ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

SACS
NES
NR5A2
PIPOX
SMARCA2
PLAGL1
NAV2
PPBP
PF4
SOX2
HMGB1
SMAD7
ARHGEF38
CD82
RMND5B
FLVCR1
SPATA45
TERF1
LRRN3
DNMBP
CADPS
MUC1
TALDO1
CDX2
BUB1
SOCS3
ATP1A4
RPGRIP1
TMEM70
LY96
HDAC9
LRRN1
GOLGA6B
SPRED2
OBI1
OTX2
DPPA5
ATP8A2
SSB
NTRK2
AGO1
DNMT3B
KLHL7
GOLGA6D
TCF7L1
LRRC10B
BDH1
METTL11B
ADAM28
OR5AR1
GPRC5B
REST
RIPK1
C9orf85
ABHD17B
TARS1
RPH3A
ANKRD1
MTF2
FGF1
GOLGA6A
FAM227A
CBY1
CACHD1
PSMG3
ID3
MAMDC2
CBFA2T2
CYP2S1
ABHD11
TENT5B
APBA2
KDR
FGF2
SLTM
GLYATL1B
FBXO40
POU5F1
CLDN9
CLDN6
GOLGA6C
CACNG8
TNNI3K
LZTS1
NFE2L3
SLC7A5
SCGB3A2
NAA50
ATP6V1A
PALLD
CYP1A1
PLPP2
GIMAP5
SERINC5
SFRP2
STON1-GTF2A1L
PHF5A
ACO2
RAB17
MUC4
SOX6
GNAI1
FGD3
DAGLB
FIGNL2
SRRM4
PIM2
DUSP6
RNASE6
EDDM3B
PRSS48
PHC1
TNC
SHCBP1L
FAM222B
SAMD5
IFRD1
DHX32
TMPRSS11E
PPP1R16A
FOXH1
ZNF483
FBP1
HOXB1
NANOG
SOX21
RASA1
KIF21A
ITPRID1
DHDDS
GAST
LIN28B
TMEM47
URM1
SLC36A2
GAD2
PPP1R16B
HBG2
HBG1
ASXL3
LRRTM3
FAM174B
PARP1
PREX2
FAM180A
IGFL3
SOX5
BCOR
TNFRSF11A
NCDN
KIAA0319L
TUBB
MDC1
ZNF398
AASS
DDR1
LBP
PSMD9
HPD
SCN5A
LMCD1
GLRA1
APOBEC3F
CD99L2
CCBE1
ETS1
DMXL1
TREX1
SHISA5
EXOSC9
CSAD
ZNF740
ACVR1
SACM1L
MED25
FUZ
DEFB113
DEFB114
KDM2B
LHPP
MFHAS1
APOBEC3D
APOBEC3C
TCAF1
TUBB2A
WDR74
STX5
CER1
CXADR
TRIB2
SLC39A8
TRIM24
GRK6
DDX17
PRICKLE1
SAMHD1
PTMA
ZNF608
HSPG2
FAR2
HSCB
CHEK2
GLT6D1
FADS3
LDB2
GAS1
HESX1
GSG1
GLI2
TOMM40
AGK
GMCL2
TEKT3
FGFR2
PGAP3
ERBB2
GTF2I
BTG2
MDN1
SDK1
PXMP4
RFX4
NRXN1
LIPK
CAPZB
PLA2R1
ATF4
MIEF1
TSKS
AP2A1
ZFHX3
SNRPN
SEPTIN5
NADK
SORBS2
KNDC1
ZNF536
CACNA2D1
KIAA0895
FAM24B
TGIF2-RAB5IF
TGIF2
ZNF296
GEMIN7
CNN3
SLC2A14
ZCCHC3
C20orf96
SGMS2
PRKG1
SCAF4
CREB5
LFNG
GABRQ
PCNX2
MTHFD1L
ZNF304
PSORS1C2
MFSD4B
COL17A1
KCNJ1
GNAI2
ZSCAN2
PRR15
ICMT
HES3
GDF11
DOK7
NDUFB5
MRPL47
MSR1
CITED2
LRRTM4
CLEC5A
COMMD7
TDGF1
LRRC2
HMOX1
ZEB2
RASGRF2
CARHSP1
ITGB8
ID1
SOX13
SMIM3
SULT6B1
NXPH2
PRDM14
USP44
ADA2
HGS
ARL16
ZSCAN10
PHAX
ALDH7A1
MYSM1
DNTT
CD2BP2
MOBP
MTRNR2L8
RASIP1
IZUMO1
FUT1
FGF21
SMYD2
EBF2
RTN4
CDC14B
TBC1D14
FOXD1
S100A16
CTDSP2
SLC46A1
FZR1
FAT1
ZNF428
SRRM5
GSX2
RPL17-C18orf32
RPL17
TSPAN5
NRARP
RCN1
ZFC3H1
THAP2
MAST1
RTBDN
TNFSF8
ZNF668
