ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HMGB1 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◣ HMGB1: Average

◢ SRX2765964: HUVEC

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
MAMDC2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
DUX4
USP31
FRG2C
EPHX1
NUDT4B
NUDT4
GTF2IRD2
GTF2IRD2B
MUC1
KATNBL1
DEDD
SYT7
ZNF718
USP17L22
USP17L21
USP17L20
USP17L12
STK17A
MXI1
NAA25
ZNF341
MCU
ANKRD40
NSFL1C
NSF
BCAR3
ZNF595
COQ2
PRICKLE1
INO80D
CCDC88A
JRK
ATL1
TSPAN10
NPLOC4
JPT1
DOCK7
EPHB1
SLC39A10
EIF4H
USP17L19
USP17L18
USP17L17
USP17L11
TOP2B
NOTCH2NLC
C7orf25
PEX7
ST7
JMJD1C
PDCD2
CEP68
CALM2
TMEM71
PHF20L1
PREP
RNF220
RHOB
TWF1
TMEM245
KDM3B
BCAP29
PAM16
IKZF2
NCOA5
MOV10
ACVR2A
VPS36
KANSL1L
CKAP2
CNIH1
C7orf26
TRAK2
STRADB
FOXN3
ZSWIM6
LRP12
EID2B
EID2
ATL2
ARHGAP28
ZNF148
R3HDM2
INHBC
CHAMP1
ZNF860
USP17L15
USP17L13
OSBPL10
RNF146
HDHD5
TASOR2
MAPK11
AHCYL2
SBNO2
MSRA
SLC9A1
ARL4D
CCSER2
ZNF839
PELI1
NREP
MET
LDLRAD3
LDB1
H2AZ2
CCN2
SPTLC2
FBXL13
ARMC10
ARHGAP29
TCF4
FAF1
CDKN2C
SNX25
CFAP97
RAB11FIP2
C1QBP
NUDT3
BZW1
PLCB1
TMX4
RPS19
MYO1B
LMO4
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
PRAMEF2
MAP4K5
HNRNPCL1
CERS6
ST3GAL3
MARK2
DUSP5
SMIM13
ARHGEF37
PTBP1
TES
ZNF280D
ZHX3
SCAP
GIGYF2
UPF1
EIF2AK4
SPDYE14
SPDYE10P
CASTOR2
NOTCH2
QSOX2
CRPPA
TRPC1
SCOC
SIK3
NFE2L2
HOXB8
HOXB7
HOXB6
GALNT10
MFSD14B
MSRB2
THSD7A
SNRPD1
MRFAP1L1
CAP2
BLOC1S4
ATXN2
MAML1
DNAJC25-GNG10
DNAJC25
TOMM6
RGL1
PRICKLE4
GCLM
FRS3
VPS26A
SIRT1
RAET1G
OPN3
CHML
RAD54L2
TM9SF3
LOC102724770
HHIP
DGCR6
YWHAQ
UBE2E2
SLTM
LIMS1
LIN9
RAC1
AP3B2
SGMS2
DTWD2
TGFBR2
PTX3
MARVELD1
FAM83G
AFAP1
ITGB1
CHRNA5
BMPR1B
GRAMD1C
UBE2S
PTBP2
AKAP12
DENND1B
AHCYL1
PIK3CA
GNAI2
RNF103-CHMP3
RMND5A
PPP3CB
DPP9
ANKRD36B
PIGX
LRRC37A3
HLCS
GPSM1
DNLZ
CEP19
CARD9
B3GALT1
ADAR
SOCS5
FMNL2
GET4
EPN1
ECE1
UBAC1
KPNA1
LGR4
IBA57
ELL2
SBSN
RALGAPB
HOXA4
HOXA3
GAPDHS
NOTCH2NLB
NOTCH2NLA
DNAJC21
IRAK3
GRIK4
SGK3
RNF135
RAP1GDS1
EXT1
WDR26
NUCKS1
KAT6A
VAMP3
NADK2
ZFAND6
STX11
SLC20A1
ORAI1
MAP2
LYRM7
HINT1
FBXL7
CLTB
UTP4
STX7
RAD23B
DERPC
CHTF8
CCDC200
SH3D19
PHF20
KMT5B
SYPL1
SRSF9
HDGF
DYNLL1
SNX2
PARVA
FRG2
ATE1
HSP90AB1
ZBTB34
USP36
TRPS1
SENP6
RMI2
PRPF40B
HECTD2
EPM2A
CXCL2
