ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
THOC3
DUX4
MANBAL
MAMDC2
NAV2
FAM227A
CBY1
NOTCH1
LFNG
SINHCAF
PYCR2
RPGRIP1
HMGB1
KRT31
PLPP2
MED25
FUZ
NDST1
KDM2A
FRG2C
TJAP1
NDUFB5
MRPL47
TGIF1
MTF2
PHYHD1
DNM1L
PTMA
NEUROD1
LOC102724770
DGCR6
CCL24
ZSCAN2
NEK6
MYEOV
TMEM88B
ANKRD65
SNX16
SMCO1
DPP3
ARIH1
ERG
CLCF1
PLSCR2
SCGB1A1
KMT2B
FGF19
ESRP1
WDFY2
FRG2
ARID2
KRT1
FHL2
ITGB4
WDR74
STX5
CHST6
MTDH
MCCC1
ISL2
TINAGL1
PHF5A
ACO2
LYPD1
SPINT1
MUC1
TIAF1
MYL12A
LIMK2
PPP1R13B
FBXL19
VWCE
CPSF4L
DUSP1
EPHX1
CNP
SMIM3
TRIM48
DISP3
SLC16A6
ARSG
MEIS3
TMEM205
RAB3D
CCDC159
RDX
SIX2
JUP
ADAM28
F11R
CHD6
KLF7
PHAX
ALDH7A1
OLFML3
DDX17
ZNF775
ZNF503
CAPNS2
IQCH
AAGAB
SH3GL3
TCF12
RFLNA
CCT2
KIF6
GALNT10
GLI2
CEP41
ERGIC2
FMN1
CNTN1
SRI
ONECUT3
CPT1A
PCYOX1
TIA1
KCNN2
CYTH2
VASH2
MUS81
CFL1
POLR3E
HIPK1
ETV1
OTUB2
LEMD2
PEDS1-UBE2V1
PEDS1
HNRNPDL
ENOPH1
N4BP1
DST
CAPRIN1
SOX5
EP300
NUP160
NDUFS5
ESRRA
CATSPERZ
SLC16A13
SLC16A11
CCDC200
ASB2
ERCC1
OAZ2
PLEKHA3
FKBP7
PTHLH
LRRC25
CUEDC1
CPNE2
UNK
H3-3B
HOMER2
IFRD1
MS4A2
YWHAZ
SHF
KLK6
MAP3K2
GRK6
SPHK1
PSG1
PELATON
PMEPA1
CCDC57
SOX6
COL23A1
C11orf58
KIF26B
HNRNPC
ZFC3H1
THAP2
POLB
CYP1A1
ZNF268
COL17A1
UGT1A6
ZSCAN9
SLC25A25
ZFAND3
TTF2
STEAP3
TMTC4
ZNF428
SRRM5
LTBP2
COL21A1
PER2
WEE1
ZDHHC3
EXOSC7
NAP1L4
CDH13
RHOBTB2
TLK2
AHNAK2
SLC33A1
PIMREG
AIPL1
TIAL1
SLC26A9
H2BC4
H2AC6
TMEM41B
SUFU
ACTR1A
EFHC1
CDCP2
ZNF506
ITGB1
S100A6
SUN1
ST8SIA1
ABCC10
LPIN1
SYNCRIP
PADI2
ITGA6
VAMP8
VAMP5
BCAS2
COL4A2-AS2
SLC50A1
EFNA1
SIPA1L2
STN1
RSF1
AAMDC
CDC42EP3
SLC34A1
PFN3
TNRC18
LOC100129484
SLC25A36
PPP1R10
MRPS18B
ATAT1
ETNK1
DMRTA2
HID1
TRPM1
NPIPB12
TJP2
GPR39
EXOSC2
C1orf116
PDIA4
RBM39
PDP1
ABCC1
SRSF7
ETV5
MUC3A
TENT5C
FXR1
PNMA8A
NPIPB5
ZNF195
EXOC5
AP5M1
PRR14
FBRS
ASMTL
ETFRF1
CFAP94
SHISA7
TSPAN14
C6orf132
UBTD2
BMF
ARHGAP5
EPB41L4B
NASP
SLC2A4
HES1
ACOT1
TTC13
ARV1
MEF2C
DNAJC21
BRIX1
KNTC1
TNFRSF21
NPIPA3
NPIPA2
ZNF608
ONECUT2
PIN4
SLC7A5
NTF3
ZDHHC5
PLA2G4B
JMJD7-PLA2G4B
JMJD7
LAMC1
FBXO32
FGF1
IVNS1ABP
SOX2
OPN5
PPP1R37
MICALL1
EIF4A2
ADRM1
RNF31
PSME2
PSME1
EMC9
OR7C1
OR7A5
OR7A10
MAFK
MAST1
RTBDN
EIF1AX
ATP6V0D2
ACP6
LBH
TMCC1
MNT
PRORP
PPP2R3C
CNIH4
CLDND1
CSRNP2
GSTA3