CCAR2
C8orf58
SEPTIN9
SALL3
NDUFS5
CELF3
RIIAD1
ZSWIM3
ACOT8
TESK2
MMACHC
PGBD5
UFD1
CDC45
DMRT1
CRH
WFDC8
SMC6
GEN1
ZNF18
CCT2
FAM126A
SRCIN1
NECTIN1
ADGRD1
NUAK1
CARM1
ALDH1A2
CD200
TRAPPC8
C1orf100
PHETA2
NAGA
KCNMB4
TLL2
TLX3
GPATCH8
IER5L
KIFBP
OR2AT4
WDR49
LRIG1
PDPN
FGD4
BCL2L1
TCF20
TBC1D1
CDYL
SYNDIG1
BIN2
GET3
CLEC2L
CRYAA2
CRYAA
PBX2
GPSM3
SGK1
MYCL
PYDC5
IFI16
TFAP2B
RAX
ROR1
SMN2
SMN1
PYGM
FXYD7
FXYD5
GADD45G
GDF3
PCBP1
TPH2
CHRNA1
DST
SMIM32
ATP6V1G1
ONECUT2
GALNT3
ARAP3
AEBP2
NRG1
NFE2L1
MCF2L2
LRRC47
PIF1
LCA5
SGPP2
ARSD
FBXL19
FRAT2
CNMD
DEFB110
CHFR
EXOC7
DYSF
BBS7
MAP6
SUCO
ANK2
TRIM13
CTNND2
IFITM1
IFITM2
IFITM5
SIN3A
PLEKHA1
CNOT11
RBFOX2
PDHA2
PHLPP2
HHIP
LMNA
MEX3A
RAB30
CSF2RB
FYN
ZNF781
HIP1R
PPP1R3B
BUB1B
FAM153B
TRIM5
TRIM22
BZW2
ANKMY2
YLPM1
DUX4
DPH6
URGCP
TCF4
URGCP-MRPS24
BRINP2
ASTN1
ETV1
LLGL1
TTYH1
P2RY12
CSTL1
CST11
ABCB5
USP7
LARP1B
TMEM63A
LEFTY1
DUSP29
MMP10
TRIM39-RPP21
TRIM39
SYAP1
CTPS2
HOMEZ
KCNMB1
C7orf57
SUN3
CHN2
LRAT
ZNF195
CPVL
TMEM41B
BTBD10
TRNP1
FRMD4B
DCAF4L1
SLC30A9
EPHB3
KIAA1522
SHANK2
RAD54B
FSBP
CARS1
PTBP2
KLF3
FRY
SDCCAG8
CEP170
CSRP2
ERMN
SLC6A8
PNCK
KCNA4
FBXW11
LEPROT
LEPR
UNK
H3-3B
ITGB5
GCLC
SDCBP
ACSM6
DRD1
QSER1
PLN
FSTL4
NOXRED1
ETV4
FZD7
B3GALT5
TRIML2
DLST
RNF213
SYNDIG1L
PSIP1
SLC34A1
PFN3
FUS
ETFB
NUAK2
QPRT
ZNF763
SPG21
PES1
TCN2
LEFTY2
KLRC1
KBTBD8
KCNN2
TKT
EYA1
AKIRIN1
NMNAT3
PCDH1
ACCS
KMT2B
KMT5C
CELSR3
COX6B2
NFE2
STN1
CYTH2
HECW1
ARHGAP42
LINGO1
ATG10
LEKR1
LIX1
CCDC88C
TARBP2
NPFF
MAP3K12
TBC1D16
FOXI3
BCL9
PRPS1
PILRA
WDR33
PAN2
IL23A
APELA
LAPTM4B
PIGH
PMEPA1
SCARB1
ACSL6
AJAP1
SASH1
DNMT3A
CTSF
MSANTD1
PXDC1
CCDC124
FAM107A
SLC16A13
SLC16A11
MEIS3
SLC33A1
PPAT
PAICS
DDX46
SMIM14
CSGALNACT1
COL12A1
PCBP4
GPR62
ESRP1
RTP4
ESRRA
CATSPERZ
KCNIP4
PAK3
ZNF775
GJA1
GABRB3
RAB11FIP1
GPR146
ETNK2
FAM227B
AHNAK
ARHGAP22
CRLF2
ZNF251
CDX1
RHOBTB2
TEAD1
FZD8
CD4
RAB3GAP2
ST18
TRPM1
KNTC1
CCDC85A
SLC2A12
GSN
VCAN
NEUROG3
CAVIN3
SHKBP1
SOCS5
PACSIN2
BBC3
SPATA22
NRROS
RASAL2
SLC2A10
GSAP
SH3BP4
TJP2
FABP6
SFXN5
WNT6
ZNF317
OR7G3
GCSAM
PHC2
SLC16A6
ARSG
BORCS6
GHRH
ZNF77
C1orf167
GPR31
PLSCR4
ARF4
FIBCD1
HMCN2
PDCL
PCOLCE
MOSPD3
LHX2
RBM39
AQP2
ZNF506
