ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

GRK6
MTRNR2L2
MSH3
DHFR
KIF5C
MTRNR2L8
FOXO6
MTRNR2L1
G3BP1
PUF60
SCRIB
GET3
DACT3
EMSY
CYTH2
RBBP6
SLC25A11
RNF167
PFN1
GP1BA
NUAK2
RASA3
UQCRHL
ZNF576
IRGQ
PRND
CCT2
KIFBP
TMPRSS9
OSBPL1A
FAM102A
SLC25A25
NAIF1
HGS
ARL16
SPHK2
RPL18
FAM83E
ZBTB2
UNK
H3-3B
CLP1
YPEL4
SYAP1
CTPS2
ETV4
RFX4
DICER1
PLTP
TP53RK
ZSCAN18
HMGB1
SPATC1L
FLYWCH1
IREB2
CTNND2
CROCC
PIH1D1
ALDH16A1
PELI1
FAM227A
CBY1
WBP11
C12orf60
TESK2
MMACHC
TBC1D17
AKT1S1
NGDN
PNKP
NDRG4
REEP6
PCSK4
RRP36
MEA1
TMX2
MED19
NRCAM
POR
TBRG4
HEXIM2
CEP41
OSBPL2
CDK16
ETV1
PRR5L
MTF2
NF2
RSPH14
RAB36
BSDC1
PTMA
IGFL3
ZNF77
DHX9
CHMP7
PSMD3
CHN2
MEIS3
EPHB3
PPME1
C2CD3
TMEM167B
TAF13
MTRNR2L9
PFKM
HNRNPH1
LCA5
YLPM1
CHD1
GPC4
RTN4
HSPH1
BTG1
H2AZ2
INTS9
HMBOX1
SDCCAG8
CEP170
HNRNPL
TMUB2
NUP214
SMARCC1
DIMT1
IPO11
PWWP2A
TPCN1
IQCD
TMBIM6
KIF5A
DCTN2
NRARP
ZNF48
TBC1D10B
MYLPF
DYNLL1
CCDC169-SOHLH2
CCDC169
SORT1
CACNA1S
ASCL5
SENP8
MYO9A
ZBTB45
TRIM28
ATP2C2
EGR3
NRL
DCAF11
DIABLO
CARM1
JOSD1
GTPBP1
TOMM40
TAX1BP3
EMC6
AP3M2
TOB2
TXLNG
TRDMT1
FZD9
MSI1
EHD4
SUFU
ACTR1A
PIK3R3
SPEM3
CDK12
SPEM2
SPEM1
MED1
MBNL3
TMEM139
CASP2
TMEM143
SYNGR4
C1QTNF5
MAD2L1BP
GTPBP2
UFSP2
C4orf47
ABHD2
RNF26
FAM120B
DLL1
MRPL34
DDA1
ABHD8
LFNG
TMEM41B
TUT1
MTA2
SHBG
FXR2
ELL
LGI1
AGO1
RGPD2
RGPD1
PTH2R
ZNF672
FGD3
SAMD1
MISP3
C19orf67
FGFBP3
CTTNBP2NL
NWD1
SENP2
SGCA
SPAG4
ACTR2
HNRNPC
GNAT2
AMPD2
HES5
PANK4
HACL1
BTD
ZNF286A
IL36A
ITGA2
SAXO1
RRAGA
ETV5
ZCWPW1
PPP1R35
MEPCE
CSPG5
DSE
TSPYL4
C1orf127
ARHGAP19
WDR81
TLCD2
DHX8
FAM181A
KMT5C
OGA
TENT5C
CNOT3
HDGFL2
MRPL45
LIX1L
MAMDC2
ZNF775
DERL1
RPL13
HSPG2
ZCCHC8
TPGS1
PPP1R16B
RFX1
PRMT5
NUBP1
RBM23
SELPLG
ZDHHC5
SHC1
FLAD1
CKS1B
FOXB1
NKX2-2
KPNA2
USP44
STAG3
GPC2
GAL3ST4
TEPSIN
NDUFAF8
TCTN3
PODNL1
DCAF15
CCAR2
C8orf58
PIN4
ZFC3H1
THAP2
AHNAK
HPCAL1
ANKRD6
RFX2
CCDC90B
E2F6
SOX21
ETFB
NSD2
LETM1
TOMM40L
APOA2
FGD6
VEZT
MOGS
HES6
WBP1
INO80B
LSM10
LRRC10B
ZSCAN20
ABCB4
TRIM2
MEX3D
RBM39
SLC25A44
CTIF
PIF1
TEX50
RNF169
CDC5L
TUBB
MDC1
LRRN1
TRIM69
NAA80
IFRD2
HYAL3
SPRY4
FAM219A
DNAI1
CHD6
PRTG
MSANTD4
MOB1B
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DMWD
