ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584312 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◣ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PSMD1
DUX4
TAOK3
SUDS3
ZNF335
FRG2C
RABL2A
RABL2B
NME6
POLR3F
DZANK1
CACTIN
MAPKAPK5
DYNC1LI2
NUP85
PSMG2
CEP76
RWDD1
VDAC2
DCTN1
MRPS7
GGA3
HSPA9
TBCK
AIMP1
IPO13
FARSB
FAM187A
EFTUD2
CCDC103
ZNF576
IRGQ
RPL21
VTI1B
EXOSC5
BCKDHA
ZNF503
TSNAX
HADHB
HADHA
REXO1
SEC61B
POLR2E
STAM
C19orf48
SKP1
NUP205
GOSR2
RBBP5
UPF2
STAM2
FRG2
ANAPC7
NCLN
TTC8
LYRM4
FARS2
CAPRIN1
PROSER1
NHLRC3
NVL
COX7A2L
PAK1IP1
C6orf52
SRD5A1
NSUN2
PNO1
DPH6
SUPV3L1
HOXA4
ATP5MG
ACTR10
SMC2
ADK
AP3M1
PES1
SELENOF
HS2ST1
BLCAP
SLC35B1
OSGEP
APEX1
RABGGTB
TMED1
TLE1
PI4KB
RPS23
ATP6AP1L
MRPL11
NEUROD1
RPS12
USP1
SF3B3
COG4
ZRANB2
PDAP1
BUD31
MRPS5
ICE1
RBKS
BABAM2
RND3
UFM1
RPS27A
CLHC1
APOM
BAG6
PSMD12
KITLG
EIF4ENIF1
TSN
SART3
ISCU
IQCG
RPL35A
NCOR2
COMMD1
CCT4
CCDC200
FZD8
MSX1
SEC22B
SMPDL3A
UBE2I
RPS29
LRR1
GOLGA5
XPNPEP3
ST13
PAF1
MED29
ABCG2
VARS1
KCNK16
MYLK4
NDUFA4
PCBP1
TM9SF1
BICRA
SEMA4D
FGD3
C1orf105
OR6B2
NDUFA10
FGF19
PAM
SH3BP5
ARHGAP11A-SCG5
ARHGAP11A
HOXA3
ARHGAP24
FAM104A
C17orf80
CCN1
USP17L20
USP17L22
ANK2
SPRR1A
DHRS3
QPRT
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MRTO4
EMC1
KCNK10
EIF2S3
POU2F2
LRATD2
RARA
GUCY2C
SDK2
PDE6B
SEC11C
PDE1B
TRABD2B
TRMT9B
SYNPO
CD69
CHD7
ANKLE2
GALNT14
TLE4
ATOH8
WDPCP
C10orf90
PIN4
USP17L11
USP17L18
USP17L21
USP17L12
TPO
GAS2L3
SKIL
HES1
LRIG3
NR2F1
HMX2
MEF2C
ZNF775
WBP1L
PDHB
RPL7
RDH10
GNG12
PDZRN3
ZSWIM6
CCDC198
SLA
TRPM3
NEUROG2
NEUROG3
HES3
NFKBIL1
DDX39B
ATP6V1G2
CDX2
PTGES2
VEZT
FGD6
PMAIP1
ARHGAP10
TAF9
RAD17
AK6
ZP4
SUCLG1
ATOH1
NEUROG1
STK36
RNF25
ZGPAT
ARFRP1
BNIP3
PDE12
LBX1
IGFBP2
GADD45GIP1
OAZ3
WDR74
ID2
HOXA2
INSM1
BBS9
LEFTY2
TPM1
RARB
CNPY2
GTF3C4
DDX31
HOXB3
PCBD2
NBAS
DAPL1
IGFBP6
CDCA7L
PDHX
APIP
CDC73
ADAM18
DCTN3
RPN1
DLL4
ARID3C
C16orf91
PHOX2B
DLX4
ST18
LZTS1
TMEM120B
CCDC33
ZNF383
PRUNE2
SYBU
GORAB
ID3
PRRX1
DUSP6
TPRA1
FOXP2
SP5
RBPJ
NFE2
DNAJB7
KDM2B
TMEM107
CLGN
SOAT2
ZNF746
ARID3B
GATA4
TMEM70
RGS12
ELOC
CNTN1
MALRD1
TLE2
MYRIP
ALKBH5
MRPL38
RBBP7
GADD45G
TRIP10
GPR108
DSCAML1
TLE3
MTRNR2L2
MSH3
DHFR
POP5
GRSF1
ERRFI1
ARSG
KDM8
DMBX1
METTL24
KAZALD1
MTRNR2L1
RUNX1T1
CR1L
HOXB4
FOXP1
PRDM12
HOXC4
MEIS2
KMT2A
