ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
LOC102724770
DGCR6
ITGB8
PIGX
CEP19
SMCO1
MAMDC2
KRT31
PYCR2
CCDC38
AMDHD1
HES1
MANBAL
COL17A1
PAMR1
MBNL1
NDUFB5
MRPL47
THOC3
BTBD3
SOX2
CAPNS2
LMCD1
CDKAL1
VWCE
SDK1
NAV2
CPSF4L
FJX1
GRK6
OLFML1
PCCA
LYRM1
DCUN1D3
RPGRIP1
MTF2
RFLNA
ABCC1
SLC16A6
ARSG
F11R
EVA1A
DUX4
TES
TNRC18
LOC100129484
MMP20
CCZ1
GADD45G
LCLAT1
LIMK2
ZNF775
MAP3K7
PTMA
ANKRD1
CYP24A1
VIT
HMGB1
MED25
FUZ
SLC20A2
ZNF770
CYP1A1
NWD1
PXMP4
ZNF341
SMCP
PSPH
CCT6A
KRT16
SGPP2
CDC42EP3
ITGB4
FAM227A
CBY1
KIF6
SSR3
KMT2B
GUSB
MANSC1
BORCS5
SYT2
ANXA11
LBH
HGS
ARL16
TM4SF1
HERPUD2
TAGLN2
EPB41L1
PLPP2
GOLPH3L
RAG2
IFTAP
ARID2
CNP
ARID5B
ALPK2
PLA2G4B
JMJD7-PLA2G4B
JMJD7
ZNF503
PPP1R13B
NFE2L2
FXYD3
FGD3
TM4SF20
UNC13B
NOTCH1
MEOX1
BCL2L1
SAXO2
EFL1
ERLIN2
WDR74
STX5
PLSCR2
SH3PXD2A
UGT1A6
ACVR1
CHST6
NME1
ETV1
DDX17
CEP41
CYP2S1
TNXB
C4B_2
C4B
FBXO27
CUEDC1
PPP3R1
DST
WDFY2
TRMT2A
RANBP1
CYP21A2
C1QTNF7
CDR2L
PHF5A
ACO2
SIPA1L2
LOC391322
CEMIP
CHSY1
CTSV
KIF13A
RNF13
GAST
JUP
BMP7
TMEM17
ADH7
ZNF608
FAM102A
ZBTB34
IGFBP2
ABCC10
SNX31
SCPEP1
FCHO1
PSG1
SPDL1
ST6GALNAC2
MMP10
TJAP1
TMEM132A
LAMP1
SMAP1
IQCH
AAGAB
ZMYM1
OGN
ETV4
NDE1
MARF1
IKBKB
SERPIND1
SMCO2
ZSCAN2
HOPX
NOS3
AGPAT3
PER2
LCA5
UBTD2
CORO1C
PYGB
TRIM2
IFRD1
CYTH1
IFT80
MNT
TPM1
SMC4
SAR1B
NFIB
ALK
NIBAN2
PLD1
PLEKHG1
SEM1
HOMER2
NINJ2
MARCKS
SUN1
KANK1
SLC25A25
NAIF1
KDM5B
AADAC
RNF183
KCNN2
ZNF423
PHACTR2
SLC7A5
SDC1
CLDN4
PPDPF
ABHD11
SIX2
TCP11L2
SEMA3D
DDX5
CEP95
POLG2
ARNTL
NUP153
MTMR1
KIF14
ID1
ABCC2
EHF
SPAST
FOXN2
LFNG
SMAD3
DGKH
SNRPE
SLC2A8
TMEM200B
CNTN1
TLK2
FIGNL1
IER3IP1
TUT7
LRP11
MAPKBP1
HDAC9
EXT1
MMP11
CHCHD10
RMI1
HNRNPK
LGALS7
NAA35
DENND4A
ZFAND3
POLR2M
MS4A2
CCT2
GALNT11
ADGRL1
THG1L
LSM11
SMARCA2
DUSP1
DHX8
MAST4
LPP
BST1
CSTA
SHF
DYNC2I1
ESYT2
NRCAM
MCCC1
PTPRB
TUBA1C
YEATS2
UACA
OGA
POMT2
GSTZ1
CAMKK2
NKIRAS1
STK3
OSR2
NR1D2
FDXACB1
C11orf1
ALG9
PTCHD4
LRRC18
KCNJ15
FOXP1
P2RY12
DMRT2
P2RY13
CCDC200
RDX
DAGLB
TBC1D2
ERG
KRT86
CHST12
SLCO1B3
GSTO1
TTC39C
RABGAP1L
GGH
SLC44A1
IBTK
BFSP1
UAP1L1
SAPCD2
RNF152
CYP3A7-CYP3A51P
CYP3A7
MMP13
VDAC2
PPP1R10
MRPS18B
ATAT1
MNAT1
MPP3
CD300LG
TMUB2