URM1
GNA12
RPS13
NEURL4
ACAP1
MUC1
NOTCH1
PIK3C2A
POLDIP3
NOL4
BMF
CCDC61
ZSCAN2
PLEKHB1
CTBP2
TP53INP1
DUSP1
RAB5B
PMEL
CDK2
BAIAP2
PC
MPRIP
HYAL1
RRP9
PARP3
MYCL
SPATA13
UCKL1
BANP
WDFY2
CRISPLD1
RNF31
PSME2
PSME1
EMC9
PAIP2B
RPL36
MICOS13
HSD11B1L
DDR1
DNM2
ZNF251
LRRC23
TBC1D31
ENO2
SELENOF
HS2ST1
AQP2
AQP5
FBXO46
MEIOSIN
JOSD2
ASPDH
GFRA1
HNF1A
NOL3
KIAA0895L
EXOC3L1
E2F4
EVI5L
KLF1
GCDH
DNASE2
C12orf71
EPRS1
UVRAG
WDR49
SLC33A1
GRHPR
UNKL
LYSMD3
SMUG1
RPS23
ATP6AP1L
SESN2
TMEM256
PLSCR3
NLGN2
XPC
LSM3
SP1
NUP62
IL4I1
ATF5
PPP2R1A
FZR1
TCF4
DOHH
H3C15
H3C14
ZNF195
H2AC19
H2AC18
ZFYVE1
CDC25A
CSRP2
KHDRBS1
CLPB
RAC3
INVS
ERP44
MAMSTR
COMT
CENPX
TMEM91
B9D2
LRRC45
TGFB1
FGD4
ZNF358
MCOLN1
ZNF548
ASMTL
NAB2
NEMP1
DDX17
TPST2
CCN2
H3C6
H2BC8
H2AC8
KBTBD6
VPS26C
ZBTB20
SEL1L
NDUFB5
MRPL47
SOCS3
TOX3
UGT1A1
MROH2A
PCOLCE
MOSPD3
CLIP1
FUT5
PRCC
TCIRG1
NDUFS8
HDGF
MRPL24
GSC2
HBP1
CPA4
RNF5
AGPAT1
AGER
GGPS1
ARID4B
CDH2
ASPSCR1
NOTUM
KDM2A
VPS37B
ERGIC2
SIRT7
PYCR1
MAFG
WDR59
UBE2S
RPL27
IFI35
KNTC1
PDP1
MRFAP1L1
BLOC1S4
MRPL27
EME1
NDUFB8
HIF1AN
PLAGL1
JAG1
TRAPPC3
MAP7D1
RPUSD4
FAM118B
NDUFA5
TICRR
UXT
ELK1
HEXIM1
SLC25A41
KHSRP
ZNF771
NSUN3
DHFR2
BABAM1
CELSR3
RGS12
ILF3
SRRM1
HDAC9
IER5L
TAGLN3
MPV17L2
RFX3
C16orf96
TRIOBP
BRCA1
CRB2
TSNAXIP1
RANBP10
SPAST
NAA40
TRMT1L
SWT1
ZNF823
EHBP1
SYMPK
FOXA3
CRYAA2
CRYAA
SFRP1
ATF4
CD2BP2
SINHCAF
FAM185A
TRAF7
TOR2A
RAB26
TSPAN31
CDK4
MARCHF9
SRF
RAB5C
SLC35E2B
CDC14B
WBP1L
ALDH2
MUS81
CFL1
AMMECR1L
LUC7L2
FMC1-LUC7L2
FMC1
SF1
PYCR3
GFUS
TREX1
SHISA5
ADAMTS18
MMRN1
NASP
NNMT
NFATC2IP
MEGF8
EPC2
KIFC1
VIM
NBEAL1
ITGB1
GID4
ATPAF2
S1PR4
NCLN
RPL35A
IQCG
LMLN
ADAT1
SIX2
VEPH1
COPZ1
BMPR1B
DVL2
RAG2
IFTAP
CCDC146
PHF23
GABARAP
PIP4P1
OSGEP
APEX1
PNP
RBM15
SLC35B4
LPIN2
ZSWIM4
DNM1L
TUBA1A
SND1
KBTBD3
AASDHPPT
CERCAM
GPATCH8
BBS7
RPS11
RPL13A
DGLUCY
CCNT1
SDCBP
IP6K2
GHITM
CIC
PCF11
UBXN4
RPS6KA5
NUMB
SMARCAL1
PHB2
H2AX
DPAGT1
UBE4B
RPL29
HMBS
LIN52
ALDH6A1
ZNF653
ARIH1
LRP2
C1QTNF2
PCDH8
PRKRIP1
ELP5
CTDNEP1
ING4
RLF
ZNF547
TRAPPC2B
CLDN7
SPC24
BFSP1
CAMTA1
DPYSL5
DNAH1
COX8A
TM9SF1
IPO4
SPRING1
RNFT2
PRPF38A
ORC1
EXOSC5
BCKDHA
PITX3
