ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RBM39 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◣ RBM39: Average

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ RBM39: STRING

EAPP
WDR74
STX5
PMF1-BGLAP
PMF1
H4C2
H3C2
H2AC4
H4C9
H2BC12
H2AC12
KIF5C
H4C12
H4C11
H2BC14
H2AC14
SNRPB2
H2BC11
H2AC11
ARL4D
FRG2C
DUX4
FRG2
H2BC15
H2AC15
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
B4GALNT3
SPATC1L
H2BC21
H2AC21
H2AC20
H3C12
H2BC17
H2AC17
CCDC200
MTRNR2L2
MSH3
DHFR
EXOC2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTRNR2L8
UNC45B
NLE1
PRDX1
TAF12
TMEM242
H1-2
RPS12
NPAS4
H2BC5
H1-4
POLR3E
EIF1
PEX3
ADAT2
EEF1A1
STX16
UNK
H3-3B
CNOT3
SRSF7
SNX16
MRPL44
MED23
IQSEC3
MAMDC2
FUS
MTRNR2L1
KANSL3
FER1L5
TOP3B
NSFL1C
MAT2A
POLDIP3
PSMD3
SRSF2
MFSD11
CTNNB1
RPS20
DMAP1
NOMO3
ABCC6
MTRNR2L9
H4C5
H3C4
H2BC7
H2AC7
NXF1
CCNI
CALM2
SRSF6
TM9SF1
IPO4
UBC
NGB
TMEM167B
SLC9A1
RPL5
CPPED1
FAM53C
CDC25C
GTF2H2
NOMO2
PRMT5
SRSF3
PALB2
DCTN5
GTF2H2C
GTF2H2C_2
HSPA1B
MTIF2
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3
ATF4
ZBTB4
SLC35G6
RBSN
POLR2A
ADARB1
P4HA1
AAR2
NOMO1
RPSA
NME1
TRIP4
PCLAF
H3C6
H2BC8
H2AC8
MBLAC1
DDX1
MTF2
H3C10
H2BC13
H2AC13
CBWD5
CBWD3
BRD2
RPS15A
PSMF1
PLEKHM3
DCAF10
JPT1
RPLP0
GCN1
GTF2A1
CLTC
POLR2J3
MARCHF7
SLC39A3
METTL23
H4C4
METTL25
CCDC59
KDM8
CCDC88A
RPS3
HSPA5
STX18
NUF2
PBLD
NOTCH2
HNRNPH3
OR2T1
EIF2D
ZSCAN12
INTS12
GSTCD
ACTB
HNRNPA2B1
CBX3
MRPL39
ZC3H6
E2F6
NABP1
METTL9
KMT2E
FRA10AC1
TBC1D3J
USP30
CBWD6
PDE6D
COPS7B
HERPUD1
YARS1
S100PBP
BMS1
H4C3
H1-6
HMBS
H2AX
DPAGT1
SLC24A1
TATDN3
NSL1
TBL3
RPS2
RPL3L
RNF151
NDUFB10
LOC102724770
DGCR6
RBM39
NACC2
ZNF76
NPIPA3
NPIPA2
NDUFS7
IER5
EGR1
RAF1
SCGB1C2
SCGB1C1
RPS23
ODF3
MTHFD2
ATP6AP1L
SCAND1
H3C13
H2BC18
MRPS23
DHRS2
NCOA7
ENOSF1
ZCCHC4
HSP90AB1
DPY19L4
SNRPB
COL23A1
RPLP1
WTAP
SOD2
ARL6IP1
TUBA1B
CYCS
H2BC4
H2AC6
TACO1
STAT3
TMEM41A
RHEBL1
KMT2D
ACYP2
TGM1
RABGGTA
INO80C
PTPN6
C12orf57
MTERF4
FAM98B
TLCD1
RPL23A
RAB34
PROCA1
NEK8
PLA2G10
HNRNPAB
PCK2
NRL
PAXBP1
ZNF391
TBC1D5
TBC1D19
SCFD1
PET117
KAT14
CCNC
C14orf93
SIRT4
ZKSCAN8
TNFRSF21
NUP214
UQCC3
LBHD1
CSKMT
C11orf98
TAF1D
RPL37
RPL23
GSTA4
CCNL1
CARD6
C11orf54
FAM133B
MRPS15
TUBA1C
ART1
UBE2D3
RBM28
MCL1
ZSCAN30
STX10
IER2
RIF1
FOS
ID1