SMARCAD1
KRT74
CAPRIN1
KRTAP3-2
KRTAP3-1
KLHL6
ONECUT2
RAP1A
CBX1
GPR87
ADAM28
UNK
H3-3B
BAHCC1
MUS81
CFL1
VGF
NPIPB12
ACYP2
PSME4
GPC1
TRPV4
ZNF436
ZCCHC3
C20orf96
SNCA
TP53AIP1
EMP2
SPIN1
RPL27
IFI35
RBM39
KIAA0040
PGAP4
OTOGL
C3orf20
EIF4A2
UBR2
LAPTM4B
PEDS1-UBE2V1
PEDS1
SPTSSA
FGF1
GET3
CCL26
HMGN1
UNC5A
CEP20
IL1F10
KIF22
ZG16
IL36RN
CD44
OR5K3
OR7C1
OR7A5
OR7A10
DLGAP1
TJP2
NTN5
NELFCD
EFNB2
SYNCRIP
S100A6
SH3BP4
TRMT1
NACC1
PMEPA1
LRRC72
CHD1L
PRKAB2
CLSPN
FMN1
FGD6
CTTNBP2NL
VEZT
TMX2
MED19
N4BP1
TACC2
MSMB
LDLRAD3
OSER1
CHD6
KLHL38
RAPGEFL1
CDH13
EGFR
DLX5
ETFB
DUSP29
ZDHHC3
EXOSC7
CCDC57
GOLGA6C
ABLIM1
LAMA1
RFWD3
MAP11
BAG3
NACA2
LAMTOR4
KIF21B
IGF1R
CPN1
MSANTD4
GDF5
CEP250
HSBP1
SYCP2
FAM217B
TEX26
WDR49
MUC20
PHF20
SLC9A8
CLNS1A
ZFC3H1
THAP2
ECT2
ART1
LSM5
AVL9
SLC9A9
PARP8
KLF5
POLB
TMEM139
CASP2
ACTR2
ZNF703
LCE3B
LCE3A
SLC7A11
UBALD2
MERTK
CTXN3
ETV5
ISL2
CLUAP1
C16orf90
LRRFIP2
CES3
CDIN1
SMIM11B
SMIM11A
GRAMD1C
NPIPB8
COL23A1
ESRRA
CATSPERZ
ADRM1
ITPKB
H4C3
H1-6
KRT13
CLDND1
TAL2
RAPGEF5
S1PR3
C9orf47
DGLUCY
PRDM2
ETF1
TNFAIP8
ETFRF1
CFAP94
NT5C2
KDM2A
NAAA
CTDSP2
SCNN1A
LTBR
SOST
SYBU
BCL3
DDR1
CHMP4B
FNIP2
WWTR1
KRT19
KRT15
OPA1
SLC6A2
ID3
DMRTA2
STEAP3
ADAM18
ETHE1
PPP2R3A
NFATC3
PIN4
TCF12
GRAMD2B
TP53BP1
PNKD
SGTB
NLN
METTL7A
EXOSC2
MCM7
AP4M1
MTRNR2L8
ARHGEF19
GGT1
GSN
SERPINA1
ABO
CRISPLD1
ACSS1
TMEM138
CYB561A3
SPRED2
SNAPC3
FILIP1L
CMSS1
VRK2
IQGAP1
PDC
COLGALT2
MTHFD1L
RABGAP1
ZNF609
MYH11
MEF2C
ZNF277
DOCK4
SLC6A1
OSCP1
CERS3
RIMKLB
ALDH3A1
ZBTB40
KLHL5
TMEM254
TJP1
PELO
ITGA1
IGFL3
LNX1
PALMD
HNRNPUL1
GPAT4
SFR1
CNN3
MTUS1
TP63
SIX4
CASD1
SPRY4
EAPP
RNF43
TSKS
AP2A1
POLR3E
RBBP9
TTF2
SEC23B
PCYT1A
AHR
STK31
C1orf105
DSC2
BCAT1
UFD1
CDC45
SPO11
NPIPB13
TAF1L
DNAJB1
TECR
MME
KMT5A
SFXN1
CELA3B
RBM47
SLC25A28
LTBP2
GNA13
CD163
ESRP1
IL1A
IGFL4
SPTLC2
NPIPA8
NPIPA7
FAM83G
ANTXR1
ZFR
SOD3
PDIA4
CYB5A
BCO1
PCYOX1
TIA1
CCDC43
HLTF
EHD4
HBP1
REXO2
CC2D1B
TTC7A
MCFD2
COL7A1
IGSF3
ERAP1
TPST2
ABTB2
SCOC
PROSER1
NHLRC3
LOC100505841
SYNGR2
AMN1
COA6
KIF23
C12orf43
TGIF1
KIAA1549
SLC25A11
RNF167
PFN1
GP1BA
XPA
STARD7
OTOP3
BCL2L13
ATP6V1E1
STON1-GTF2A1L
STON1
CAVIN1
CAV1