KIAA0040
PRDM2
TRIB1
NPIPB8
TMEM200C
DHRS3
RALGDS
C15orf40
AKNA
RBFOX2
CTSV
ZNF627
LOC100509620
MYL12B
DOCK5
HMGN1
ZNF37A
NTN5
PGBD2
CAST
MXD1
UBR2
WDR36
CTDSP2
CHD1L
TBC1D31
LYRM1
DCUN1D3
PRKAB2
STK24
FOXO6
LNX1
RBBP6
G3BP2
CSTB
RRP1
ID3
MAST4
ABCC2
ACSL6
SDC1
GDF5
CEP250
CASQ2
SLCO5A1
ERV3-1-ZNF117
ERV3-1
CLDN4
RASAL2
LMNA
MARCKS
S100A16
S100A14
RAPGEFL1
EAPP
HSPH1
RRBP1
FAM83G
CSDE1
PLA2G6
RIPOR1
ZBTB6
RC3H2
SRSF6
KLHL2
PBX2
GPSM3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CCT7
ZNF436
FZR1
H3C15
H3C14
PDE4DIP
H4C14
GREB1
ZBTB37
DOHH
ZMYM1
IRAG2
NRCAM
DHX32
TES
ADAR
MBNL1
TAX1BP3
EMC6
SLC41A3
FAM83B
GSN
C2CD5
CEP63
ANAPC13
ETFBKMT
CTSB
NEBL
PTX3
MOB3C
MKNK1
PDE4D
TOP1
VDAC2
DGLUCY
PIGX
CEP19
RABEP2
CD19
CDKAL1
C16orf74
SRBD1
C1QTNF7
SPAG4
ATAD3A
GPR158
HLTF
MCM7
AP4M1
LSG1
ARNTL2
GCHFR
C15orf62
PLEKHG1
NWD1
ANKRD40
GADD45A
KRT6A
CD55
SMAD3
RAPGEF5
WDR33
ZSWIM4
POU2F1
NCOA4
HNRNPU
MT1F
MT1B
LCA5
SNAPC3
MSANTD4
CCDC88A
MFGE8
PHACTR2
TMEM107
MAP3K9
EXD1
CHP1
TEX9
RFX7
TMUB2
ENKUR
HEXIM2
CHD9
MTRNR2L2
MSH3
DHFR
KDM3A
TLX3
PIF1
ANKRD33B
GGPS1
ARID4B
S100A5
S100A4
S100A3
RIOX1
SLC25A27
CYP39A1
PSME3IP1
RSPRY1
ANO1
NFATC3
GNA13
MTA3
KCNG3
TSPAN13
GSG1
PTPN12
DDX5
CEP95
POLG2
ALPK2
OGA
SPATA12
CX3CL1
VARS2
GTF2H4
LDHD
PAQR8
SPRY4
SLC2A8
STRA6
ZNF763
RASGRF1
KCNK15
H4-16
H2AJ
NR1D1
GET3
SEPTIN9
BAHCC1
FLYWCH1
ADGRG7
NPIPB3
DDR1
NOTCH2
ZMAT2
KLHL38
HARS2
HARS1
SMCP
THAP10
LRRC49
MEX3D
CHD8
CREM
DCBLD2
RTN4
PWWP2A
ARF4
PSMB7
KMT5B
DCLRE1B
AP4B1
NPIPB13
MYOF
MIDEAS
NFE2L2
ZNF669
YLPM1
PHRF1
EXPH5
PTPRH
KMT5A
SPAAR
HRCT1
VPS50
HEPACAM2
TRAPPC6B
PNN
TP63
CD248
AMN1
CYP2S1
BORCS6
EEF1AKNMT
HAO2
DENND4A
NIBAN2
SLC25A21
BRMS1L
RNF13
TNS4
CDKN1A
CORO2B
ARID5A
ANKRD12
DTD2
CDCA4
FAM193B
STAG3
GPC2
GAL3ST4
CCND1
CA5B
HOPX
LOC100505841
MAGOHB
RNF103-CHMP3
RMND5A
TNFAIP8
SLCO1A2
BCL2L11
SF3B5
FAM107B
KLRF2
CLEC2B
PYGB
WSB2
WDR54
C2orf81
ENTPD6
M6PR
KLRG1
ARPP19
ZFHX3
NDUFS2
ADAMTS4
CEL
CCNB1IP1
PARP2
CTXN3
CEP20
LARS1
PLCXD2
SOX21
SACS
SMARCA2
NES
MTRNR2L8
PIPOX
CDX2
SPRED2
PLAGL1
GAST
METTL11B
SMAD7
LRRN1
LRRC10B
DNMBP
CADPS
ATP1A4
REST
OTX2
HDAC9
AGO1
LMCD1
CACHD1
ARHGEF38
ANKRD1
NR5A2
LRRN3
TERF1
SOCS3
TMPRSS11E
CD82
FLVCR1
DUSP6
DNMT3B