GTF2B
PRAME
NASP
CCDC116
ATR
TUBB4B
STPG3
MAN2C1
FAM166A
ARL15
TTC4
GDF15
RPL10A
PDE11A
MRPS31
YDJC
EIF2B3
GBA
ALKBH3
SLC25A51
METTL8
GTF2IRD2
DCAF17
NBPF1
CRKL
TEFM
RRP15
RPL19
RPL12
LRSAM1
CACNB1
MRPL3
OAZ1
CCDC125
GTF2IRD2B
C6orf62
ZNF609
TMEM230
PCNA
TRA2B
THOC1
TEDDM1
GTF3C3
GLUL
C2orf66
SSBP1
SF3A3
PPP2CB
PPP1R10
MRPS18B
LRRC37A3
ATAT1
LUC7L2
DRD4
STX6
SLC35C2
VAMP4
SRSF1
ZWILCH
SNAPC5
RPL4
PTCD1
CPSF4
KIF16B
TDG
C12orf73
ATF7IP2
AARS2
SLC30A6
NDUFC2-KCTD14
NDUFC2
EIF4G2
TMEM267
PABPC1
NUBP1
SMIM12
CACNB2
TRIM25
SREK1IP1
DSTYK
CWC27
TMC4
LY6L
LENG1
KPNB1
HSPE1-MOB4
HSPE1
HSPD1
CEBPE
MRPS33
EIF4A2
AJUBA
MTMR2
RPL32
H2BS1
GDAP1
SACM1L
POLG2
PARK7
NBN
H4C1
H3C1
H1-1
DDX5
CEP95
ZKSCAN4
SECISBP2L
PAFAH2
NKAPL
MAPK11
IL17D
DCLRE1B
AP4B1
SLC39A10
RWDD1
TTPAL
NFE2L2
HNRNPH1
SUPT5H
SEC14L1
RPS16
RPL31
PPIA
ERMARD
OXA1L
MTERF1
EIF4A3
C2CD5
DTD2
TMEM262
SURF6
MRPL16
HINT3
RPL15
NKIRAS1
MRPL40
HIRA
ANKRD36C
TIGD1
PRADC1
EIF4E2
CCT7
XKR7
PUM1
TTC26
RPS8
MKRN3
EFHB
DGUOK
TSC1
POLR3B
PCBP2
HEATR5A
GFI1B
MUC3A
AHSG
ZNF207
UBE2S
TSSK4
TSGA10
RFXANK
PHF19
MDP1
CHMP4A
C17orf75
BORCS8-MEF2B
BORCS8
USPL1
RNF6
PSMD14
PHRF1
HMGB1
CDK5RAP1
VPS52
TOR1AIP2
TOR1AIP1
RPS18
MANBAL
B3GALT4
SMARCD2
RBM45
ITGB2
ZC3H10
RPL41
MYL12A
DIDO1
ATF3
TTI1
SFPQ
RPRD1B
LZTR1
RPL37A
TOB1
SYT7
MRPL21
IGHMBP2
FAM118A
TRPC4AP
PTPRH
DRG2
STMN3
SRCAP
RTEL1
LOC730183
GINS3
CCAR2
C8orf58
RTN4
FAM227B
DTWD1
FAN1
C1orf198
RGPD8
RGPD6
RGPD5
RAP1GAP
HMGA1
ZC3H15
SPAG11B
ARHGEF12
NPM1
NDUFAF8
NANP
HTR5A
VARS2
TOMM6
PRICKLE4
ITGB3BP
GTF2H4
FRS3
ERCC6L2
EFCAB7
ASH1L
SLC12A5
DUSP1
DDX18
SLC25A21
ZCCHC3
WDR36
SAR1B
C20orf96
POLG
YTHDF2
EIF4B
CRB1
C10orf88
ZMPSTE24
ZKSCAN2
TMCO2
ADAMTS9
PPP4R3B
ACSL3
RPL3
GOSR2
UCKL1
NEU1
ITPR1
RPS7
PIGBOS1
PIGB
BRWD1
TNPO3
ZNFX1
U2SURP
TFRC
LDHA
GTPBP10
ZFP64
SLC44A1
BNIP1
ACBD6
UBE2F
RUSF1
RMDN2
GABPB1
DR1
REXO5
H4C13
H3C11
H2AC16
H1-5
ERI2
DHRS4
CYB561D1
CITED2
ATXN7L2
STAT1
SLC16A1
NACA
BRF2
AURKAIP1
NFYC
IMP4
IARS1
CDH24
CCDC115
ARID1A
VTA1
NMBR
HNRNPC
FMC1-LUC7L2
FMC1
DDX19B
AARS1
TJP3
SLC35B1
LRRC59
HEXIM1
COMMD1
CCT4
ZNF337
TOB2
SREK1
TMEM18
TAF15
KIAA1586
HSPA6
C19orf48
ASXL1
ZCWPW1
TMEM222
TEX9
RFX7
PSMD5
PPP1R35
PPIH
MEPCE
AGBL3
TANK
CSDE1
C6orf226
UBOX5
RAD54L
NDUFS3
KBTBD4
GOLGA6L10
FOXJ3
FLYWCH2
FASTKD5
