ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
LIFR
BTBD11
KRT31
LGALS8
PTMA
ANKRD35
FAM227A
CBY1
KIAA2012
CELF3
RIIAD1
GABPB2
STC1
ALDH1A1
SRP68
MTF2
VWCE
BCL9
NOTCH1
EPYC
NTN5
USP3
APOD
LFNG
NAV2
GEMIN4
NDUFB5
MRPL47
CDX2
ARID2
MATR3
MED25
FUZ
PRSS23
PYM1
DGKA
RGS2
EPHX3
UGT1A6
ANKHD1-EIF4EBP3
ANKHD1
LINGO4
RPGRIP1
STK31
SERINC5
MAMDC2
ZSCAN2
ATXN7
SLC20A2
RPTN
LMO3
LRRTM2
CTNNA1
EPHX1
MPC1
SMARCA2
PRR15
GGH
TTC39C
FOXP1
USP35
KCTD21
GRK6
GALNT10
ANGPT1
TMPRSS15
KRTAP19-3
KRTAP19-2
KRTAP19-1
CDH12
NKD2
EIF3J
IQCH
AAGAB
KRTAP8-1
DUX4
ANKRD6
TAGLN2
LRRC72
TJP2
PIPOX
FGFR2
C1QTNF7
HDAC4
CLDN11
HMGB1
SLC12A7
SLC17A8
IFRD1
RLBP1
SEM1
ITGB8
SH3GL3
CYP1A1
CLEC4F
ZNF750
TMEM17
MANSC4
KLHL42
CYTH1
VAV3
SNAPC3
ABCB10
LINGO1
CEP85L
NPIPA8
NPIPA7
SLC2A11
DERL3
SLCO5A1
KRT86
TPRG1
CLEC9A
PLEKHG1
LSM5
AVL9
ETV3
FGF12
LRP12
RETNLB
TLX3
TLCD4-RWDD3
TLCD4
DDX17
RORC
C2CD4D
TARS3
SLC2A8
LIMK2
NTF3
PLPP2
ODC1
HAUS6
EHD4
MAPRE3
ETV1
TMCC1
ANKRD44
GCNT1
RSPH4A
ID3
COL14A1
HGS
ARL16
TES
RASAL2
TFEB
PGC
ZDHHC3
EXOSC7
SIPA1L2
KCNA6
PER2
EML2
POLI
ADCY10
H3C6
H2BC8
H2AC8
H1-3
AMN1
BCL2L1
CPLX2
SEMA4D
ARIH1
HAO2
ADAM28
MFGE8
PGRMC2
SECISBP2
ADAMTS17
ITGB3
SOX14
AP1M1
WFDC13
WFDC10B
KMT2B
HOXA9
HOXA10
HOXA7
LYPLAL1
SLC26A9
UNK
H3-3B
COA8
BAG5
PLA1A
MLLT11
CDC42SE1
CLOCK
C1orf56
CADPS
PHF5A
ACO2
LCA5
NMNAT2
ESYT3
KLK12
UGT1A4
RNF217
UGT1A5
KRTAP3-2
KRTAP3-1
WSB2
BAHCC1
TGFBI
FBXL19
MYC
H1-7
OR4N4
CEMIP2
FMN1
APP
ZNF775
PPFIBP1
GLI2
EIF2B2
AVEN
SMAD3
CCPG1
C15orf65
CLIP4
NUP160
ERCC4
TRIB3
SINHCAF
TNS3
INSIG1
TUBB2B
SH3BP4
CCDC57
CSTB
RRP1
MANBAL
CCDC3
TRIP11
H3C15
H3C14
KLHDC8A
H4C14
GRAMD4
CUEDC1
DPYSL3
NPY4R2
NPY4R
MAST1
RTBDN
EIF4A3
NUP153
CAST
TMEM68
TGS1
NARF
CYBC1
HEBP2
ESRRA
CATSPERZ
CHSY1
NADK
TOX
RYK
LAMC1
MARCKS
ANXA3
UACA
PRDX1
CLRN3
C3orf20
CCL24
MSX2
TRPC3
CLUAP1
C16orf90
DYRK4
YEATS2
H4C15
HDAC9
EPAS1
WFDC8
MSANTD4
PMEPA1
KIAA0040
ZNF335
ERG
TSKU
CHD1L
PRKAB2
HLF
FGD4
KDM2A
HAUS5
SRRD
HPS4
ARHGAP24
GTF3C3
C2orf66
MAD2L1BP
GTPBP2
CCT2
ZFC3H1
THAP2
LMNA
AUH
MAST4
LOC100506422
ETV6
PPARGC1A
CHRM3
SDK1
RFLNA
VGF
NAT16
IL21
ZNF444
SYNE2
ONECUT2
TBX4
ACTN4
SLC33A1
CHST6
SNCA
RNF20
CTSK
PTGR1
KRT23
NRCAM
ESRP1
GNL2
ZSCAN10
SEPTIN9
