ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2731713 | Lung cancer cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◣ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

MAMDC2
HBB
HBD
CLU
HBM
HBQ1
HBA2
HBA1
C16orf46
DCN
MGP
SNORC
RPLP2
PNPLA2
PIDD1
SLBP
TRIM48
COMP
RPS6
PTPRN2
TMEM106C
RPS11
MTRNR2L1
TPT1
LUM
DUX4
RPL11
RPS19
CD79A
RPL32
RPL27
IFI35
GAPDH
GOLGA3
MIB1
LOC102724770
DGCR6
ZNF34
ZNF517
RPL8
PROK1
RAPGEF4
TTYH2
RPL38
RPL13A
RPL36
PRRG3
MCC
S100A6
S100A5
RPS9
OPTC
FGFBP2
RPS23
ATP6AP1L
RPL30
CLDN3
RPS8
FMOD
CNOT6
TAX1BP1
RPS15A
RPL19
CACNB1
KRBA2
RPL26
RPS27A
CLHC1
TRIM16L
FOXO3B
VPS52
RPS18
B3GALT4
LYPD4
RPS12
DMRTC2
RPL37A
RPL13
GTF3C5
NDUFA4L2
SHMT2
S100A8
RPLP1
RPS14
ZNF692
ZWILCH
SNAPC5
RPL4
UBA52
TMSB4Y
WDR38
RPL35
ARPC5L
DEFA1B
DEFA1
RNF24
SLC30A10
RPS16
PCNP
FTL
TMEM238
RPL28
S100A4
S100A3
TMEM190
RPL27A
TRAPPC4
RPS25
RPL10
DNASE1L1
TAPT1
S100A9
PGLYRP4
MBNL3
MEIS2
CORO2B
RPL35A
IQCG
LMLN
PIK3CB
FN1
SERPINA1
RPL37
CARD6
HLA-B
VWA1
ATAD3C
SLC22A16
SCRG1
ZNF302
BMPR1B
EEF1A1
GPX3
VIM
MED13L
RPL34
COL2A1
BTBD1
RPS3
DEFA3
MTRNR2L9
NOVA1
SLC5A1
RPL10A
RPS20
RNF225
RPL5
RPS5
TIMP1
SCGN
RBFOX2
S100A16
S100A14
S100A13
S100A1
CHTOP
SPHK2
RPL18
FAM83E
MIF
CHAD
SURF2
SURF1
RPL7A
MED22
RPS4X
AGBL2
RPS24
SULT6B1
RPLP0
GCN1
PRELP
SUPT5H
POLD2
AEBP1
RACK1
POLR3A
SERF2
SERINC4
HYPK
INKA2
RPL6
CPLANE2
MT1X
PEMT
RPL12
LRSAM1
SPATA33
PPP1R12B
CYTL1
BEST1
FTH1
HAPLN3
B2M
TSPAN9
CDH23
RPL14
HLA-A
GRAMD2A
RPS21
ATG5
RPL3
SPACA4
ZC3H10
RPL41
NAPRT
MROH6
MT2A
RPL31
C12orf73
TPM3
PSMC2
DNAJC2
ZNHIT2
MRPL49
FAU
TM7SF2
GNMT
ECRG4
CST3
TLCD1
RPL23A
RAB34
PROCA1
RNF169
NEK8
TMSB4X
RPL29
GSTP1
RPL24
ZBTB11
TMPRSS11A
MFGE8
RPSA
DPH3P1
FRG2
TMSB10
ALDH3B2
TOMM7
ACTB
IFITM1
IFITM3
RPS10-NUDT3
RPS10
RPL23
SERPINA3
RPS3A
HLA-C
TOR1A
USP20
C9orf78
BEST4
MTRNR2L2
MSH3
DHFR
C17orf98
OOEP
RPS7
OAZ1
FXYD2
RDH5
CD63
BLOC1S1
CCN2
DAPK3
EEF2
PPP1R27
MCRIP1
UBE2L6
PPIB
SNX22
TSSC4
SOD3
ALDOA
PPP4C
RPL39
ISLR
RAB4B
MIA
EEF1G
PFDN5
MYG1
APC2
RPS15
RPL7
RDH10
APOC1
APOE
NNMT
CILP
LDHC
ELL
SLPI
TBL3
RPS2
RNF151
NDUFB10
RPL3L
FBXO44
FBXO2
NRARP
MTF2
NAV2
SOX21
SACS
SMARCA2
NES
MTRNR2L8
PIPOX
LFNG
CDX2
SPRED2
PLAGL1
FAM227A
CBY1
GAST
WDR74
STX5
METTL11B
