSX2IP
DMRT3
CTTN
AHDC1
UPP1
SNAPC3
CD164
TRMT6