ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039039 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◣ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
ZNF335
RABL2A
PSMD1
DYNC1LI2
PSMG2
CEP76
CACTIN
NME6
IPO13
POLR3F
DZANK1
MAPKAPK5
TAOK3
SUDS3
FAM187A
EFTUD2
CCDC103
NVL
NEUROG3
DPH6
VTI1B
NUP85
VDAC2
DCTN1
RPL21
C19orf48
NUP205
TBCK
AIMP1
HSPA9
NCLN
STAM
GOSR2
MRPS7
GGA3
TSNAX
RWDD1
POLR2E
SKP1
HADHB
HADHA
STAM2
CDX2
TTC8
SEC61B
PNO1
ZNF576
IRGQ
SLC35B1
ATP5MG
RPS23
ATP6AP1L
MRPS5
SRD5A1
NSUN2
ZNF503
PAK1IP1
C6orf52
SMC2
CDCA7L
BLCAP
UPF2
TSN
RBKS
BABAM2
VARS1
FARSB
CAPRIN1
PDAP1
BUD31
DLX4
NEUROD1
EIF4ENIF1
REXO1
SUPV3L1
PES1
COX7A2L
ACTR10
FRG2C
LYRM4
FARS2
EXOSC5
BCKDHA
TMED1
SELENOF
HS2ST1
GOLGA5
ZRANB2
FGFRL1
IQCG
RPL35A
FAM104A
C17orf80
USP1
TM9SF1
FZD8
PI4KB
PSMD12
RBBP5
MRS2
ICE1
ADK
AP3M1
NDUFA4
WDR6
RPS27A
CLHC1
PTGES2
INSM1
PAF1
MED29
COMMD1
CCT4
DLL4
VEZT
FGD6
NEUROG1
SART3
ISCU
MRPL11
RPS12
PDE6B
UFM1
RABGGTB
OSGEP
APEX1
XPNPEP3
ST13
DNAJB7
PCBP1
ANAPC7
ATOH1
DUX4
APOM
BAG6
PROSER1
NHLRC3
RAB11B
DNAJB8
DUSP6
NFKBIL1
DDX39B
ATP6V1G2
SF3B3
COG4
ST18
MYRIP
DAPL1
RBL2
SHB
HESX1
POP5
GALNT10
PIN4
FOXC1
HES1
FRAT2
STK36
RNF25
ID3
EIF2S3
TAF9
RAD17
AK6
RPS29
LRR1
FRG2
LEFTY2
LPIN1
ANKRD1
SEC11C
DENND1A
PMAIP1
PNPLA1
GBX1
ARHGAP11A-SCG5
ARHGAP11A
LIG3
GADD45GIP1
KLF17
SUCLG1
EHF
BNIP3
OR6B2
NDUFA10
CALM2
NXPH4
ZNF664-RFLNA
ZNF664
CCDC92
TPRA1
UBE2I
GADD45G
SKIL
CERKL
PAX8
RPL7
RDH10
SEC22B
TLE2
PCBD2
RBPJ
ZNF383
CCDC200
GATA4
NCOR2
MRTO4
EMC1
PDHX
APIP
TMEM70
ELOC
MSX2
ACOT2
MBNL2
NEUROG2
PHLDB2
AMOT
GORAB
HSPA1B
TIGD1
EIF4E2
MAL
GTF3C4
DDX31
DTNB
COCH
NKIRAS1
NR1D2
UPF3A
KDM6B
GJA10
ALKBH5
BMP7
HCRTR1
TMPPE
GLB1
MLH1
EPM2AIP1
TVP23C
RAB17
OTX2
ARHGEF38
CNPY2
HES3
SYBU
MYSM1
SLC22A24
RPN1
GSR
ZGPAT
ARFRP1
CDC73
RAD54L2
ZNF649
OAZ3
LYPD6B
AXDND1
PRUNE2
DMBX1
USP44
MBD2
APLN
ZNF592
HOXB1
BANP
C15orf61
HEY2
CPVL
CHN2
CCDC85A
TRIP10
GPR108
LDLRAD4
PKIB
SPCS1
GLT8D1
BICRA
ANKLE2
DSCAML1
SCAMP4
ADAT3
RAN
DUSP4
SRSF11
LRRC40
PLA1A
MACROH2A1
CABIN1
RPP25
STK38
USP17L20
USP17L11
USP17L18
USP17L21
USP17L12
FZD10
MEOX1
ZNF397
TFAP2A
CNTN4
INKA2
KIF21B
OPRL1
LKAAEAR1
PTCH1
USP17L22
NOG
HNRNPA2B1
CBX3
CLEC10A
GATA3
ELF3
BAMBI
RSPO4
MRPL38
ATP6V0A4
LYPD1
FOXP2
KCNK2
ZNF850
DDX3X
BCOR
PDE12
ZCWPW1
MEPCE
SNX1
CIAO2A
