ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX968911 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◣ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

WDR74
STX5
MAMDC2
PLAGL1
BFSP1
NES
NRARP
LOC102724770
DGCR6
DUX4
CRYAA2
CRYAA
FOXB1
UNCX
GAST
RBFOX1
SOX21
METTL11B
ITPRIP
GXYLT2
NKX2-2
IGFBP2
SACS
SIK1B
SIK1
MTF2
LRTM1
CAMTA1
TRIM48
CRABP1
ADAMTS18
PGPEP1
DDX17
PIK3C2A
PGK1
SOCS3
FAM227A
CBY1
MED25
FUZ
PTPRZ1
DTX4
EAPP
ALDH2
FAM222A
ADAMTS9
LGI1
TP53INP1
DNMBP
OSBPL2
PBX2
GPSM3
ITGA2
LFNG
SCN5A
ME3
NOTCH1
TMEM167B
TAF13
ATP1A4
DTNA
KDM2A
MS4A4A
PAFAH2
MUC20
SIRT4
ARHGEF4
HDAC9
NR4A3
CNTFR
DNMT3B
CD300LD
C17orf77
LMNA
MEX3A
IQCH
AAGAB
TTYH1
C1orf198
MEF2A
SND1
DCT
NR2E1
LRRN1
KLHL7
TNRC18
LOC100129484
CSPG5
EMID1
TRIM62
STON1-GTF2A1L
ADAMTSL1
NFASC
MBNL3
GLIPR1
SOX2
OSBPL1A
NSD2
LETM1
RBM20
SORBS2
TNP2
PRM3
PRM1
PRTG
EFNA5
NDUFB5
MRPL47
NDUFS5
SLC28A1
PTPRJ
LZTS1
SPHK1
FAM181A
PARP16
MSI1
RUNX1T1
ART1
RGS3
SCARB1
DICER1
MMP10
CRB2
WDR36
PIMREG
AIPL1
TAF12
FSIP1
SRRM4
TMEM143
SYNGR4
TCIM
CHN2
GPC4
KANK1
CRYBG2
CCDC200
TMPRSS9
POLDIP3
GFRA1
ABCB4
PRDM12
PTMA
COL4A2-AS2
FZD9
URM1
PLEKHB1
C1orf127
PPP1R16B
SYTL2
ITPK1
ADAMTS14
SYNCRIP
ONECUT2
DUSP6
UQCRHL
SEMA5B
PRR16
CFLAR
CHD1
CERCAM
EEF1A1
ZNF496
RPGRIP1
FAM107A
WNT2B
ID2
C21orf62
ANKRD6
AGO1
GAS2L3
NAV2
SMARCA2
MTRNR2L8
PIPOX
CDX2
SPRED2
SOX6
HMGB1
SMAD7
LRRC10B
COL17A1
ZSCAN2
CADPS
MUC1
REST
OTX2
LMCD1
CACHD1
ARHGEF38
ANKRD1
NR5A2
LRRN3
ID3
TERF1
TMPRSS11E
CD82
FLVCR1
ITGB8
MUC4
MUC3A
ZFHX3
WFDC8
NTRK2
IFRD1
FGF1
OR5AR1
ARID2
TENT5B
GLRA1
NRG1
PPBP
PF4
GRK6
BCOR
TNNI3K
KRT31
FIGNL2
MTHFD1L
RMND5B
ZNF608
SPATA45
RPH3A
KIF21A
BDH1
TDGF1
PIM2
ID1
FGD4
SFRP2
GDF11
DPPA5
ZBTB8OS
RBBP4
APBA2
GSN
ATP8A2
ZNF483
MOBP
ETV1
TARS1
SMPD1
GNAI1
CD99L2
TCF7L1
LRRC2
SERINC5
SLTM
SNRPN
NRCAM
GAS1
ITPRID1
UGT1A6
BTG2
ZNF436
GLI2
RNASE6
USP44
SSB
ADAM28
DMXL1
FGFR2
EDDM3B
CELF3
TALDO1
SHCBP1L
SHC1
FLAD1
CKS1B
HOXB1
FGD3
MLEC
APOBEC3F
RIIAD1
SGK1
TRIM2
ABHD11
FAM222B
RIPK1
LCA5
ZNF775
RNASET2
C9orf85
ICMT
HES3
PLPP2
KIF5C
CLDN9
BCL2L1
MTRNR2L1
GBX2
ETV4
PUF60
PHC1
GIMAP5
SAMHD1
CDC14B
MTRNR2L2
MSH3
DHFR
CLDN6
PDPN
GOLGA6D
RCN1
TREX1
SHISA5
GADD45G
MID1
PRICKLE1
ZSWIM3
ACOT8
CYP1A1
GLYATL1B
ZBTB40
ABHD17B
