ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
MRPS28
ING1
PXYLP1
NDUFS7
CBX5
HNRNPA1
OTUD7B
RBKS
BABAM2
CNOT2
POLD2
ZBTB7C
RARG
GATD3B
GATD3A
SMARCD2
KANSL3
FER1L5
NFE2
MAMDC2
ZCCHC24
ZNF827
GPRC5A
ATXN1L
REEP6
PCSK4
WDR7
CLK1
TAF1A
PKN2
MRGBP
HORMAD1
DONSON
METTL3
TUBB
FTL
MTRNR2L2
MSH3
DHFR
RAE1
IER3
FLOT1
DYNLT1
SYTL3
ZFP36L1
ZGPAT
ARFRP1
CAPN1
KDM3A
WDR74
CCDC174
NANP
MBD2
LOC114841035
FKBP2
STX18
RASA4
MTRNR2L8
ASNSD1
ASDURF
MAMLD1
PDE6B
RASA4B
EIF5
MAML3
TRIP10
GPR108
KDM6B
CTF1
BCL7C
NR2C1
NUDT15
UQCR11
USP42
BACE2
MTRNR2L1
SKIDA1
IMPA1
ZNF395
RARA
C19orf12
LIPA
UROS
BCCIP
KLK10
PTGES3
HECTD4
TRIP12
FBXO36
USP1
CTBP2
FAAP24
CEP89
TRMT1L
SWT1
CLCN3
TMEM241
STAT2
APOF
BCL9L
ARHGEF35
PMPCB
ARHGEF5
MIGA1
DNAJC16
CASP9
DUS1L
RNASE4
ANG
CYB5R4
SNRPA
C19orf54
AZGP1
KRT15
DPH2
B4GALT2
ATP6V0B
PLEKHA8
FKBP14
MRPS31
ANKS1B
CFAP69
SLC29A2
PPP2R5A
PPP1R13B
FOXP1
INTS5
COL23A1
NCOA7
TRABD
TEX264
MED9
USP37
CNOT9
RPL37
PDCL
NAGLU
CBR4
SMIM20
UQCRC2
FXYD3
RNF207
SREBF1
ABHD11
FAM78B
NCLN
FRG2C
BAZ1B
ALDOA
SEPTIN2
HDLBP
TSPAN10
NPLOC4
KMT5A
SLC25A16
FKBPL
ATF6B
DRG1
SZT2
MED8
SERTAD2
LOC105378979
GMNN
PSMB4
IGFBP6
SOAT2
CDC42SE2
METTL25
CCDC59
COLEC11
RASAL1
RNF121
LOC100133315
TRIM48
ZSWIM8
CHCHD1
TECPR1
MELTF
GCN1
SENP8
MYO9A
ST8SIA6
NPNT
MINDY3
SH3YL1
ACP1
RNF220
RGPD2
RGPD1
SPATA25
CTSA
NEURL2
AARS2
MRPL54
APBA3
CAPNS1
ABCC10
TP53INP2
APOM
BAG6
SH2B1
ADAM17
ABHD3
NFIC
PARP9
DTX3L
PLA2G6
MTRNR2L9
AFF1
HBP1
COL27A1
SLC11A2
ROGDI
C12orf73
RPS3A
TNPO3
TDRD3
CCL28
SOD2
MYADM
WTAP
GDPGP1
CIB1
RPL5
KLHDC2
FDXACB1
C11orf1
TRIB1
SIPA1
MRPS16
DNAJC27
ATXN2
SCNM1
LYSMD1
MKRN3
PCCA
RIMS1
GPAA1
EXOSC4
TTK
SERPINI1
PDCD10
PCTP
KRI1
CDKN2D
RPS19
SEMA4G
DBP
SAMD12
SPIN1
KBTBD3
AASDHPPT
EPM2A
ENTPD5
BBOF1
ZNF133
FGF13
VARS1
NAA40
DCPS
TLR5
BRD2
NOTCH1
CDH11
TF
FABP5
MBD6
DDIT3
CGGBP1
C3orf38
ADH1C
SRPX2
PACSIN2
ACYP1
ZC2HC1C
CDC42EP1
CCDC200
RBM19
MUC3A
PSMB3
PCGF2
SULF2
SLC30A4
CEP70
SRCAP
LOC730183
TRIM17
TRIM54
SLC30A3
DNAJC5G
MINDY2
PTEN
KLLN
UBE2V2
TAF6L
SLC39A9
ERH
ARIH2
DHRS3
MDM2
SEC24C
DZIP3
CIP2A
ARID4A
ZNF746
DUSP4
CLK2
ZASP
SAP25
HDAC9
BCO2
LCN2
ZNF384
KAT6B
AP1B1
TRIM38
ZNF77
ETFRF1
CFAP94
TMED10
TMED5
CCDC18
NEPRO
SKIV2L
NELFE
ESRP1
