ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX011616 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◣ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

TRIM24
CADPS
SPRED2
SLTM
P2RY12
TDGF1
LRRC2
CITED2
PPBP
PF4
CREB5
KIF21A
FRAT2
LARP1
SF3B5
ARID2
LRRC10B
CAV3
PALM2AKAP2
TMEM70
LY96
C16orf46
LRRN3
HHIP
REST
CLEC5A
SOX2
EXOSC9
ANKRD1
NECTIN1
MRS2
SHCBP1L
SLC36A2
BDH1
SRPK1
LYPD4
DMRTC2
SNX19
PGBD5
SLC24A3
NRG1
SMARCA2
PRRG3
PHF3
OTX2
CCN2
SLBP
PSIP1
MTRNR2L1
CNOT6
RPH3A
CRLF2
COTL1
ACSL6
MID1
NANOG
SMIM14
DPPA5
PPFIA1
SLC30A10
HOXD11
HOXD13
HOXD12
VWA1
ATAD3C
PROK1
SOX6
GDF11
C11orf58
ANKRD36
SPARCL1
LRRN1
PHLPP2
ANAPC4
CCDC60
CDH18
CACNA2D1
TNFRSF11A
GMCL2
TERF1
TMPRSS11E
TALDO1
CST1
MEIS1
NDRG2
ZNF692
TRIM16L
FOXO3B
SOX5
SOX13
NRXN3
PRRC2B
MEN1
MAP4K2
KDR
SIX3
RAPGEF4
MTRNR2L8
GLIPR2
C1orf100
MIB1
RAB5C
SCGN
SYN3
GABRB3
SIN3A
GFPT2
AFTPH
SGK1
MAD2L2
DRAXIN
ITPRID1
TMSB4Y
MTRNR2L10
FHDC1
PLAGL1
RNASE6
EDDM3B
PPP1R15A
LAPTM4B
TULP2
NUCB1
LRRTM4
CPNE4
TMX1
TUBB2A
TMEM107
CACHD1
RGPD2
RGPD1
TTLL6
SPDYE7P
POM121
CLDN3
MTRNR2L2
MSH3
DHFR
ARHGEF38
SMCO1
TPTE2
MOBP
UHRF1BP1L
SLC2A14
ABCA4
RAD54B
FSBP
PRPF4
CDC26
FZD8
RASA1
TWIST1
C1QL3
CSNK1E
C4orf50
RAG2
IFTAP
ATG5
CDC42
DEFB113
DEFB114
SLC17A8
PTBP2
SGMS2
NEUROG1
DPYSL5
MEGF10
SULT6B1
MMP24
MTHFD1L
STON1-GTF2A1L
ZFYVE1
PLN
PPP1R2B
NXPH2
TFAP2D
CD82
ZNF781
ETV3
BTBD1
MED13L
PXDC1
PPP2R5A
MYO1E
ZEB2
FGR
PLA2G4A
RMDN1
PRKG1
SDS
OR11H2
CELA2A
RCN1
EYA1
PARP1
MDN1
SLC22A16
HIPK3
ERCC6L
TMPRSS15
PDHA2
MBNL3
CCNT1
SFXN1
NFKBIA
CYP27A1
KCNH1
FMO2
PITX2
GBE1
CER1
RASGEF1B
BMPR1B
DSE
TSPYL1
OBI1
ASXL3
SGMS1
PCDH10
UGP2
KCNMB4
ADD2
ZYG11A
BCAT1
ZIC4
SLC2A12
ZIC1
MCC
BNIP3
HCK
SOCS5
KLK11
KLK10
ZNF608
L1TD1
MAN1B1
CAPZA2
FBXW11
CHRNA1
USP32
NUDT13
BIN2
CTSF
TMCC1
POSTN
KLF5
TLE3
TAX1BP1
ABRAXAS1
PPP1R16A
FOXH1
WLS
COBL
FHIT
RUVBL2
GYS1
CORO2B
HEXB
IL24
KIF5C
SALL3
TRPM3
LITAF
NSUN7
ATXN7
MVB12A
BST2
PRICKLE2
BCL2L14
LRFN3
UBD
SH3KBP1
THOC7
N4BP1
NCOR2
EFTUD2
CCDC103
MTRNR2L6
SPATA3
CASQ2