PLCB4
RTP1
IL10RA
PHAX
ALDH7A1
ZMIZ2
ENAM
SMAD5
SGK3
MICALL1
TUT1
MTA2
SOX21
SACS
NES
PIPOX
CDX2
PLAGL1
METTL11B
SOX6
SMAD7
LRRN1
LRRC10B
DNMBP
CADPS
MUC1
ATP1A4
REST
OTX2
AGO1
CACHD1
ARHGEF38
NR5A2
LRRN3
TERF1
SOCS3
TMPRSS11E
CD82
FLVCR1
DUSP6
DNMT3B
MUC4
MUC3A
ZFHX3
KLHL7
WFDC8
NTRK2
OR5AR1
TENT5B
GLRA1
NRG1
PPBP
PF4
BCOR
TNNI3K
FIGNL2
RMND5B
SPATA45
RPH3A
KIF21A
BDH1
TDGF1
PIM2
FGD4
SFRP2
GDF11
DPPA5
ZBTB8OS
RBBP4
APBA2
ATP8A2
ZNF483
MOBP
TARS1
SMPD1
URM1
GNAI1
CD99L2
TCF7L1
LRRC2
SERINC5
SLTM
TRIM48
SNRPN
GAS1
ITPRID1
BTG2
GLI2
RNASE6
C1orf127
USP44
SSB
LZTS1
DMXL1
FGFR2
EDDM3B
CELF3
TALDO1
SHCBP1L
SHC1
FLAD1
CKS1B
HOXB1
MLEC
APOBEC3F
RIIAD1
SGK1
PPP1R16B
FAM222B
RIPK1
RNASET2
C9orf85
ICMT
HES3
KIF5C
CLDN9
MTRNR2L1
GBX2
PUF60
PHC1
GIMAP5
SAMHD1
CDC14B
GXYLT2
MTRNR2L2
MSH3
DHFR
CLDN6
CRYAA2
CRYAA
PDPN
GOLGA6D
RCN1
TREX1
SHISA5
SCN5A
MID1
PRICKLE1
ZSWIM3
ACOT8
GLYATL1B
ABHD17B
OBI1
FAM174B
GSX2
TMCC1
VCAN
ITPRIP
DHX32
SRRM4
TPH2
NANOG
SNX16
HESX1
GAD2
PBX2
GPSM3
CBFA2T2
TMEM47
RPS24
PARP1
PREX2
FZD2
PHLPP2
NFE2L3
SAMD5
CRH
LIN28B
SNURF
GPRC5B
ZNF398
CDYL
SCGB3A2
UQCRHL
POSTN
CA6
TMEM70
PGPEP1
NADK
TEKT3
PALM2AKAP2
FBP1
TRIM24
ASXL3
SLC36A2
LRRTM3
FZR1
MFSD4B
TUBB2A
LDB2
TESK2
PPP1R16A
ECE1
RFX4
FBXW11
KIAA2012
KDR
SORBS2
ZEB2
TMEM167B
MTM1
TRAPPC8
PSMD9
HPD
NAA50
CAMTA1
ATP6V1A
MRPL20
VENTX
UTF1
LY96
FOXH1
HSCB
CHEK2
FGF12
LIMCH1
FAM120B
TIMP4
CSAD
TBC1D16
DLL1
CHN2
FOXB1
TNC
NCDN
KIAA0319L
LINGO1
ZNF740
SASH1
GOLGA6A
VIM
SALL4
DCAF4L1
RGS3
MMACHC
FRAT2
SLC30A9
SH3GL1
CHAF1A
ANKRD6
NFE2L1
RASGRF2
ARAP3
C1orf100
GJA1
TMEM41B
BTBD11
KCNJ1
PSIP1
SOX14
TOMM40
LHPP
NOTCH2NLC
DOK7
FBXL19
ST18
GSAP
GPR85
MORF4L2
POU5F1
RASAL2
GNAI2
MAD2L2
DRAXIN
SELPLG
TTYH1
BUB1
SCARB1
HBG2
HBG1
SALL3
EPHB3
STN1
MFHAS1
MDN1
GPC4
IER5L
SOX5
TRIB2
TBC1D14
FBXO40
PSMG3
ITGB3
ITGA2
ZNF343
CCBE1
ZSCAN10
OSBPL1A
FZD8
MED12
IL2RG
GOLGA6B
SMYD2
OR2T1
ENSA
NDUFS5
SCAF4
HOXD11
NDST1
HHIP
PALLD
BEND3
CREB5
ZNF18
KIFBP
FRG2C
CYTH2
NEDD9
CDH18
FGF2
PTBP2
CTNND2
SLC34A1
PFN3
PTPRN2
RBFOX2
CERCAM
TOX3
RASA1
MYCL
ZYG11A
GDF3
NOTCH2
SMC6
GEN1
GCNT2
ETS1
H3C15
H3C14
HMOX1
FAM180A
ADAMTS18
LRRTM2
CTNNA1
URGCP
CELF4
ARIH1
ZNF335
NBPF15