DUX4
AP2M1
ABHD14B
ABHD14A-ACY1
ABHD14A
CD46
PRUNE1
MINDY1
ACSS3
STAM2
SNX12
SMPD2
PPIL6
KLHL24
TBC1D22A
KCNQ4
FDX1
KLF5
OTUD5
MIEN1
ANXA7
PSPN
ALKBH7
DPP9
URGCP
IFT22
URGCP-MRPS24
POMP
DNAH14
MACROH2A1
ZNF85
ERCC1
ZNF318
SCAP
DLG2
GBA
IGSF10
LEKR1
LSM8
HGH1
ECH1
SPATS1
ODF3L2
LETMD1
TXNDC11
SPAG16
GPATCH8
SLC25A35
IVNS1ABP
LARP1
ADA
SEC23A
OSGIN2
HNRNPA1L2
ARHGEF25
DTX3
SP2
LRRC1
RPS8
MRPS33
DYNLL1
SRSF9
CCDC102A
MAMSTR
PIM3
ZBTB20
TRIM26
INPP5K
AKTIP
GRK6
SNRNP35
DKC1
SYS1
ANAPC15
SMAGP
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ADM
SLC22A4
SLC25A53
RPL34
KBTBD2
KCTD9
CDCA2
MRPS36
POLDIP3
PRR3
GNL1
RAB3GAP2
ATP6V0E2
B4GALT6
TBC1D8B
LRRC61
ACTR3C
EPN1
CDHR2
RNGTT
CEP78
PHGDH
ESR2
CS
MCOLN1
CCDC71
CYP4F11
NFKBIA
LEO1
TP53INP1
TAOK3
SUDS3
ACBD3
TJP3
ZMIZ2
CXCR4
WWTR1
CNDP2
HEXIM1
ZXDC
ZNF492
ZNF446
CAND1
CLIP1
HIC1
ELOVL4
LUC7L2
IQANK1
FAM83H
FAM3C
EXD2
PRKD2
TRIM2
FSTL3
MAP4K5
ATL1
CSTA
C12orf65
NR6A1
KCNS3
OPTC
XRCC6
DESI1
UFD1
CDC45
SRSF2
MFSD11
TRAM1
PSMA3
QSER1
C16orf70
DNAJA2
KRT14
PAXBP1
FAM114A1
SEC61B
KMT5C
TMEM167B
PITX3
LOXL4
GBF1
MYL12B
ENOX2
IRF9
AXDND1
STK11
TMPRSS12
COX5A
MT2A
PCBP2
NEK2
NUDT17
PLBD2
SBNO1
CSTB
SCYL3
MED12L
PCDH1
CCDC120
PEX2
PRKACA
BAG2
MGAT1
FZD4
BBS9
ST3GAL4
CLK4
LMF1
SOX8
DDX1
RBM7
C11orf71
PNN
TRAPPC6B
MPZL2
TCF7L2
TMEM79
SMG5
PELI2
RNF10
AASDH
SLC3A2
CLUAP1
IRX3
TENT2
THAP7
SLC38A1
ZFP41
ZBTB44
ZNF563
OSBPL1A
ZNF22
DHX35
EPHA7
CALM2
SRSF3
ACADM
KCNN4
C2orf73
MRPL34
ABHD8
GOPC
CSF3R
SINHCAF
POLR2B
NOA1
RPS9
HMGN3
SIRT4
PLEKHG3
OSR1
LRRC59
MFSD8
ABHD18
BCKDK
CRNKL1
CFAP61
FMC1-LUC7L2
FMC1
P4HA1
PSMD14
DYRK2
RNF135
OR6B2
NDUFA10
CASD1
CLDN7
RAB11FIP2
LOC391322
SLC9C1
MADCAM1
DSG2
ADRM1
AGPAT3
SLC4A2
CDK5
TOE1
MUTYH
SIKE1
DNAH12
RNASE1
CDC14A
TPD52L2
ABHD16B
DNAJB1
ZDHHC3
EXOSC7
PRPSAP1
TECR
SLC30A7
EXTL2
LAMTOR5
KRIT1
ANKIB1
CD320
CLDN4
ZNF76
EEF1A1
OSER1
S1PR2
MRM1
UPK3BL2
ARHGEF33
NLRX1
CCDC9
MYOZ3
PPP1R10
MRPS18B
FRMD3
TAF2
SYCP2L
GCM2
ZNF891
ZNF10
SH2D3A
CALML5
FRG2
RNF168
DDX5
CEP95
SNRPF
ZNF69
CYB5A
HEXIM2
LTBR
MAPT
RND3
DTNB
RPL23
WARS2
RABL6
EFS
HUS1
UFSP1
ACHE
SHPRH
NADSYN1
DHCR7
WDR81
ENOSF1
LRRCC1
GPRIN2
GFM1
ZNF572
SYPL1
SQSTM1
DYM
COP1
C2CD4D
PRELID3B
BLVRB
SPTBN4
ZNF484
CCDC130