TMTC4
PLK2
ROCK2
GOLPH3L
TLE1
KDM3A
ATP8B1
CYREN
AKIRIN2
C6orf132
VOPP1
ZNF428
SRRM5
PTCH1
TNFSF15
NEDD9
PLN
CRLS1
MUS81
CFL1
CCDC174
MAP3K9
RFX5
MTUS1
MFSD4B
SHC3
ID2
UNKL
ECT2
HNRNPLL
NDUFS5
BORCS6
PPME1
C2CD3
HRH3
GPR171
LRATD2
CCT7
SPRY4
ZNRF3
TIGD6
HMGXB3
ANAPC4
ANKRD33B
TRIM48
RNF43
RAB23
AKAP1
CYP24A1
HTRA1
ICMT
HES3
NACAD
MRPL36
NDUFS6
WIF1
TBL1XR1
KIZ
ZNF195
ITGB4
ZKSCAN1
SPEG
DISC1
EGFLAM
ENTPD7
POLB
HMGN1
ZMAT4
ZNF687
HCRTR2
DCPS
CEP68
KIF13A
PCED1B
AMIGO2
CDC42SE2
SIX2
EXOSC2
NRP2
KLF6
SOX8
LMF1
DNAJC21
BRIX1
HOXB9
CDH18
CEP20
TPD52L1
FAM20C
ZNF608
REG1A
LCE3B
LCE3A
FURIN
FIGLA
FRA10AC1
CAV2
OR1K1
FOXP2
ATP6V0D2
C1orf100
CSK
RIN2
ZBTB6
RC3H2
SRGAP2B
SRGAP2C
ATXN1
SH2B2
LRP1B
SLC39A8
LTBP1
NDE1
MARF1
DSP
PI4KB
CGN
VTI1B
IL31RA
GRXCR2
PLCH1
MEX3D
UBTD2
TRIB1
CIT
ATP8A2
ZBTB45
TRIM28
USP39
C2orf68
LTK
PDZRN3
AGPS
KCNN2
PDP1
PLA2G4B
JMJD7-PLA2G4B
JMJD7
SDC1
RFX8
CLCF1
HERC3
COX20
KNTC1
BCL2L11
DUSP12
CYTH2
BEST1
ADD2
EIF4EBP1
FTH1
ASPSCR1
NOTUM
PDIK1L
ZFP69B
NPIPA1
PGK1
PDIA6
AKAP6
UCP2
NUCKS1
MACROH2A1
OAZ2
PSMB7
GOLGB1
TMEM128
ARFGEF1
VCAM1
STON1-GTF2A1L
SYBU
CEMIP
STON1
ABHD11
TPST2
XRCC5
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
FIGNL1
TNFAIP2
CRTAP
SLC25A36
TIAL1
DPP3
ST6GAL1
POU3F2
DDAH1
SRI
PLOD2
ACVR1B
TAS2R50
CPA5
POU2F3
SRGAP1
ACTR2
FGF1
ETV4
MPZ
SDHC
CXCL5
CPT1A
ELF1
UTP25
WBP4
RNASET2
TRAK2
STRADB
CDK5R1
RSF1
AAMDC
KCNF1
CYB5A
POGZ
RPS11
RPL13A
PIF1
TLR4
STXBP6
NCF2
PCTP
SLC7A1
STRIP2
GADD45G
NOTCH2NLC
SHF
NOTCH2
F11R
SNX27
HHIPL2
DCSTAMP
MBLAC1
SNRPN
SNURF
TMEM132A
ZNF106
SNAP23
QKI
TMEM211
ADH5
DST
CRISPLD1
S1PR3
MTHFD2
C9orf47
LIMCH1
CAPRIN1
SLC25A25
LMCD1
PIK3R3
TLE3
TRPM1
LAP3
H3C8
H2BC10
FNBP1L
FOXJ3
H4C8
S100A10
TRIB2
CTSV
RHOJ
LGALSL
SEMA5A
ARL10
SPATA12
IGFL4
IGF1
PGLYRP1
SNTB2
CHN2
CPVL
TTPA
HSPA1B
TENT5A
ZSWIM7
TTC19
HSPA1L
HSPA1A
IL17RD
KANSL1L
PDIA4
PHIP
CCND3
TAF8
SC5D
LAMP1
STX6
DMRT3
ATP13A3
ZNF304
MAML2
KRT77
PYGB
ZDHHC14
HACL1
BTD
DNAI2
MDM4
OR52N1
ARNT
WDR3
GDAP2
CDKN2B
MIOS
ZBTB40
C1GALT1
SEC31B
SCN1A
CYP4Z1
SPRED2
MYEOV
CADM1
SLAMF8
ATP10B
TLN2
TM4SF20
LAMTOR1
ANAPC15
CEP63
ANAPC13
CDKAL1
PHB2
IFNA2
TNRC18
LOC100129484
COL4A2-AS2
PCDHB9
PCDHB8
PCDHB7
PCDHB16
C2CD5