ITGB8
MUC4
KLHL7
WFDC8
NTRK2
OR5AR1
TENT5B
GLRA1
NRG1
PPBP
PF4
BCOR
TNNI3K
FIGNL2
MTHFD1L
RMND5B
SPATA45
RPH3A
KIF21A
BDH1
TDGF1
PIM2
ID1
FGD4
SFRP2
GDF11
DPPA5
ZBTB8OS
RBBP4
APBA2
ATP8A2
ZNF483
MOBP
TARS1
SMPD1
URM1
GNAI1
CD99L2
TCF7L1
LRRC2
SERINC5
SLTM
SNRPN
GAS1
ITPRID1
BTG2
STON1-GTF2A1L
RNASE6
C1orf127
USP44
SSB
LZTS1
DMXL1
FGFR2
EDDM3B
CELF3
TALDO1
SHCBP1L
SHC1
FLAD1
CKS1B
HOXB1
FGD3
MLEC
APOBEC3F
RIIAD1
SGK1
PPP1R16B
TRIM2
ABHD11
FAM222B
RIPK1
RNASET2
C9orf85
ICMT
HES3
KIF5C
CLDN9
BCL2L1
MTRNR2L1
GBX2
ETV4
PUF60
PHC1
GIMAP5
SAMHD1
CDC14B
GXYLT2
CLDN6
CRYAA2
CRYAA
PDPN
GOLGA6D
RCN1
TREX1
SHISA5
GADD45G
SCN5A
MID1
PRICKLE1
ZSWIM3
ACOT8
GLYATL1B
ZBTB40
ABHD17B
OBI1
FAM174B
GSX2
VCAN
ITPRIP
SRRM4
TPH2
NANOG
HESX1
GAD2
CBFA2T2
TMEM47
BFSP1
RPS24
PARP1
PREX2
FZD2
PHLPP2
NFE2L3
SAMD5
CRH
LIN28B
SNURF
GPRC5B
ZNF398
CDYL
SCGB3A2
UQCRHL
POSTN
CA6
TMEM70
PGPEP1
NADK
TEKT3
PALM2AKAP2
FBP1
TRIM24
ASXL3
SLC36A2
LRRTM3
MFSD4B
TUBB2A
LDB2
TESK2
PPP1R16A
ECE1
RFX4
FBXW11
KIAA2012
KDR
SORBS2
ZEB2
TMEM167B
MTM1
TRAPPC8
PSMD9
HPD
NAA50
CAMTA1
ATP6V1A
MRPL20
VENTX
UTF1
LY96
FOXH1
HSCB
CHEK2
FGF12
LIMCH1
FAM120B
TIMP4
WDR49
CSAD
TBC1D16
DLL1
SYT2
CHN2
FOXB1
TNC
SGPP2
NCDN
KIAA0319L
LINGO1
ZNF740
SASH1
GOLGA6A
VIM
SALL4
ZCCHC3
C20orf96
DCAF4L1
RGS3
MMACHC
FRAT2
SLC30A9
SH3GL1
CHAF1A
ANKRD6
NFE2L1
RASGRF2
ARAP3
C1orf100
GJA1
BTBD11
KCNJ1
PSIP1
SOX14
TOMM40
FOXP1
LHPP
DOK7
ST18
GSAP
GPR85
MORF4L2
POU5F1
HGS
ARL16
GNAI2
MAD2L2
DRAXIN
SYBU
SELPLG
ACVR1
TTYH1
BUB1
SCARB1
HBG2
HBG1
SALL3
EPHB3
MFHAS1
MDN1
GPC4
IER5L
TPST2
TRIB2
TBC1D14
FBXO40
PSMG3
ITGB3
ITGA2
IFT80
ZNF343
SH3BP4
CCBE1
ZSCAN10
SERPINA1
OSBPL1A
FZD8
MED12
IL2RG
GOLGA6B
SMYD2
OR2T1
ENSA
CNN3
SCAF4
IGFL3
HOXD11
HHIP
PALLD
BEND3
GOLGA6C
CREB5
ZNF18
KIFBP
NEDD9
CDH18
P2RY12
FGF2
PTBP2
CTNND2
PTPRN2
CERCAM
TOX3
RASA1
MYCL
ZYG11A
GDF3
SMC6
GEN1
GCNT2
ETS1
SLC20A2
HMOX1
FAM180A
ADAMTS18
LRRTM2
CTNNA1
URGCP
CELF4
ZNF335
NBPF15
HOXD13
HOXD12
PNRC1
FBXL14
CITED2
PDCL
KDM2B
EXT1
CRYGB
TUBB
MDC1
SLC35A5
ATG3
PRRC2B
PRR15
PDHA2
EPB41L1
BICD1
ATXN7
DICER1
TMPRSS7
GPR31
TCF4
PEAK1
HMG20A
FYN
WNT5B
MKRN1
ZBTB45
ERMN
B3GALT5
BCL9
CPA2
PRKG1
GCSAM
SYNDIG1
CHRNA1
PLEKHB1
ANXA2
URGCP-MRPS24
DAGLB
MYSM1