AMER1
ZBTB45
NUP85
PTBP1
ZBTB7B
POLRMT
HNRNPLL
HYAL1
OBP2B
TXNRD1
SEMA3E
ELP6
CTNNA1
DSC2
SNX3
PNKD
KLHL7
SRSF5
ADCK1
DCAF10
H1-0
CCDC38
AMDHD1
RASD2
EBAG9
BMI1
COMMD3-BMI1
COMMD3
SLC25A6
MTMR11
NEDD4L
TAF12
TKFC
DDB1
PPIL2
GSPT1
WDR43
HMG20B
STK32C
MDH1B
FASTKD2
NIBAN2
TEAD3
TMEM209
SSMEM1
PAK4
SRSF7
AQP5
NOD1
CRY2
DENND6A
GXYLT1
CDK13
SIK3
ANKRD50
THUMPD3
CYB5R2
DDT
DDTL
MARVELD3
HIBADH
RUFY1
MDP1
CHMP4A
POLR3B
GIT1
ANKRD13B
HES4
ZNF506
KHNYN
CBLN3
GOLT1A
PNISR
REL
UQCRH
LRRC41
HINT3
ZNF675
RFLNB
GSE1
MTFP1
CTR9
ACTG1
ITGB3BP
EFCAB7
CCDC88B
SIT1
FOXJ3
NDUFS6
MRPL36
GABPA
ATP5PF
PLPP2
DMAP1
C1GALT1
LOC100421372
HSPA14
CDNF
MAIP1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
RWDD1
DYNC1LI2
PSMG2
CEP76
VDAC2
HSPA9
FAM187A
EFTUD2
CCDC103
VTI1B
NVL
NUP205
RPL21
POLR2E
TBCK
AIMP1
GOSR2
MRPS7
GGA3
DCTN1
C19orf48
ATP5MG
EXOSC5
BCKDHA
REXO1
ZNF503
STAM
SRD5A1
NSUN2
HADHB
HADHA
SKP1
TSNAX
FARSB
BLCAP
TSN
LYRM4
FARS2
PES1
UPF2
ZNF576
IRGQ
SLC35B1
ACTR10
NDUFA4
PAK1IP1
C6orf52
PNO1
CAPRIN1
DPH6
TTC8
PSMD12
GOLGA5
COX7A2L
SUPV3L1
RBBP5
SART3
ISCU
RPS23
ATP6AP1L
TMED1
MRPS5
IQCG
ZRANB2
SMC2
PI4KB
ANAPC7
RPL35A
PDAP1
BUD31
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
MRPL11
NEUROG2
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
RPS12
PROSER1
NHLRC3
SF3B3
COG4
RPS27A
CLHC1
NEUROG3
OSGEP
APEX1
TM9SF1
PAF1
MED29
COMMD1
CCT4
HES1
HES3
NFKBIL1
DDX39B
ATP6V1G2
CDX2
PTGES2
UBE2I
RPS29
LRR1
PIN4
FZD8
VEZT
FGD6
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
PMAIP1
ARHGAP10
TAF9
RAD17
AK6
ZP4
SUCLG1
HOXA4
ATOH1
NEUROG1
EIF2S3
SEC11C
RPL7
RDH10
STK36
RNF25
BNIP3
BICRA
LBX1
IGFBP2
SKIL
GADD45GIP1
NEUROD1
OAZ3
ID2
HOXA2
INSM1
LEFTY2
TPM1
CNPY2
GTF3C4
DDX31
HOXB3
PCBD2
NBAS
DAPL1
CDCA7L
PDHX
APIP
HOXA3
CDC73
ADAM18
DCTN3
RPN1
DLL4
ANKLE2
ARID3C
C16orf91
PHOX2B
CCN1
DLX4
ST18
PDHB
LZTS1
TMEM120B
CCDC33
ZNF383
PRUNE2
SYBU
GORAB
ID3
PRRX1
SEC22B
MSX1
DUSP6
TLE4
MYLK4
TPRA1
FOXP2
SP5
RBPJ
ANK2
FGF19
DNAJB7
LRATD2
KDM2B
TMEM107
CLGN
ARID3B
GATA4
TMEM70
RGS12
ELOC
CNTN1
MALRD1
TLE2
MYRIP
ALKBH5
MRPL38
SMPDL3A
RBBP7
GADD45G
DSCAML1
TLE3
POP5
GRSF1
ERRFI1
NR2F1
ARSG
KDM8
DMBX1
METTL24
KAZALD1
RUNX1T1
CR1L
USP17L20
TRABD2B
HOXB4
USP17L22
PRDM12