MTRNR2L1
TBC1D8
RPH3A
PCDHAC1
SLC40A1
RGSL1
CFAP126
HAND1
JAKMIP1
OLIG3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HNRNPD
RYBP
DIRAS1
ARHGAP28
CLDN15
LRMDA
HOXA3
GRHL2
METTL11B
PLEKHA5
NFE2
HIC2
ANXA9
LIN28A
NCOA2
NTAN1
RBBP8NL
NDUFV2
TYRO3
STRADA
MAST2
C6orf163
SOX14
HOXA1
TAS2R8
TAS2R7
TCHP
IGF2
USP17L15
PAH
ASCL1
SLC12A3
DLX6
RARA
ZFAND3
SLC16A12
CDS1
NFIC
MID1
RUNX1T1
SNX16
RNF32
CYP26A1
TMEM41B
CD101
PDCD2
CHPT1
ZNF746
VENTX
BTBD3
H3-3A
TMEM275
DCLRE1C
ACOT1
SGK1
TBL1XR1
YAP1
PXMP2
POLE
TVP23B
BTF3
KAZALD1
KLF6
C16orf91
NAGLU
LCOR
RIMS2
METTL24
CEMP1
ZNF436
ZNF853
TRAP1
OSCAR
NDUFA3
RBBP7
ZNF90
FOXF1
GALNT8
ZMIZ2
PCLO
ZFP37
KAT6B
FDFT1
CCDC33
ARL14EP
LIPK
PRDM12
PRDM10
TEX46
KDM1A
EIF4H
SLC25A6
LEF1
HOXB9
ZNF891
ZNF10
CXXC4
WDR74
MTCH2
EN1
OTX1
CD99L2
RIMS1
ZNF81
TMEM185A
TENT4B
PTPRE
RPS10-NUDT3
RPS10
SPIN1
FAM53B
KCNJ4
PTPRG
SP7
CHD8
CLDN9
CCDC169-SOHLH2
CCDC169
HINT1
NAV2
LIX1
STRA6
CENPBD1
PRSS8
CBX4
COL11A2
FANK1
FAM89A
STON1-GTF2A1L
WNT3
CCDC88C
PODXL
OTP
APBB1IP
FAM24B
PAX7
FAM120B
DLL1
AGO1
TRIM45
GOLM1
SUCLG2
MACROD2
ORMDL3
ERI1
FTL
TXNRD2
COMT
ALDH3A2
PLAGL1
GYG2
GNG4
CNOT2
BCAT2
UPK2
NELFA
PRSS47
SHBG
FXR2
GC
PKNOX1
SEMA3C
CDX1
DUSP12
RASL10B
YTHDF2
KIF26A
BTG1
EVC
EVC2
DHRS3
ZNF552
ZNF296
GEMIN7
SH2B1
NFAM1
ZFP64
SYDE2
FREM1
ZNF292
SERTAD2
REV1
ANKRD28
PARP16
HOXB3
ARHGAP10
ZP4
HOXA4
LBX1
IGFBP2
ID2
HOXA2
BBS9
TPM1
RARB
NBAS
IGFBP6
ADAM18
DCTN3
ARID3C
PHOX2B
CCN1
PDHB
LZTS1
TMEM120B
PRRX1
MSX1
TLE4
MYLK4
SP5
ANK2
FGF19
LRATD2
KDM2B
TMEM107
CLGN
SOAT2
ARID3B
RGS12
CNTN1
MALRD1
SMPDL3A
TLE3
MTRNR2L2
MSH3
DHFR
GRSF1
ERRFI1
NR2F1
ARSG
KDM8
CR1L
TRABD2B
HOXB4
FOXP1
HOXC4
MEIS2
KMT2A
TBX3
ZFHX4
RASSF2
PAX6
BFSP1
MRPL34
ABHD8
EVA1A
HOXC5
IER3
FLOT1
NDUFS7
NEK3
FGR
PKDCC
IFI16
TCF7L2
PLEKHO2
INAFM2
SPATC1L
DBX1
RNF149
SH3BP2
SULF1
ABLIM3
CS
LYL1
CACNA1D
ZNF608
VOPP1
HUS1
HEXIM2
GTF3A
ETFBKMT
TMEM14A
PANK4
HES5
TESC
ARID5A
CITED2
ABCG2
NEO1
TLE1
ZFHX3
KCNAB2
JAK3
ARHGAP24
NUTM2D
PARK7
CCPG1
C15orf65
ID1
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
C11orf24
SASH3
RAI14
PDZRN3
C12orf73
ATG16L2
HOXC6
RPS24
POLR3A
HOXD3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
GRHL3
KDM3A
SLCO4C1
CCDC88A
SLC7A5
SPECC1
ARHGEF10L
NADK
CATSPERG
BRWD1
ERCC1
PHC2
DGKZ
SNCG
MMRN2
BIN2
ENO1
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