AFAP1L1
NBPF1
METTL9
FBXO30
ESYT2
DYNC2I1
ZFPM2
ID3
COA8
BAG5
TMED7-TICAM2
TMED7
LIG3
FRYL
SPTAN1
PRKCA
ING1
DENND4B
CARS2
TPK1
RASA4
PSD3
MAP2K2
HMGB1
ACVR2B
HEBP2
PANK3
GCSH
CMTM7
ZNF609
MYO5A
MBD3
ITGBL1
ASXL1
HMGN1
FOXN2
BTG1
TAOK2
PUF60
VRK1
VPS4A
VCL
SSU72
PROS1
NUTM2E
ELK3
ECI1
ARL13B
USP17L10
UBN2
TM7SF3
PRSS27
PAIP1
OAT
MED21
HHEX
DISP3
TBC1D8
RIC1
ZBTB20
USP3
CACNA2D1
ZFAND4
LHPP
KRT10
ITGA6
SMARCD2
SLC12A2
PKD1
MBTPS1
ADNP2
TFAP4
NEK7
AFF1
XXYLT1
BASP1
B3GNT2
TMEM131
SRGAP1
RXYLT1
CST4
ARNTL
PACS2
LAMTOR3
COBLL1
BRF1
YBX3
TSKU
RHOBTB1
ELAC1
RAP2B
PINK1
NPHP3
MAP1LC3B
FBXO31
COQ10A
ANKRD52
RC3H1
NFIB
ZYG11B
POLG
PHAX
CELF6
ALDH7A1
ZNF76
ZMYM4
TSPAN3
PRSS23
PAXBP1
ARL5A
KLF9
ETS1
ENDOD1
BSN
UGCG
RHBDF1
MPG
DENND5A
UBE2H
PRKCQ
FHL2
KIF3B
ARHGAP26
ABR
NUFIP2
INPP5F
CPSF6
GID8
DIDO1
DDHD2
AGFG1
ZNF706
SLC30A1
SERF1B
SERF1A
PTPRA
NR4A2
ACER3
RBM26
PAQR3
MYCBP2
POGLUT3
SNTB2
SEC24B
RUFY2
PURA
EIF4G1
C9orf72
ZC3H7A
P3H2
MTMR12
ARFGEF2
SMAD3
SETD7
PCBD2
PABPC4
ERAP1
RAPH1
COLGALT1
UBE2D3
TRAPPC3
RPS6KA5
RAP1B
PDIK1L
NOXA1
MAP7D1
DGLUCY
CISD2
ZSWIM4
WDR87
TNFAIP3
SIPA1L3
RAB4A
PRDM11
PLEKHA8
MTSS1
MCC
FNTA
FKBP14
ZFAND5
TOR1B
TANC2
MST1L
MEMO1
UBE2J2
SCNN1D
ROCK2
LCOR
IRF2BP2
G3BP1
SNX5
MGME1
SNRK
HIVEP2
DTD1
ARHGAP42
TBC1D30
OXR1
LCORL
EIF3L
CAPN1
ANKRD54
TRNP1
SCRT2
RBFOX2
MUC3A
B3GNT5
ZNF362
SLC25A37
ITGAV
DYNC2I2
DONSON
TERF2
SMURF1
RARG
NAPEPLD
CHST11
CDCA4
CARNMT1
ADD1
TATDN2
MCMBP
FAM222A
CTSO
CSRNP2
PDCD7
FAM126A
RSAD1
KIF27
HERC2
CHAD
ARID1A
PHRF1
HBEGF
EDF1
DICER1
CREM
ARRB1
AHCTF1
ACTR10
ZC3H14
SLC25A24
SCRT1
PTPN21
PKIA
PEAK1
PAOX
HMG20A
ECHS1
DGAT1
CPOX
ANXA4
AAK1
TMEM64
RALB
COPRS
AGO3
ZFAND3
TNPO1
SMAD4
OR4N4C
OR4M2
FGD5
EIF2AK3
C7orf50
ARHGEF7
SVBP
SOX5
JUP
ERMAP
AKAP7
VPS13D
TSEN54
TBC1D9
PANK1
MED13L
LLGL2
HSPG2
HENMT1
CDR2L
CASKIN2
ABL1
LRRK1
IMMP2L
GIT2
FBXL22
ARHGAP10
ANKRD13A
TPM1
TNFRSF11A
RUNX1T1
MTHFD2L
IDH2
FAM174C
DEK
CIRBP
TMEM255B
ADORA2B
STK39
RNF139
PDE2A
CNOT6L
AP3D1
TRIM44
STXBP1
SP1
SIPA1L2
RDX
NR3C1
HNRNPR
GCLC
TNFRSF6B
TCF12
SRSF4
LPIN1
ERGIC1
DMRTA1
ZNF697
VPS54
RESF1
IQSEC1
GPR146
ELF2
CCND2
C11orf91
ZNF124
USP49
TTC7B
PRR7
FAM193B
D2HGDH
WWP2
WDR1
PTPN4
NOB1
LEKR1
HECTD1
TNIP2
TMEM211
TECPR2
SPR
PTEN
KLLN
KDELR1
GRIN2D
GATA2
