ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584309 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◣ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
NME6
MAPKAPK5
NUP85
LBX1
RWDD1
CACTIN
VDAC2
IPO13
TAOK3
SUDS3
HSPA9
NVL
NEUROG2
POLR3F
DZANK1
BLCAP
DYNC1LI2
FAM187A
EFTUD2
CCDC103
PSMG2
CEP76
NUP205
HADHB
HADHA
VTI1B
RPL21
LYRM4
FARS2
STAM
POLR2E
C19orf48
GOSR2
ATP5MG
FARSB
CAPRIN1
ACTR10
NCLN
FZD8
EXOSC5
BCKDHA
PES1
ZNF503
FRG2C
SRD5A1
NSUN2
SEC61B
TSNAX
TBCK
AIMP1
ZNF576
IRGQ
REXO1
MRPS7
GGA3
TSN
SKP1
UPF2
TTC8
DCTN1
STAM2
SLC35B1
DUX4
RBBP5
PAK1IP1
C6orf52
IQCG
RPL35A
DPH6
SUPV3L1
PCBP1
PI4KB
PNO1
GOLGA5
COX7A2L
MRPL11
VARS1
SART3
ISCU
PDAP1
BUD31
UFM1
ZRANB2
RABGGTB
EIF4ENIF1
ANAPC7
ICE1
PROSER1
NHLRC3
PSMD12
ANK2
HES3
MYLK4
XPNPEP3
ST13
NDUFA4
RPS12
RPS23
ATP6AP1L
SELENOF
HS2ST1
SMPDL3A
C16orf91
FGF19
SMC2
USP1
TMED1
OSGEP
APEX1
RBKS
BABAM2
HOXA4
ADK
AP3M1
TLE4
HES1
APOM
BAG6
EVA1A
RPS27A
CLHC1
DBX1
SEC22B
IGFBP2
DCTN3
ARID3C
MRPS5
VEZT
FGD6
PIN4
SF3B3
COG4
TRABD2B
PAF1
MED29
CDX2
BFSP1
RGS12
FAM104A
C17orf80
NEUROG3
TMEM120B
NBAS
ARHGAP11A-SCG5
ARHGAP11A
ABCG2
LRATD2
PRDM12
UBE2I
PRRX1
BNIP3
ARHGAP10
NFKBIL1
DDX39B
ATP6V1G2
TAF9
RAD17
AK6
COMMD1
CCT4
FOXP2
MEIS2
OR6B2
NDUFA10
SYBU
BICRA
SOX21
TPM1
ARHGAP24
SYNPO
RUNX1T1
ATOH1
FRG2
DMRT3
MRTO4
EMC1
MXI1
RPS29
LRR1
ADAM18
TMEM14A
FOXD3
CCN1
MALRD1
DSCAML1
SKIL
RPL7
RDH10
EIF2S3
LRAT
ERRFI1
TM9SF1
PRUNE2
CACNA1D
SUCLG1
PCDH11Y
INSM1
PAX8
HOXB3
HOXB4
SEC11C
CEP41
ID1
KDM8
PDHB
PRDM13
FGFR2
PTGES2
TLE1
TPST2
HOXA3
HOXD3
LMO4
OR8J1
NUTM2D
TPRA1
RAI14
ATOH8
SLC7A5
SPACA1
MSX1
METTL24
GTF3C4
DDX31
CCDC33
RBBP7
PDE1B
LRIG1
PDZRN3
BAIAP2
PDHX
APIP
CLEC18C
GPR176
LRGUK
ANKLE2
PMAIP1
TLE3
GADD45GIP1
TMEM107
DTX4
KDM2B
HNF1A
WT1
OAZ3
CYP26A1
KIF26A
METTL11B
TPO
DLX4
C12orf73
NR2F1
NEUROD1
LRIG3
NRARP
RGL1
ZFHX4
DAPL1
MYO10
SALL1
SPTBN1
FHL1
SLA
UBE2QL1
CCDC200
PKDCC
TRIM71
SULF1
CDH16
TLE2
HOXB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARHGEF28
B3GALT5
SEMA6D
TRAF3IP2
TMEM70
ELOC
TBX3
ZNF608
ELMOD2
CAMTA1
NEUROG1
STK36
RNF25
LRRC10B
CDC73
KIF21B
ZFX
PANK4
HES5
CD69
LPIN1
PIM1
LZTS1
DMBX1
NEK3
NEBL
SLAMF8
DAAM1
RPN1
RHOB
PHC2
DDX3X
MAB21L2
ZP4
PCBD2
CCDC198
CHMP4C
GFRA3
CNTN1
ZFHX3
HOXC4