SLC25A23
CRB3
SOX21
GLRA1
ITM2B
SHC1
FLAD1
CKS1B
CNN3
THRB
DLX4
TBPL2
GPD1L
SOCS3
NR2F2
RGPD6
ACCS
FTCDNL1
PHC1
DDX46
FAM24B
BRDT
RGS2
NPR1
ILF2
EML1
RNF144B
FAM178B
OR6Q1
SNRNP25
POLR3K
C9orf85
OAZ2
NKX1-2
CDH12
KLF4
H2BC21
H2AC21
H2AC20
UQCRHL
CDS1
MOG
MEF2C
ASB4
BCAT2
DMXL1
ICMT
HES3
OTX1
INAFM2
CDKL4
MED12
IL2RG
ZNF302
UBE2G2
GSN
GCNT2
TTC13
ARV1
GUCA1A
HUS1B
TOX
ATP1A4
ETS1
TCF7L2
ATAD2
H4C3
BDH2
ZNF620
HFE
VCAN
PIM2
ADGRL2
GPATCH8
ZFAND6
LRRC20
NTRK2
GAS1
HMOX1
TNNI3K
PPP2R3A
COMMD7
ANGPT1
KCNAB2
APOLD1
GALM
IBTK
NPAS1
PIK3R4
MEIS2
TP53RK
SLC13A3
SMIM31
JPT1
TMC5
LRGUK
PHF8
TANC1
ANO1
CRADD
TRANK1
MRPL20
HOPX
SORT1
FOXN3
PIGH
ZNF281
PCDHA9
PCDHA10
CRH
PLAAT4
FGFR2
FBXL19
GABRQ
FRMD3
CCDC198
SLC6A11
PLA2R1
NAA50
ATP6V1A
GPR85
CYP27C1
AMBRA1
WNT10A
SMTNL2
QTRT1
POLQ
NR5A2
CYP2S1
NPIPB4
HMGCS2
NEUROG3
ENOX1
ZBTB39
TAC3
FGF1
MBNL2
OR13A1
OR2H2
CTBS
CLDN23
ARSA
TSGA10
C2orf15
KDM7A
ECI2
TENT5B
DST
RIF1
STAT6
CWH43
CIITA
GNAI1
RMND5B
NEBL
NKIRAS2
DNAJC7
FRZB
RP1
SCGB3A2
GID4
ATPAF2
AGBL2
CRYZL2P-SEC16B
PRDM8
SERINC5
RNF43
PGAP3
ERBB2
MUC4
GPRC5B
UPF1
HABP2
MS4A4A
TMEM14A
IFNA1
SLITRK4
HSF2
AK4
CBX8
HOXD1
ANKRD36C
SLC25A28
CASP7
ADAMTS8
NGF
ULBP2
GIMAP5
FAM174B
C1orf198
BUB1
ZNF18
FEZF2
RBAK-RBAKDN
RBAK
P2RY14
RASGRF2
ARAP3
PRR5L
COMMD9
HSD17B4
NBPF19
NBPF26
NBPF14
HMCN2
LRAT
SMPD1
ANKRD6
TOX3
PRTFDC1
MFSD4B
FOXP1
CELF4
DDX17
RNASE9
TM4SF1
PANX1
LIMS1
LMCD1
ZAP70
GRHL2
MAPKAPK2
CHRNA9
PRICKLE1
TNRC6A
TOP1
ATP8A2
CFTR
RDH12
RDH11
MRPS31
GCSAM
ZNF532
SIRT4
CNMD
GLI2
SORBS2
TSPAN13
KBTBD8
LHX8
CREM
PTPRN
SLC2A10
TSKS
AP2A1
OR5AR1
ZSWIM3
ACOT8
BEND3
PSMG2
SPIRE1
SMPDL3B
KIAA0895
MFHAS1
ENKUR
MUSK
IDO2
WDR74
STX5
ZBTB8OS
RBBP4
DSC2
NDUFAB1
MAMDC2
NRARP
DUX4
MTF2
LOC102724770
DGCR6
NAV2
SACS
NES
PIPOX
LFNG
CDX2
FAM227A
CBY1
GAST
METTL11B
HMGB1
SMAD7
COL17A1
DNMBP
ZSCAN2
MUC1
HDAC9
NDUFB5
MRPL47
AGO1
ID3
PTMA
FLVCR1
DUSP6
DNMT3B
ITGB8
RPGRIP1
MUC3A
ZFHX3
KLHL7
WFDC8
IFRD1
GRK6
BCOR
KRT31
FIGNL2
MED25
FUZ
SPATA45
ID1
FGD4
SFRP2
APBA2
NOTCH1
ZNF483
ETV1
TARS1