SOX6
HMGB1
SOX2
SMAD7
LRRN1
LRRC10B
COL17A1
DNMBP
ZSCAN2
CADPS
MUC1
ATP1A4
REST
OTX2
HDAC9
NDUFB5
MRPL47
AGO1
LMCD1
CACHD1
ARHGEF38
ANKRD1
NR5A2
LRRN3
ID3
PTMA
TERF1
SOCS3
TMPRSS11E
CD82
FLVCR1
DUSP6
DNMT3B
ITGB8
MUC4
RPGRIP1
MUC3A
ZFHX3
KLHL7
WFDC8
NTRK2
IFRD1
FGF1
OR5AR1
ARID2
TENT5B
GLRA1
NRG1
PPBP
PF4
GRK6
BCOR
TNNI3K
KRT31
FIGNL2
MTHFD1L
MED25
FUZ
RMND5B
ZNF608
SPATA45
RPH3A
KIF21A
BDH1
TDGF1
PIM2
ID1
FGD4
SFRP2
GDF11
DPPA5
ZBTB8OS
RBBP4
APBA2
NOTCH1
GSN
ATP8A2
ZNF483
MOBP
ETV1
TARS1
SMPD1
URM1
GNAI1
CD99L2
TCF7L1
LRRC2
SERINC5
SLTM
SNRPN
NRCAM
GAS1
ITPRID1
UGT1A6
BTG2
ZNF436
STON1-GTF2A1L
GLI2
RNASE6
C1orf127
USP44
SSB
LZTS1
ADAM28
DMXL1
FGFR2
EDDM3B
CELF3
TALDO1
SHCBP1L
SHC1
FLAD1
CKS1B
HOXB1
DDX17
FGD3
MLEC
APOBEC3F
RIIAD1
SGK1
PPP1R16B
TRIM2
ABHD11
FAM222B
RIPK1
LCA5
ZNF775
RNASET2
C9orf85
ICMT
HES3
PLPP2
KIF5C
CLDN9
BCL2L1
GBX2
ETV4
PUF60
PHC1
GIMAP5
SAMHD1
CDC14B
GXYLT2
CLDN6
CRYAA2
CRYAA
PDPN
GOLGA6D
RCN1
TREX1
SHISA5
GADD45G
SCN5A
MID1
PRICKLE1
ZSWIM3
ACOT8
CYP1A1
GLYATL1B
ZBTB40
ABHD17B
OBI1
FAM174B
GSX2
TMCC1
VCAN
SMCO1
ITPRIP
DHX32
SRRM4
TPH2
NANOG
SNX16
HESX1
GAD2
PBX2
GPSM3
SLC7A5
CBFA2T2
TMEM47
BFSP1
PARP1
PREX2
FZD2
PHLPP2
NFE2L3
SAMD5
CRH
LIN28B
SNURF
GPRC5B
ZNF398
CDYL
SCGB3A2
UQCRHL
POSTN
CA6
TMEM70
PGPEP1
NADK
TEKT3
PALM2AKAP2
FBP1
TRIM24
ASXL3
SLC36A2
LRRTM3
PER2
FZR1
MFSD4B
TUBB2A
LDB2
TESK2
PPP1R16A
ECE1
RFX4
FBXW11
KIAA2012
KDR
SORBS2
ZEB2
AMN1
TMEM167B
MTM1
TRAPPC8
PSMD9
HPD
NAA50
CAMTA1
ATP6V1A
PHF5A
ACO2
MRPL20
VENTX
UTF1
LY96
SMAD3
FOXH1
HSCB
CHEK2
FGF12
DDR1
LIMCH1
PMEPA1
FAM120B
TIMP4
KMT2B
WDR49
HOPX
CSAD
TBC1D16
CCT2
DLL1
SYT2
CHN2
ESRP1
FOXB1
TNC
SGPP2
NCDN
KIAA0319L
LINGO1
ZNF740
SASH1
ZFC3H1
THAP2
GOLGA6A
SALL4
ZCCHC3
C20orf96
DCAF4L1
RGS3
COL23A1
MMACHC
FRAT2
SLC30A9
SH3GL1
CHAF1A
ANKRD6
NFE2L1
RASGRF2
ARAP3
C1orf100
GJA1
KDM2A
TMEM41B
BTBD11
SIPA1L2
KCNJ1
PSIP1
SOX14
TOMM40
FOXP1
LHPP
NOTCH2NLC
DOK7
IQCH
AAGAB
FBXL19
ST18
GSAP
GPR85
PYGB
MORF4L2
POU5F1
RASAL2
HGS
ARL16
GNAI2
SPRY4
MAD2L2
DRAXIN
SYBU
SELPLG
ACVR1
TTYH1
BUB1
SCARB1
HBG2
HBG1
SALL3
EPHB3
STN1
MFHAS1
MDN1
PLEKHG1
GPC4
IER5L
TPST2
SOX5
TRIB2
MCCC1
TBC1D14
FBXO40
PSMG3
ITGB3
ITGA2
IFT80
ZNF343
SH3BP4
GET3
CDC42EP3
CCBE1
ZSCAN10
OSBPL1A
FZD8