PLAGL1
ZGPAT
ARFRP1
YAP1
C10orf90
TESC
CR1L
NRXN1
CATSPERG
CLDN2
POP5
WRAP53
TP53
USP17L20
USP17L22
LHX2
HOXA2
NXPH4
CNPY2
SOCS3
CLGN
FOXP1
MEF2C
GORAB
FABP5
OCLN
KMT2A
PDE6B
CNN3
PLPPR1
ZNF367
TP53INP1
SOX6
MEOX1
HHIP
HNRNPA2B1
CBX3
MEIS3
MUSTN1
ITIH4
ZNF746
TBC1D8
SALL4
TEX2
RBP3
CETN1
PLEKHA5
SLC39A6
ELP2
NRG2
REC8
CRABP2
ALKBH5
VCAN
IGFN1
RARA
ABLIM3
PAM
GADD45G
DHRS9
NCOR2
FAM222A
LMO1
SKOR1
SKA2
PRR11
LIN28B
PLCH1
NBPF26
NBPF19
NBPF14
PDE12
ADM
GNG12
GUCY2C
ZNF383
ENO1
ERCC1
BBS9
DUSP6
NELFA
DRD2
NCCRP1
REV3L
ECM1
CSN3
CLEC18A
ID2
PDPN
KRT20
PJA2
NPAS1
PCDH18
FAM107A
NEUROD4
LIN28A
ARHGEF1
DHX32
RAN
FSTL1
B3GALT2
DLL4
NCOA2
RASL10B
PKNOX2
PGF
CDC42EP2
GATA3
JAKMIP1
MTMR7
NBPF9
LIMK2
POLR1D
LNX2
SPCS1
GLT8D1
LIX1
TTR
CDRT15L2
WDR59
RCOR1
SYDE2
GSX2
GALNTL5
USP17L11
USP17L18
USP17L21
USP17L12
CDX1
ASXL3
SLC1A3
TNFRSF19
GAD2
FOXB1
KCNK16
PRRC2C
LMO3
GCSAM
AGMO
VAV3
VSTM2L
ARL4C
SOST
GTF3A
NEDD9
PAX3
FGFR4
MNX1
LRP2
DLG2
IRS2
HEY1
DGKZ
ARMC12
CCN2
TSPAN13
PHOX2B
OR5A2
TBL1XR1
MIDEAS
SH3BP5
MRPL38
ADGRL2
DUSP2
ZCCHC13
IPO11
TNP2
PRM3
TYRO3
PEX2
GJA3
SLC10A2
UGT1A4
WBP1L
TMEM132C
TRMT9B
PRSS47
PNKD
FLVCR2
KRTAP12-1
PTPRZ1
CHD8
TMCC3
SFTPC
CA14
KAT6B
PPP1R12B
CLEC18B
CS
VANGL2
ZBTB18
GPC4
EFNB1
BMPR1B
ASPH
BCO1
SH2B1
GFRA1
HES4
VASN
SNCG
MMRN2
TCF4
PAX7
ST18
MSX2
AGPAT4
GPC6
EPB41L5
NR2F6
PMFBP1
ABAT
SLC18A1
TAGLN3
BRWD1
RCOR3
DICER1
PFKM
FAM181A
RPS24
POLR3A
ME2
FLRT3
TRDMT1
PIMREG
WDR74
MYRIP
PCBP4
CRB2
VOPP1
DMD
CER1
CENPS-CORT
CENPS
ABHD11
SLC22A2
CMTR1
TAS2R8
TAS2R7
RAPGEF4
NOTCH1
CNR1
CNOT2
MECOM
PREX2
LEFTY2
RARB
IGFBP6
CDCA7L
ID3
SP5
RBPJ
NFE2
DNAJB7
SOAT2
ARID3B
GATA4
TRIP10
GPR108
MTRNR2L2
MSH3
DHFR
GRSF1
ARSG
KAZALD1
MTRNR2L1
RASSF2
PAX6
MRPL34
ABHD8
HOXC5
IER3
FLOT1
NDUFS7
FGR
IFI16
TCF7L2
PLEKHO2
INAFM2
MBD2
TMPPE
GLB1
CBX4
SPATC1L
RNF149
SH3BP2
AXDND1
UPF3A
HOXA1
LYL1
HUS1
DHRS3
HEXIM2
KDM6B
ETFBKMT
RPS10-NUDT3
RPS10
HSPA1B
ARID5A
CITED2
NEO1
KCNAB2
JAK3
STK38
MRS2
PARK7
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
HNRNPD
ATG16L2
HOXC6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
CCDC88A
SNX1
CIAO2A
SPECC1
ARHGEF10L
NADK
KLF17
FGFRL1
BIN2
OTX1
WDR6
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
FAM110A