JUP
MANSC1
BORCS5
EMP2
ZNF736
RAP2B
TRMT2A
RANBP1
OR2H2
ANKK1
CORO7-PAM16
CORO7
HMOX1
PSMG2
ACSL6
MRO
CEP76
SLC30A8
FBXO48
APLF
PADI1
KPRP
CLIP1
PTPRO
ALDH1B1
SEMA6C
AKR1C2
ITPRIP
DLX5
CNIH4
RGS20
FGF3
KLF7
TCF12
CORO1C
POLR2M
SMIM35
TMPRSS4
SHOX2
NAA40
RSRC1
DNAJB2
DOCK8
LMNTD1
SLC10A7
MRLN
ASB5
CITED2
NEK6
SLC25A11
RNF167
PFN1
GP1BA
SDHD
TMCC3
RAET1L
GSN
GATA3
ILF3
SLC25A27
CYP39A1
CDC42EP3
VANGL2
CATSPER3
CNTN1
EFNA4
EFNA3
TTI2
OAZ3
ICOS
AGTPBP1
EMSY
NID1
TMEM88B
ANKRD65
NPTX2
OR10S1
CHMP4C
TENT5B
RCC2
ERV3-1-ZNF117
ERV3-1
ZNF117
RPA3
AKNAD1
POC1A
UCK2
LCE2D
UBR2
PCYOX1
FOXJ1
FGF19
TIA1
SHROOM3
AGPAT3
UNC93B1
ALDH3B1
SH3KBP1
SLC9A1
FANCA
SELENBP1
NTRK2
SYT2
LINS1
ASB7
SV2C
IBTK
HES1
PIMREG
AIPL1
GSPT1
ADRA2C
OR2T1
ST7
MNAT1
FKBP9
SIX4
CPT1B
CHKB
CACHD1
MCCC1
TSGA10IP
RPIA
TWIST2
LNX1
ZNF704
MTURN
PSEN2
USP54
SH3D19
AMELX
SHQ1
GPC1
MYOZ1
PRKX
TK2
CCDC187
EIF4A2
BBS7
SYNE3
ARHGAP5
OR5AP2
SERTAD4
FGF18
HSF2
VASH2
NEFH
OTUD7B
FANCF
MUC15
UBOX5
FASTKD5
FAM83A
KCNH8
MID1
KLF5
RAI14
ZDHHC5
CLP1
ZNF292
NR2E1
RAB12
SEC24B
ZSWIM3
ACOT8
H2AC19
H2AC18
RBM20
RPL27
IFI35
CALM3
HCN4
HSPB3
GSAP
DRD4
KRT74
BRD4
SCT
CDHR5
ARID5A
ADRM1
TUBA1C
MCM7
AP4M1
VDAC2
PTP4A3
HSF1
BOP1
TRIM61
ZNF395
ABLIM1
NFIX
RRBP1
KLHL24
ETS2
LDB1
PRDM10
SLC16A5
SST
LOXL4
CBFA2T2
TMEM41B
SPHK1
PIN4
AFAP1
LOC389199
PDE7A
NIPSNAP1
ZNF184
DNMT3A
LHX5
ST8SIA1
GRAMD2A
C11orf91
CCDC186
TDRD1
METRNL
GBX2
RCN1
SMCO1
UPF1
MFSD6
TNRC6B
SF3A2
PLEKHJ1
WASF1
CDC40
TCIRG1
NDUFS8
KDM5B
DENND4A
CCT5
PRUNE1
MINDY1
TBC1D14
CHD6
FILIP1L
FMNL2
TRIM13
TPM1
LMO4
ARHGAP8
ZNF346
ANP32E
PRR23D2
PRR23D1
CXCL13
CD59
IFT80
CTTNBP2NL
MIDEAS
RNF187
DEFB110
SMC4
ZNF680
EMP1
GFRA3
MYPN
SYNCRIP
ANK3
RABGAP1L
TNFRSF11B
COLEC10
CEP164
OTULINL
TCF4
PCBP1
OGA
AKAP9
ESR1
IP6K2
PTPN3
BHLHE40
FANCI
C18orf21
ANXA2
USPL1
MPIG6B
LY6G6C
LY6G6F-LY6G6D
LY6G6F
LY6G6D
MRPL42
MS4A2
CLK3
SYT7
EDN3
PAK6
MOB3A
IZUMO4
CPSF4L
TBC1D31
SPRING1
RNFT2
CHST12
SLC22A16
OPN3
CHML
OR10H1
ZSCAN9
CSRNP2
CCDC80
THEMIS
CHRNA9
BNIP5
G3BP1
INSM1
EYA1
BAIAP2
MT1X
GFM2
ADAM19
QSOX2
HUNK
SGPP2
KRT8
ZBTB2
LPP
PTPRD
CDIN1
SLC7A11
SLC26A8
PHKB
ITFG1
LYRM1
DCUN1D3
MAPK14
PTGES2
PANK1
ARHGAP39
PATL1
INTS9
HMBOX1
PKNOX2
AKIRIN1
MAP2