TBX3
CYP26A1
ZFHX4
RASSF2
PAX6
MSX2
BFSP1
MRPL34
ABHD8
EVA1A
HOXC5
LPIN1
SH2B1
IER3
FLOT1
NDUFS7
NEK3
FGR
PKDCC
IFI16
TCF7L2
PLEKHO2
HOXB1
INAFM2
MBD2
TMPPE
GLB1
SPCS1
GLT8D1
CBX4
SPATC1L
DBX1
RNF149
SH3BP2
AXDND1
UPF3A
SULF1
HOXA1
ABLIM3
CS
LYL1
METTL11B
CACNA1D
ZNF608
VOPP1
HNRNPA2B1
CBX3
HUS1
HEXIM2
KDM6B
GTF3A
ETFBKMT
TMEM14A
PANK4
HES5
LIN28A
TESC
RPS10-NUDT3
RPS10
NELFA
HSPA1B
ARID5A
CITED2
NEO1
ZFHX3
KCNAB2
JAK3
STK38
NUTM2D
MRS2
PARK7
TIGD1
EIF4E2
CCPG1
C15orf65
ID1
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
RAI14
KAT6B
C12orf73
HNRNPD
ATG16L2
HOXC6
KIF21B
RPS24
POLR3A
HOXD3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
GRHL3
LYPD1
KDM3A
PRDM10
PAX8
SLCO4C1
CCDC88A
SNX1
CIAO2A
SLC7A5
TBC1D8
SPECC1
ARHGEF10L
NADK
CATSPERG
BRWD1
ERCC1
PHC2
DGKZ
SNCG
MMRN2
KLF17
PLAGL1
FGFRL1
BIN2
ENO1
OTX1
WDR6
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
FAM110A
ADM
NCOA2
REV3L
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
CAMTA1
PLEC
WNT10B
SNX3
POR
LRRN4
TRAF4
MEF2D
KMT2E
CABIN1
MXI1
SOX21
RASSF5
LPCAT3
MTRNR2L8
LNPEP
RARG
IMPG1
SPG7
CPSF4L
LIG3
DDX3X
DENND2D
PPP1R18
CDC42EP3
ZNF367
SHOX2
RSRC1
CCDC174
DIAPH3
IQCH
AAGAB
REC8
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
ZDHHC1
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
ATP23
ZNF718
ZNF595
CMTR1
PNKD
PCNA
POLR2J3
TUBB
IQGAP2
SPACA1
MEOX1
LRIG1
TYRO3
NTRK2
ING1
CLDN2
RNASEH2B
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
CNOT2
SLC9A1
SIRT4
OTUD7B
FTL
PDPN
RXRA
GALNT10
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
RYBP
USP3
CDX1
ADCY7
TRIM48
SHB
NKIRAS1
TXNRD1
MUC12
PEX14
DFFA
MOBP
FAM120B
ARHGAP4
CYP51A1
YTHDF2
SMARCD2
PKM
IFRD2
PCTP
PRDM1
HESX1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
NR1D2
ADORA2A
COL23A1
RNF166
CYCS
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
SP7
CNTN4
ZDHHC4
BAIAP2
CEP41
HMGCS1
ARIH2
MECOM
CBWD5
CBWD3
LTBR
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
ERI3
ZNF740
CSAD
SOD2
KCTD6
SEMA6D
CPT1A
DTX4
IL6R
PRSS56
AKIRIN1
KIF26A
SLC35E2A
ZFX
ABHD11
KANSL3
FER1L5
CYTH4
HOXB5
MYEOV
PDE4D
LRGUK
PTGES3
HAND1
FOS
AGO1
PCDH11Y
NR2C1
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
C12orf29
SRPRA
RBL2
HHIP
HNF1A
NXPH4
FCHSD2
SSX2IP
DMRT3
CTTN
PXYLP1
ZNF341