OBI1
FAM174B
GSX2
TMCC1
VCAN
SMCO1
DHX32
TPH2
NANOG
SNX16
HESX1
GAD2
SLC7A5
CBFA2T2
TMEM47
RPS24
PARP1
PREX2
FZD2
PHLPP2
NFE2L3
SAMD5
CRH
LIN28B
SNURF
GPRC5B
ZNF398
CDYL
SCGB3A2
POSTN
CA6
TMEM70
NADK
TEKT3
PALM2AKAP2
FBP1
TRIM24
ASXL3
SLC36A2
LRRTM3
PER2
FZR1
MFSD4B
TUBB2A
LDB2
TESK2
PPP1R16A
ECE1
RFX4
FBXW11
KIAA2012
KDR
ZEB2
AMN1
MTM1
TRAPPC8
PSMD9
HPD
NAA50
ATP6V1A
PHF5A
ACO2
MRPL20
VENTX
UTF1
LY96
SMAD3
FOXH1
HSCB
CHEK2
FGF12
DDR1
LIMCH1
PMEPA1
FAM120B
TIMP4
KMT2B
WDR49
HOPX
CSAD
TBC1D16
CCT2
DLL1
SYT2
ESRP1
TNC
SGPP2
NCDN
KIAA0319L
LINGO1
ZNF740
SASH1
ZFC3H1
THAP2
GOLGA6A
VIM
SALL4
ZCCHC3
C20orf96
DCAF4L1
COL23A1
MMACHC
FRAT2
SLC30A9
SH3GL1
CHAF1A
NFE2L1
RASGRF2
ARAP3
C1orf100
GJA1
TMEM41B
BTBD11
SIPA1L2
KCNJ1
PSIP1
SOX14
TOMM40
FOXP1
LHPP
NOTCH2NLC
DOK7
FBXL19
ST18
GSAP
GPR85
PYGB
MORF4L2
POU5F1
RASAL2
HGS
ARL16
GNAI2
SPRY4
MAD2L2
DRAXIN
SYBU
SELPLG
ACVR1
BUB1
HBG2
HBG1
SALL3
EPHB3
STN1
MFHAS1
MDN1
PLEKHG1
IER5L
TPST2
SOX5
TRIB2
MCCC1
TBC1D14
FBXO40
PSMG3
ITGB3
IFT80
ZNF343
SH3BP4
GET3
CDC42EP3
CCBE1
ZSCAN10
SERPINA1
FZD8
MED12
IL2RG
GOLGA6B
SMYD2
OR2T1
ENSA
CNN3
CYP2S1
SCAF4
IGFL3
HOXD11
NDST1
HHIP
PALLD
KCNN2
VWCE
BEND3
GOLGA6C
CUEDC1
MANBAL
DGLUCY
CREB5
ZNF18
KIFBP
FRG2C
CYTH2
NEDD9
CDH18
P2RY12
FGF2
PTBP2
CTNND2
SHF
SLC34A1
PFN3
TES
PTPRN2
RBFOX2
TOX3
RASA1
MYCL
ZYG11A
C1QTNF7
GDF3
NOTCH2
SMC6
GEN1
GCNT2
ETS1
H3C15
H3C14
SLC20A2
HMOX1
FAM180A
FMN1
LRRTM2
CTNNA1
URGCP
LIMK2
CELF4
ARIH1
ZNF335
NBPF15
HOXD13
HOXD12
PNRC1
FBXL14
CITED2
PDCL
KDM2B
CEP41
EXT1
CRYGB
TUBB
MDC1
SLC35A5
ATG3
PRRC2B
PRR15
PDHA2
EPB41L1
BICD1
ATXN7
TGIF1
TMPRSS7
GPR31
TCF4
PEAK1
HMG20A
FYN
PHAX
ALDH7A1
WNT5B
MKRN1
ZBTB45
ERMN
B3GALT5
BCL9
CPA2
PRKG1
GCSAM
RTN4
OLFML3
SYNDIG1
CHRNA1
ANXA2
URGCP-MRPS24
DAGLB
HES1
TRPM1
PDE4D
MYSM1
CAPRIN1
PRDM14
NUAK1
SFRP1
KIAA0895
THOC3
SRSF7
SNAPC3
IL34
REV3L
ATG10
SLC39A8
CTBP2
UNC13B
PCBP1
PSEN2
LYPD6B
LIFR
CER1
HSPG2
LEFTY2
PHTF1
FRY
FOXA2
CTIF
NEUROG1
KIF6
BTBD10
ADAR
ANK2
LARP1B
MBNL2
CCN2
WDFY1
CCDC33
CCAR2
C8orf58
DGAT2L6
SOCS5
ERG
SYN3
GPM6B
RGPD2
RGPD1
ADGRL2
ANAPC4
DHDDS
WBP1L
NXPH1
SLA2
FOXD1
ABO
SGMS2
ADA2
NEK6
SRCIN1
CAPN3
L1TD1
NUAK2
ZNF304
CSK
NMNAT2
LGALS8
AGK
GABRB3
ANKRD35
NECTIN1
KNDC1
LRAT
OR6A2
MAP6
ECT2
ZNF536