GBF1
SORBS2
PPP1R15A
SMARCAD1
PLEKHA4
CALR3
C19orf44
BIK
LMNA
DTX4
ABCG1
TMEM109
PRPF19
VGF
CNIH4
PI4K2A
KATNB1
E2F1
DTD2
MORN4
GNB2
PKNOX1
IFRD1
MID1
ZBTB38
ZNF189
MRPL50
ZMAT2
HARS2
HARS1
C1orf189
PANK2
TSPYL1
ERCC6L2
CDK5RAP3
POLRMT
EMC3
PDXP
FGF22
GADD45A
SCOC
MTCH2
MEX3B
GOLGA5
USP1
TCERG1
FOS
ZC3H10
DAD1
ABHD4
INTS4
ESYT1
ADAR
TRAK2
STRADB
SIRT4
PPP6R3
PHF12
MXD1
KRT23
SAC3D1
MTMR12
TENT5B
UBQLN4
RAB25
LAMTOR2
OCM
TCP11
UBR2
TLE3
JPT2
EGF
PUS7L
IRAK4
TMED7-TICAM2
TMED7
GADD45B
ACP6
BICRA
MAP2
RND1
PALMD
EEF1AKNMT
MAGI1
STRADA
PTP4A1
GLRA1
CNN3
CFAP20
DISP3
SRP14
ID4
SMARCB1
PUM3
BBS12
RAB8A
PRKAG2
SYP
PRICKLE3
STAP2
MPND
LMAN2L
CDC6
PCNX3
MAP3K11
WDR87
SIPA1L3
LARS1
ZNF513
MAP2K7
HIBADH
UBE2F
PDE4B
TRAF6
RAG1
PAIP2
ZFP36L1
XRCC5
RRBP1
SETD1A
ORAI3
CAMK2D
POLR3H
SPATA25
NEURL2
CTSA
SHANK1
CLEC11A
SIDT2
ZSWIM1
FBXL19
ANK2
CDK5RAP2
CX3CL1
VMP1
PTRH2
EIF3F
WDR19
MECP2
KANSL1L
PACSIN3
TCIM
SCHIP1
ARFGAP2
KMT5A
PCBP2
PKD2L1
SNRPD2
QPCTL
UBL5
FBXL12
TTF2
TULP2
NUCB1
NUMA1
LRTOMT
TNMD
FANCC
FRAT1
PCM1
OSBP
ZBTB6
DDX39A
RC3H2
PPP2R5B
ATG2A
ERCC1
E4F1
KIF3C
PGM2L1
PGP
NAA35
DGUOK
PSENEN
PROSER3
LIN37
IGFLR1
HSPB6
RPS26
PMM1
ZFHX3
TRIM48
MORF4L2
GOSR2
PDPK1
PTBP1
PSMC4
ZSWIM8
CHCHD1
ALK
U2SURP
POLK
CERT1
PGM1
CEMP1
PCYT1B
NEBL
NXPH2
TMEM114
GPBP1
MTRNR2L10
EFHC1
RPS5
MED25
FUZ
CRYBA1
BAHCC1
LPCAT2
PTTG1IP
SLC4A2
ZBTB5
RNF225
SRPRA
CDK5
ASIC3
ZNF584
SCRT1
DDX49
COPE
HSPA1B
EIF3L
ANKRD54
WBP2
PDK3
DGAT1
ARMCX4
EFCAB6
CUL3
SPRYD4
MIP
TBC1D23
RUFY3
TSPAN19
LRRIQ1
MGAM
TEX2
UBL7
PGAP2
BRICD5
BUB3
HMX2
CENPC
TSPAN17
RPS24
EAPP
ARMC12
RERE
C10orf120
FRMPD2
ABCA5
NR2F1
SDF2L1
HNRNPUL1
DUSP7
POLR3A
CCNG1
WIPI1
ACTN4
RACGAP1
EFR3B
C16orf91
RALGAPA2
SACS
NES
LRRTM3
PRR7
LRFN3
CHD2
MRPL17
ZNF138
ZBTB37
DBN1
TRAPPC6A
BLOC1S3
EGLN2
PPM1E
PPP4R3B
SASH1
SOX13
TMEM132B
PKIG
PARP16
BORCS6
ABAT
FABP7
RSF1
AAMDC
SMPDL3A
FOSB
RNF10
COQ5
TGDS
GPR180
ZNF417
DUSP6
TCF7L2
ZNF254
ANKHD1-EIF4EBP3
ANKHD1
EP300
ERICH6B
USP30
CD68
EIF4A1
GAMT
DAZAP1
GPR3
CD164L2
KDM4B
KBTBD7
RGS3
EPHX3
NARF
CYBC1
CRYGD
SDE2
TM9SF4
GRHL1
MRPL2
KLC4
CUL7
YIF1A
TMEM151A
PGLYRP2
WDR74
STX5
ITGB8
FAM98A
SLAIN1
NBPF1
SCAF11
KIF27
BRD3OS
TPH2
NEK6