ZNF665
AQP5
ARHGEF19
CPS1
RAB15
ZDHHC14
RNF186
PLA2G3
ZNF474
OBSL1
INHA
AMN1
PHTF1
DDX43
PLCH1
EGR3
GPR150
LMX1A
ADAMTS10
PANX1
OR6A2
WDR36
ZNF518B
ARMC3
SF3B5
PAXIP1
OLFML3
RARB
AASDH
DPPA4
PAIP2
ZBTB8OS
RBBP4
C1orf127
SMAD3
PLEKHB1
REV3L
FAM110D
GALNT18
ZNF664-RFLNA
ZNF664
CCDC92
NFAT5
POLL
DPCD
KDM2A
TFE3
GUCA1A
CNKSR3
SUFU
ACTR1A
KDELR1
GRIN2D
RBPMS
SRSF7
ADAMTS1
BEND7
TMCC1
ADAMTS9
SENP2
ZNF101
ATP13A1
ACSL1
GRAP2
CCDC90B
PDHB
ITPRIP
CDH10
RARG
ITGB7
CCDC33
PARP16
SDE2
FZD2
TMPRSS15
RIF1
CHD9
EPB41L3
INO80C
CLEC19A
PAK4
DGLUCY
YPEL3
TBX6
FAM155A
BFSP1
BEND3
SORT1
TYRO3
ART3
MUC3A
WEE1
NOTCH1
EMSY
CDKN1A
RPL27
IFI35
GOLGB1
TCP11
EXOSC2
ST6GAL1
TEX50
RAPGEF5
PLEKHG5
NDST1
RNF19A
EBF3
UQCRHL
LRGUK
SLC25A11
RNF167
PFN1
GP1BA
SLC25A48
CXCL14
NRCAM
GCNT2
CPA2
ARID3B
FOXA2
PLEKHG3
CDH18
SPRYD4
MIP
DACT2
ZNF484
PRR14L
DEPDC5
ZNF202
C18orf25
SNX19
PTGS1
RPL21
DVL2
PHF23
GABARAP
NACC2
ELP5
CTDNEP1
TMEM31
VENTX
UTF1
PTPN2
SLC38A3
S100A7
PSME3IP1
RSPRY1
SPRY4
CSNK1E
STEAP3
ARMH4
ARID2
MAD2L2
DRAXIN
PPP2R5A
CDON
SNURF
CACNA1S
ASCL5
TSGA10IP
HOPX
L1TD1
TGIF1
PRICKLE2
FOXD3
CCDC54
MRPL20
KLKB1
ADAR
CRYBG2
LIMK1
ARIH1
SMPD1
ZNF532
ETV6
ZAP70
DPYSL5
TFAP2A
COX8A
DLC1
FBN2
MOG
TRDMT1
LRRC70
AUH
PCDHB9
PCDHB8
PCDHB7
PCDHB16
LMOD1
ZBTB45
MAGEB2
TRIM28
CDK17
CELA1
PPEF2
SGCA
UQCRQ
LEAP2
GDF9
LOC107986453
FEZF2
TMED7-TICAM2
TMED7
HEY2
C6orf132
MCM10
TRAPPC3
MAP7D1
PYGO2
PBXIP1
LOC101928120
KDM3A
TMC5
BCL2L14
WASF1
CDC40
SEMG1
CAPRIN1
OAZ2
SCOC
TUBB1
SVOPL
RNF24
ATP5F1E
CDK2AP1
KIF26A
SYT12
SPAG11B
SPAG11A
DEFB104B
DEFB104A
FMNL3
LPCAT1
JAK2
TUT1
MTA2
FRS2
INTS9
HMBOX1
GFPT2
PDIA4
GSPT2
TTF2
RNF144B
RNASET2
SAXO1
RRAGA
KRT6A
CCDC30
GNA12
LRRC8A
KYAT1
ZNF35
RGS3
DTX2
ARF3
WNT10B
ZNF436
RAG2
IFTAP
ZNF3
COPS6
TES
GET4
RCAN3
MSANTD4
POU3F4
ESR1
IDNK
KCNAB2
CFAP298-TCP10L
CFAP298
PDCD6IP
MTM1
NPR1
ILF2
SH3GL1
CHAF1A
INO80D
SLC9C1
PCYOX1
TIA1
ZNF438
MICAL3
SALL4
ALPL
NODAL
N4BP2L2
UNC13B
ACOXL
NRIP2
DUSP12
TIAL1
LRMDA
MAP3K9
ZXDC
TRPM3
TOP2A
MEX3D
UBD
CST1
XYLT1
TTC39B
SPARCL1
ABCC2
ARHGEF4
EIF4E3
ZIC4
SLC25A36
RNF220
PWWP2A
ZIC1
PDZK1IP1
DUSP15
ZYG11A
CBX8
CANX
COBL
NTN1
ATP6V0D1
AGRP
MARCKS
SPHK2
FAM200B
CCDC167
RPL18
FAM83E
ZNF180
NAALADL1