FAM110A
ADM
REV3L
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
CAMTA1
PLEC
WNT10B
SNX3
POR
LRRN4
MEF2C
TRAF4
ZSWIM6
MEF2D
KMT2E
MXI1
SOX21
RASSF5
LPCAT3
MTRNR2L8
LNPEP
RARG
IMPG1
SPG7
CPSF4L
DENND2D
PPP1R18
CDC42EP3
ZNF367
SHOX2
RSRC1
CCDC174
DIAPH3
IQCH
AAGAB
REC8
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
LRIG3
ATP23
ZNF718
ZNF595
CMTR1
PNKD
PCNA
POLR2J3
TUBB
SYNPO
IQGAP2
SPACA1
LRIG1
NTRK2
ING1
CLDN2
RNASEH2B
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
SLC9A1
SIRT4
OTUD7B
PDPN
RXRA
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
USP3
ADCY7
TRIM48
TXNRD1
MUC12
PEX14
DFFA
MOBP
ARHGAP4
CYP51A1
SMARCD2
PKM
IFRD2
PCTP
PRDM1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
ADORA2A
COL23A1
RNF166
CYCS
RNF139
IGF2BP3
SH3TC1
DYNLL1
ZDHHC4
BAIAP2
CEP41
HMGCS1
ARIH2
MECOM
CBWD5
CBWD3
LTBR
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
ERI3
ZNF740
CSAD
SOD2
KCTD6
SEMA6D
CPT1A
DTX4
IL6R
PRSS56
AKIRIN1
SLC35E2A
ZFX
ABHD11
KANSL3
FER1L5
CYTH4
HOXB5
MYEOV
PDE4D
LRGUK
PTGES3
FOS
PCDH11Y
NR2C1
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
C12orf29
RND3
SRPRA
HHIP
HNF1A
FCHSD2
SSX2IP
DMRT3
CTTN
PXYLP1
ZNF341
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TBX2
TRMT6
MCM8
ADGRL2
SLC39A13
CSRNP1
BAZ1B
SLAMF8
ANKRD13D
TPST2
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
SEMA4D
TSPAN16
TTI2
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
GATD3B
GATD3A
FAM89B
EHBP1L1
CLTC
SEH1L
RFESD
CDC42EP2
ZNF25
VANGL2
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
SYNJ2
KCNH2
SLC10A2
IL21R
ZNF3
STX18
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
ERLIN2
RASGRP2
ARHGEF1
PEAK3
MRPS31
H2BC5
H1-4
GFRA3
COX5A
RAD50
MIDN
MAP1S
EPM2A
PDE1B
WDR59
ATP8B4
HSD17B8
ZBTB17
TTYH1
PSMD3
PIKFYVE
SPATA25
CTSA
HECTD3
BHLHE40
KRI1
CDKN2D
NR1D1
ARL4A
SBNO2
MYO10
SDE2
KAT6A
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
ZBTB25
ZBTB1
KEAP1
SALL1
MAPKBP1
WT1
TNFRSF19
FMNL1
PRKCD
WTAP
GAD2
CCDC88B
NUBP1
TMEM123
CBWD6
MTF2
SLC22A2
CASC3
SLC39A7
IFNGR1
ASNS
GRK6
MAGEF1
KRT20
MYCBP2
ZNF318
CPNE5
RCOR1
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
LSM5
AVL9
NIBAN3
USPL1
HMGB1
NTAQ1
MC1R
FXYD2
PANK2
UBL7
C1orf159
ATAD3B
SCMH1
H3C12
H2BC17
H2AC17
ITPRIP
GPX4
OR2L13