MED12
IL2RG
GOLGA6B
SMYD2
OR2T1
ENSA
NDUFS5
CNN3
CYP2S1
SCAF4
IGFL3
HOXD11
NDST1
HHIP
PALLD
KCNN2
VWCE
BEND3
GOLGA6C
CUEDC1
MANBAL
DGLUCY
CREB5
ZNF18
KIFBP
FRG2C
CYTH2
NEDD9
CDH18
P2RY12
FGF2
PTBP2
CTNND2
SHF
SLC34A1
PFN3
TES
CERCAM
TOX3
RASA1
MYCL
ONECUT2
ZYG11A
C1QTNF7
GDF3
NOTCH2
SMC6
GEN1
GCNT2
ETS1
H3C15
H3C14
SLC20A2
HMOX1
FAM180A
ADAMTS18
FMN1
EAPP
LRRTM2
CTNNA1
URGCP
LIMK2
CELF4
ARIH1
ZNF335
NBPF15
HOXD13
HOXD12
PNRC1
FBXL14
CITED2
PDCL
KDM2B
CEP41
TNRC18
LOC100129484
EXT1
CRYGB
TUBB
MDC1
SLC35A5
ATG3
PRRC2B
LMNA
PRR15
PDHA2
EPB41L1
CCDC200
BICD1
ATXN7
TGIF1
DICER1
TMPRSS7
GPR31
TCF4
PEAK1
HMG20A
FYN
PHAX
ALDH7A1
WNT5B
MKRN1
ZBTB45
ERMN
B3GALT5
BCL9
CPA2
PRKG1
GCSAM
RTN4
OLFML3
SYNDIG1
CHRNA1
PLEKHB1
ANXA2
SPHK1
URGCP-MRPS24
DAGLB
HES1
TRPM1
PDE4D
MYSM1
CAPRIN1
PRDM14
NUAK1
SFRP1
KIAA0895
THOC3
SRSF7
SNAPC3
IL34
REV3L
ATG10
SLC39A8
TAF13
CTBP2
UNC13B
PCBP1
PSEN2
LYPD6B
LIFR
CER1
HSPG2
LEFTY2
PHTF1
FRY
FOXA2
CTIF
NEUROG1
KIF6
BTBD10
C1orf198
DTNA
ADAR
ANK2
LARP1B
MBNL2
WDFY1
CCDC33
CCAR2
C8orf58
DGAT2L6
SOCS5
PGK1
ERG
SYN3
GPM6B
RGPD2
RGPD1
ADGRL2
ANAPC4
DHDDS
WBP1L
NXPH1
SLA2
FOXD1
ABO
SGMS2
ADA2
NEK6
SRCIN1
CAPN3
L1TD1
NUAK2
ZNF304
CSK
NMNAT2
LGALS8
AGK
GABRB3
ANKRD35
NECTIN1
KNDC1
LRAT
OR6A2
MAP6
ECT2
LRTM1
ZNF536
DDX43
SMIM32
BCAT1
WEE1
KDM3A
SLN
SEPTIN5
DACT1
PPP2R3A
ZNF532
NOTCH2NLB
NOTCH2NLA
SNX19
FAM219A
DNAI1
ABCB5
GTF2I
PSMG2
ALDH1A2
CARHSP1
CACNA1S
ASCL5
OCSTAMP
NCOA3
FOXP4
SDK1
AASS
DDX46
LIN28A
MACROH2A1
SLC33A1
TRIML2
VPS37B
PLA2R1
TRIT1
RIC8B
FXYD7
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
SPIRE1
PCYT1B
RARB
CHFR
HES5
ZNF296
PANK4
GEMIN7
ADGRD1
TJP2
DPH6
CXADR
NPSR1
STOX2
SEMA6D
NRBP2
DST
EBF2
AEBP2
VOPP1
SMIM14
ATF4
CHD6
GCNT1
FAM107A
USP7
GABBR1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
SPIN1
AHNAK
INO80D
DACT3
FAM181A
WDFY2
SLC10A2
SOX13
ATXN3
NWD1
TMEM132B
ZNF195
SRP68
KCNIP4
AUH
PRTG
MAGEB2
UBQLN4
RAB25
LAMTOR2
UGP2
H2AC19
H2AC18
PAFAH2
TEAD1
PRSS48
PACSIN2
COL4A2-AS2
FXYD5
ZBTB20
SLC2A8
ZNF770
PSME3IP1
FHL1
ZNF565
ZNF674
SLC66A2
MRS2
HSBP1L1
ADAMTS9
UHRF1BP1L
KRT6B
RAX
RNF43
BZW2
ANKMY2
TRNP1
NEBL
SLC46A1
LIPK
FEZF2
CRISPLD1
LRRTM4
FAM110D
MARK2
LHFPL4
LRIG1
TMEM170A
TCF7L2
ZNF781
PHC2
MOG