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TBX2
TRMT6
MCM8
ADGRL2
SLC39A13
CSRNP1
BAZ1B
SLAMF8
CALM2
ANKRD13D
TPST2
DTNB
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
TSPAN16
TTI2
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
GATD3B
GATD3A
FAM89B
EHBP1L1
CLTC
SEH1L
RFESD
CDC42EP2
ZNF25
VANGL2
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
SYNJ2
KCNH2
SLC10A2
IL21R
CXXC4
ZNF3
STX18
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
LYPD6B
ERLIN2
RASGRP2
ARHGEF1
PEAK3
MRPS31
H2BC5
H1-4
GFRA3
COX5A
RAD50
MIDN
NAGLU
MAP1S
EPM2A
EIF4H
PKNOX1
WDR59
ATP8B4
HSD17B8
ZBTB17
TTYH1
PSMD3
PIKFYVE
SPATA25
CTSA
HECTD3
BHLHE40
KRI1
CDKN2D
NR1D1
ARL4A
SBNO2
MYO10
SDE2
KAT6A
FBXO41
RWDD2A
PGM3
MAPRE2
ARHGEF38
SMPD1
ZBTB25
ZBTB1
KEAP1
SALL1
MAPKBP1
WT1
BCAT2
TNFRSF19
FMNL1
PRKCD
GATA3
CPVL
CHN2
WTAP
GAD2
CCDC88B
STRADA
NUBP1
TMEM123
CBWD6
MTF2
SLC22A2
CASC3
TCHP
SLC39A7
IFNGR1
ASNS
GRK6
MAGEF1
KRT20
MYCBP2
ZNF318
CPNE5
RCOR1
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
LSM5
AVL9
NIBAN3
USPL1
HMGB1
NTAQ1
MC1R
FXYD2
USP17L15
RASL10B
PANK2
UBL7
C1orf159
ATAD3B
SCMH1
H3C12
H2BC17
H2AC17
ITPRIP
GPX4
MAST2
OR2L13
OR2AJ1
SACM1L
DYNLT1
NGRN
TCF4
SH3BGRL3
SALL4
RGL1
MCU
HES7
BUD13
BNC2
TIGD5
EEF1D
DPEP1
SCAMP2
VPS37C
RUNX1
RNPEPL1
RER1
MORN1
CAPG
GRIP1
CISH
NIBAN2
DLG2
EOLA2
ZNF436
ARF3
GPSM3
GPATCH8
RPL17-C18orf32
RPL17
C18orf32
TAF12
NCBP2AS2
NCBP2
LGALS1
OST4
LIX1
ARHGAP27
YBX2
USP21
CYB5R4
GPR176
ARHGEF18
GABRB2
MRGBP
DONSON
DNAJB8
ATAD3A
CNOT6
KLHL25
JAKMIP1
KIF1C
INCA1
METTL25
FAM227B
DTWD1
DDX23
CCDC59
TDP2
DENND1A
CNPY3
ACOT13
RAP1GAP2
TMEM65
FABP5
YY1AP1
PTEN
KLLN
DAP3
C12orf65
HPF1
ADAM17
PGK1
MDC1
NINJ2
SCAF1
RRAS
MT2A
ACOT2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
GADD45A
UBE2L3
SPIN1
RIMBP3C
RIMBP3B
TSPAN4
POLR2L
SLC9A3R1
NUDT15
GOLIM4
CEP135
CCNL1
ASB1
NANP
PTP4A3
CACYBP
GSPT1
PTDSS1
MTERF3
SPTBN1
ARID1A
SERTAD2
GBX1
RNF130
UNK
EIF3D
MTMR1
CDS2
MFN2
EHD1
ATG5
HYLS1
POU2F1
GYPC
LTB4R
LTB4R2
CIDEB
TRAP1
C21orf91
ZNF219
LANCL2
FOXD3
RPLP1
RITA1
DDX54
APBB1IP
POLG
ADAP1
IQCE
FLI1
CTSC
TKFC
DDB1
DISP3
ZCWPW1
MEPCE
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
LRCH4
FBXO24
NOL4L
SQSTM1
ASXL3
SGK1
NOXO1
GFER
EIF5
GTF2H3
FKBP5
EIF2B1
BANP
DLX2
TEX46
KDM1A
USP34
TRAM1
UBIAD1
SP2
RTN4
SLC16A6
THUMPD3
MAPK6
IMPA1
DMD
MIDEAS