FAM180B
E2F3
ANKRD36B
ZNF627
THAP9
SEC31A
OR1F1
AFF1
ZNF384
RPS10-NUDT3
RPS10
DNAJA1
APTX
TRUB2
NECAP2
MECOM
KLHDC10
COQ4
CHGB
CCDC90B
SUGCT
PRDM7
PARP2
MPLKIP
CCNB1IP1
OLA1
EDC4
PPIL2
LTA4H
EIF2S2
E2F2
RPL11
METAP1D
ZSCAN31
VPS72
SKP1
PIP5K1A
LRIF1
GCLC
TMEM101
RAB37
IMMP2L
DDX3X
CHD2
SPOCD1
FAM174C
CIRBP
ZNF219
TMEM253
SLC1A5
ZNF184
TMBIM4
UBE2L3
SECISBP2
PNP
PIP4P1
PIP4K2B
NFATC2IP
MRPL48
MOB4
KDM3A
CKS2
ADPRHL1
SGF29
PPP6R3
ITGAV
INO80D
DARS1
ZSCAN9
ZCCHC7
TMEM238
TMEM190
RPL28
NR1H3
GMNN
DHRS4L2
CCDC97
ARL14EP
ACP2
ZNF385A
TMA16
CBWD1
THUMPD1
SMARCE1
PVRIG
MST1
SPHK2
SNX5
RPL27
RPL18
NDE1
MRPS16
MGME1
MEMO1
MARF1
LIN28A
IFI35
FAM83E
DNAJC9
FAM234B
BIRC6
ZNF518A
TTYH2
RPL38
NET1
MAPK13
ANKRD46
UGP2
SEC13
RCOR3
ACIN1
TANGO6
HECTD1
CHMP7
C2orf88
BTG1
TCF12
SURF2
SURF1
RPL7A
PSME3
PPP6R1
PLK1
MRPL58
MMADHC
MED22
BECN1
WBP1
VPS13B
RPS6
PSMC5
LSM2
INO80B
HSPA1L
HSPA1A
FTSJ3
EEF2K
CCN2
PRORP
PPP2R3C
PIGC
C1orf105
C16orf89
ATXN2L
AP1G2
ALG1
ZNF843
EIF1AD
DCAF11
CST6
BANF1
ALG10
SCML1
RPL27A
FUT10
CHEK1
RGPD2
RGPD1
CTR9
WDR11
SRSF11
SON
RPL9
PRMT3
LIAS
GART
ACVR1
SNAI1
RBBP6
PSMA6
POLR3D
MAGEF1
GJD3
C6orf47
BAG6
APOM
R3HCC1
MPZL1
LSR
BCAR3
TUBGCP3
SLX4IP
RPS27
RAB13
PPP1R3E
NPDC1
MKKS
GPN3
GID8
FTL
FAM216A
ENTPD2
DCP1A
BRMS1
BCL2L2-PABPN1
BCL2L2
ATL2
TRDMT1
REV3L
PUS10
PEX13
PDRG1
MIA2
MED15
CCNG2
XRN2
TMEM107
SLITRK3
RPL22L1
INTS6
H2BC6
FBXW2
ANKRD36
AMBRA1
WDR31
REPS1
JUNB
CRBN
BSPRY
THADA
OR13H1
CLK1
VPS16
THAP7
PCED1A
ABT1
RPN2
MROH8
HMGN4
C11orf49
RREB1
RBBP5
MAPK1
IRF9
FOSL1
COQ7
CCDC85B
AGK
THUMPD3
MYNN
ACTRT3
UBFD1
OR2B2
GOLM2
EARS2
CZIB
TPR
SLC38A2
SLC33A1
ODR4
GORASP2
FER
CAMK2N1
RGL2
PFDN6
PARPBP
NUP37
NFKBIL1
HAUS4
FZD1
DDX39B
ATP6V1G2
AHCY
SIRT5
RANBP9
PTP4A1
CSNK2A1
SF3B3
SENP1
RDH14
PFKM
COG4
POMZP3
PCIF1
NAGK
MPIG6B
LY6G6C
INTS2
DDAH2
CLIC1
TSFM
TMEM209
SSMEM1
SSBP2
POU2F1
MTX2
FAM83D
DHRS4L1
ZC3HC1
SND1
RPS3A
IQUB
WASHC1
TMEM94
SLC3A2
SDCBP
MRTO4
HSP90AA1
GABPA
EMC1
ATP5PF
AP1G1
RTP3
NCOA3
LTF
JRKL
HUS1
CFL2
CENPC
CCDC82
ARL17B
NOP14
MED4
GRK4
EXOSC6
ZNF285
STXBP3
SEC23A
RPS26
MFF
KANSL1
AQR
TINF2
SUPT3H
STAMBP
PTPN2
NEDD8-MDP1
NEDD8
MRPL35
IMMT
GMPR2
ATAD2
STAM2
RTL10
NT5DC1
ISOC1
GPANK1
GNB1L
CSNK2B
SDHAF3
PYROXD1
OTUD7B
NCDN
KIAA0319L
DDX21
AHCTF1
ZNF768
ZNF747
WWOX
VWA8
TMEM79