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
PLEC
WNT10B
SNX3
POR
LRRN4
TRAF4
ZSWIM6
MEF2D
KMT2E
CABIN1
RASSF5
LPCAT3
MTRNR2L8
LNPEP
RARG
IMPG1
SPG7
CPSF4L
LIG3
DENND2D
PPP1R18
CDC42EP3
SHOX2
RSRC1
CCDC174
DIAPH3
IQCH
AAGAB
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
ATP23
ZNF718
ZNF595
PCNA
POLR2J3
TUBB
IQGAP2
NTRK2
ING1
RNASEH2B
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
SLC9A1
SIRT4
OTUD7B
FTL
RXRA
GALNT10
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
RYBP
USP3
ADCY7
TRIM48
SHB
NKIRAS1
TXNRD1
MUC12
PEX14
DFFA
MOBP
FAM120B
ARHGAP4
CYP51A1
YTHDF2
SMARCD2
PKM
IFRD2
PCTP
PRDM1
HESX1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
NR1D2
ADORA2A
COL23A1
RNF166
CYCS
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
SP7
CNTN4
ZDHHC4
HMGCS1
ARIH2
CBWD5
CBWD3
LTBR
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
ERI3
ZNF740
CSAD
SOD2
KCTD6
CPT1A
IL6R
PRSS56
AKIRIN1
SLC35E2A
KANSL3
FER1L5
CYTH4
HOXB5
MYEOV
PDE4D
PTGES3
HAND1
FOS
AGO1
NR2C1
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
C12orf29
RND3
SRPRA
RBL2
FCHSD2
SSX2IP
CTTN
PXYLP1
ZNF341
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
CALM2
ANKRD13D
DTNB
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
SEMA4D
TSPAN16
TTI2
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
GATD3B
GATD3A
FAM89B
EHBP1L1
CLTC
SEH1L
RFESD
ZNF25
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
SYNJ2
KCNH2
IL21R
CXXC4
ZNF3
STX18
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
LYPD6B
ERLIN2
RASGRP2
PEAK3
MRPS31
H2BC5
H1-4
COX5A
RAD50
MIDN
NAGLU
MAP1S
EPM2A
EIF4H
PKNOX1
ATP8B4
HSD17B8
ZBTB17
TTYH1
PSMD3
PIKFYVE
SPATA25
CTSA
HECTD3
BHLHE40
KRI1
CDKN2D
NR1D1
ARL4A
SBNO2
SDE2
KAT6A
FBXO41
RWDD2A
PGM3
MAPRE2
ARHGEF38
SMPD1
ZBTB25
ZBTB1
KEAP1
MAPKBP1
BCAT2
FMNL1
PRKCD
CPVL
CHN2
WTAP
CCDC88B
STRADA
NUBP1
TMEM123
CBWD6
MTF2
CASC3
TCHP
SLC39A7
IFNGR1
ASNS
GRK6
MAGEF1
MYCBP2
ZNF318
CPNE5
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
LSM5
AVL9
NIBAN3
USPL1
HMGB1
NTAQ1
MC1R
FXYD2
USP17L15
PANK2
UBL7
C1orf159
ATAD3B
SCMH1
H3C12
H2BC17
H2AC17
ITPRIP
GPX4
MAST2
OR2L13
OR2AJ1
SACM1L
DYNLT1
NGRN
SH3BGRL3
MCU
HES7
BUD13
BNC2
TIGD5
EEF1D
DPEP1
SCAMP2
VPS37C
RUNX1
RNPEPL1
RER1
MORN1
CAPG