CTNNB1
CINP
CCDC117
YPEL1
TIRAP
RBM17
ODC1
MAP4K3
IGFBP4
CYP2U1
CIZ1
CCNJ
PTPN14
PHF3
HSF2
GATAD1
BPNT2
RNF103
PTP4A2
LACTB
KRTAP12-3
KRTAP12-2
ZFYVE9
SASH1
RPAP3
PI4K2A
MORN4
MFSD14C
ZSWIM8
ZNF695
THRA
RNF2
NR5A2
LRRC8C
INPP1
HS1BP3
EHD4
DNMBP
CREG1
CHCHD1
WAC
UBXN2A
TTC21A
RANBP17
NCOA6
NCOA1
KCNJ2
GORASP1
GLRX5
FOSL1
CCDC85B
ZSWIM7
WDR53
UBE2M
TTC19
TACC1
STK35
MFSD12
JAK1
GNB4
GAB2
FBXO45
DNAJB6
CHMP2A
CDC42
BOD1L1
APBA1
AP3M2
RAB40C
OGFOD3
ING2
HEXD
GPCPD1
CHST3
SMAD5
MAP3K3
LIFR
H2AZ1
GGA2
DNAJB14
DLST
CD81
ARID5A
YPEL2
UBE2E3
UBE2D2
SPPL3
SHOC2
SEMA4D
MFSD14A
MARCHF6
MAP3K14
KPNA4
GRK2
BBIP1
XKR6
UST
TLK1
INF2
HIPK1
FLNC
UBP1
TRAP1
TOMM40
TMTC1
TEX261
RAI14
PLPP4
LUC7L
KCTD18
FAM234A
DDAH1
TRIM65
NT5DC1
MRPL38
GSR
FIGN
ERO1A
ZNF93
UVSSA
TSPAN5
TMEM181
SAV1
ME2
CSNK1E
CSK
SYT14
RNF216
PRRC2B
NSMCE3
MSANTD2
MAPK8
GXYLT1
DRAM1
DAP
CAPZA2
C15orf61
VEZF1
TTLL11
SMARCA4
RAD52
PRKAR2B
PLEKHA1
NXF1
MAP3K1
KIF1B
BMP4
STRN
PFN2
NIT2
IER5
GUCY1A1
FXN
CDK20
VARS1
UNC79
SPAAR
NXN
ITSN1
HRCT1
ERBIN
CRYZL1
CMTM8
BTBD7
ATXN7L1
ABCD3
YEATS2
WHAMM
TM2D3
SUN2
RNF169
NT5C2
NCOA7
HACD2
GNPTAB
FSD2
FBXO33
CHPT1
ZNF639
TMEM43
SNX7
SNAI1
RNF19B
NAP1L4
DEGS1
CHCHD4
BLMH
SUMO2
SORBS1
SESN1
RALA
GTF2I
ATP5PD
ZNF131
WSB2
TPRN
TMEM203
TCEA2
SLC36A4
SDCCAG8
NDOR1
NAV1
HESX1
COTL1
CEP170
CCNI
APPL1
AFG3L2
USP10
TAF4
SMARCC1
SEPTIN9
RUFY1
LIMS2
ENOSF1
CLCC1
USP14
UCK2
TUBB6
TRA2A
NTAN1
WRN
TUSC1
TLN1
SACS
PURG
INTS6
ILKAP
GRK5
GCA
FDX1
FAM53B
CREB3
CDV3
ADCY6
ZBTB6
WNT2B
TRMT1
RRP36
RC3H2
NAMPT
NACC1
MEA1
MBD2
LMO2
KTN1
ETS2
CD164
VEZT
TXNL4A
SAP30
RBKS
NDUFAF6
FGD6
BABAM2
ASAP1
ZNF513
TOLLIP
SNX17
SFTPC
RALY
PLOD2
LGI3
LAMA2
FBXO10
B4GALT5
TAPT1
SSH2
SLC35B2
RAB7A
OSBPL1A
NFKBIE
ELK4
CDR2
ZMAT3
SPINDOC
SFXN1
PUS7
PHC1
NR2C2
MORC2
KBTBD2
EML1
DCBLD1
CACHD1
BNIP3L
ZCCHC3
RRAS2
LHX9
DESI2
CSF1
C20orf96
C1orf53
BAZ1B
RMC1
POLR1B
NFIA
NDFIP1
MAP4K4
ITPR2
HP1BP3
CMTM3
URGCP-MRPS24
URGCP
UBE2D4
TP53INP1
TMEM44
TMEM150A
THAP1
RNF181
MEF2A
KLHL5
GPR160
FOXJ2
DYNLL2
CYB5R3
ATP5MGL
SPCS3
PBRM1
PABPC1
ORAI2
OAF
KCTD3
GNL3
GLI3
GHR
C17orf58
WDFY3
SDK1
PRNP
PCNA
MIA3
LRIG3
HPCAL1
FOXJ3
CDS2
ZNF653
ZNF511
TUBGCP2
RPL7
RINT1
RDH10
PRKAG2
PEX10
PER2
ODF3L2
NELFCD
MADCAM1
LSM8
KCTD5
CRTAP
BOLA3
ASPSCR1
UNC5B