DDX43
SMIM32
SULT6B1
BCAT1
WEE1
KDM3A
SLN
SEPTIN5
DACT1
PPP2R3A
ZNF532
NOTCH2NLB
NOTCH2NLA
SNX19
FAM219A
DNAI1
ABCB5
GTF2I
PSMG2
ALDH1A2
CARHSP1
CACNA1S
ASCL5
OCSTAMP
NCOA3
FOXP4
SDK1
AASS
DDX46
LIN28A
MACROH2A1
SLC33A1
TRIML2
VPS37B
PLA2R1
TRIT1
RIC8B
FXYD7
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
SPIRE1
PCYT1B
RARB
CHFR
HES5
ZNF296
PANK4
GEMIN7
ADGRD1
TJP2
DPH6
CXADR
NPSR1
STOX2
SEMA6D
NRBP2
DST
EBF2
AEBP2
VOPP1
SMIM14
ATF4
CHD6
GCNT1
USP7
GABBR1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
SPIN1
AHNAK
INO80D
DACT3
WDFY2
SLC10A2
SOX13
ATXN3
NWD1
TMEM132B
ZNF195
SRP68
KCNIP4
AUH
MAGEB2
UBQLN4
RAB25
LAMTOR2
UGP2
H2AC19
H2AC18
TEAD1
PRSS48
PACSIN2
FXYD5
ZBTB20
SLC2A8
ZNF770
PSME3IP1
FHL1
ZNF565
ZNF674
SLC66A2
MRS2
HSBP1L1
UHRF1BP1L
KRT6B
RAX
RNF43
BZW2
ANKMY2
TRNP1
NEBL
SLC46A1
LIPK
FEZF2
CRISPLD1
LRRTM4
FAM110D
MARK2
LHFPL4
LRIG1
TMEM170A
TCF7L2
ZNF781
PHC2
MOG
EFNB2
KMT5C
IL7R
COMMD7
IL17RD
ERVH48-1
NXPH2
PRODH
LOC102724788
NDUFV1
TRDMT1
ATP8B1
RBM22
PIN4
PKIG
CACNA2D1
TBC1D1
FOCAD
TMC5
SEMA4D
MAST4
NTN5
MCF2L2
STK31
ANKRD40
DUSP1
ABCC2
TUT1
MTA2
SEPTIN9
DPYSL3
MEIS2
MSANTD4
TIAM2
OCM
KANSL1L
PPP1R15A
DRD1
ITGB5
PLSCR4
GABPB2
MARCKS
DET1
MPP2
KCNMB4
SPHK2
ARID5A
GID8
DIDO1
TBC1D30
SENP2
PRR5L
TSPAN14
GABRQ
DHRS3
TCP11
PDE1B
LONRF3
FUS
SLCO5A1
EIF4A2
PPEF2
PITPNM2
BOD1L1
TMUB2
KLF7
BORCS6
G3BP1
ANGPT1
INSM1
SORT1
RAB15
EMSY
SPATA13
KLF5
FAM20A
PCNX2
PCDH1
ACOXL
KLF6
EOMES
OR5K3
SPATA22
EYA1
RAPGEF5
GMCL2
FRG2
ACSL6
SIN3A
DNTT
GALNT18
RMND1
ARMT1
CDC42EP4
AK4
RASA3
ZIC4
NRIP2
TNRC6A
PXMP4
ZXDC
TRPC4AP
FAM98A
ATP6V1G1
CELSR3
SEC14L1
ETFB
LBP
ESX1
TAGLN3
NDUFAB1
PHETA2
NAGA
TET3
UFD1
SMPDL3B
CDC45
IL21
FMNL3
ARMC12
IRAK1BP1
AASDH
FGF13
TMEM43
CHCHD4
TP53
SMN2
SMN1
WDR55
DND1
KRT8
UBR2
PRUNE2
BAIAP2
ETV6
CST1
ZBTB38
TRIM28
POLB
DPPA4
CRYBA1
SLC2A14
CHD7
ZNF814
TRMT10C
SYAP1
MT1HL1
ESRRA
CTPS2
CATSPERZ
TP53RK
FAM24B
GLDC
TMPRSS15
POU3F4
EPB41L2
SLC3A2
PCDHB9
PCDHB8
PCDHB7
PCDHB16
LEKR1
SLFN12
KLHL3
EPAS1
MFSD13A
C10orf95
PAK1
ROR1
PRSS23
NRROS
ADAMTS1
PCDHB5
PXDC1
ZNF189
SIX2
PTAR1
MRPL50
GHRH
ZIC3
PLEKHA5
ISOC2
LLGL1
ZBTB2
TRMT2A
RANBP1
RNF19A
FOXO6
FAM200B
ZFYVE1
ACSL1
WRAP53
OR2AT4
DDX11
ANXA3
SHC3
RNASE9
DSP
PAX3
TTYH2
ZNF428
SRRM5
CPA5