URM1
CD99L2
TCF7L1
TRIM48
SNRPN
NRCAM
UGT1A6
BTG2
ZNF436
C1orf127
USP44
SSB
LZTS1
ADAM28
CELF3
HOXB1
FGD3
MLEC
APOBEC3F
RIIAD1
PPP1R16B
TRIM2
ABHD11
FAM222B
RIPK1
LCA5
ZNF775
RNASET2
PLPP2
CLDN9
BCL2L1
GBX2
ETV4
PUF60
SAMHD1
CDC14B
GXYLT2
CLDN6
CRYAA2
CRYAA
PDPN
GOLGA6D
TREX1
SHISA5
GADD45G
SCN5A
CYP1A1
GLYATL1B
ZBTB40
ABHD17B
GSX2
ITPRIP
DHX32
SRRM4
TPH2
SNX16
HESX1
GAD2
PBX2
GPSM3
SLC7A5
CBFA2T2
TMEM47
BFSP1
RPS24
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
SNURF
ZNF398
CDYL
CA6
PGPEP1
NADK
TEKT3
FBP1
LRRTM3
PER2
FZR1
LDB2
TESK2
ECE1
RFX4
KIAA2012
AMN1
TMEM167B
MTM1
TRAPPC8
PSMD9
HPD
CAMTA1
PHF5A
ACO2
VENTX
UTF1
SMAD3
HSCB
CHEK2
FGF12
DDR1
LIMCH1
PMEPA1
FAM120B
TIMP4
KMT2B
WDR49
CSAD
TBC1D16
CCT2
DLL1
SYT2
CHN2
ESRP1
FOXB1
TNC
SGPP2
NCDN
KIAA0319L
LINGO1
ZNF740
SASH1
ZFC3H1
THAP2
GOLGA6A
VIM
SALL4
ZCCHC3
C20orf96
DCAF4L1
RGS3
COL23A1
MMACHC
SLC30A9
SH3GL1
CHAF1A
NFE2L1
GJA1
KDM2A
TMEM41B
BTBD11
SIPA1L2
KCNJ1
SOX14
TOMM40
LHPP
NOTCH2NLC
DOK7
IQCH
AAGAB
ST18
GSAP
PYGB
MORF4L2
POU5F1
RASAL2
HGS
ARL16
GNAI2
SPRY4
SYBU
SELPLG
ACVR1
TTYH1
SCARB1
HBG2
HBG1
EPHB3
STN1
PLEKHG1
GPC4
IER5L
TPST2
TRIB2
MCCC1
TBC1D14
FBXO40
PSMG3
ITGB3
ITGA2
IFT80
ZNF343
SH3BP4
GET3
CDC42EP3
CCBE1
ZSCAN10
SERPINA1
OSBPL1A
GOLGA6B
SMYD2
OR2T1
ENSA
NDUFS5
SCAF4
IGFL3
NDST1
PALLD
KCNN2
VWCE
GOLGA6C
CUEDC1
MANBAL
DGLUCY
KIFBP
FRG2C
CYTH2
NEDD9
FGF2
CTNND2
SHF
SLC34A1
PFN3
TES
PTPRN2
RBFOX2
CERCAM
MYCL
ONECUT2
C1QTNF7
GDF3
NOTCH2
SMC6
GEN1
H3C15
H3C14
SLC20A2
FAM180A
ADAMTS18
FMN1
EAPP
LRRTM2
CTNNA1
URGCP
LIMK2
ARIH1
ZNF335
NBPF15
PNRC1
FBXL14
PDCL
KDM2B
CEP41
TNRC18
LOC100129484
EXT1
CRYGB
TUBB
MDC1
SLC35A5
ATG3
LMNA
PRR15
EPB41L1
CCDC200
BICD1
TGIF1
DICER1
TMPRSS7
GPR31
TCF4
PEAK1
HMG20A
FYN
PHAX
ALDH7A1
WNT5B
MKRN1
ZBTB45
ERMN
B3GALT5
BCL9
CPA2
RTN4
OLFML3
SYNDIG1
PLEKHB1
ANXA2
SPHK1
URGCP-MRPS24
DAGLB
HES1
TRPM1
PDE4D
MYSM1
CAPRIN1
PRDM14
NUAK1
SFRP1
THOC3
SRSF7
SNAPC3
IL34
REV3L
ATG10
SLC39A8
TAF13
CTBP2
UNC13B
PCBP1
PSEN2
LYPD6B
LIFR
HSPG2
LEFTY2
PHTF1
FRY
FOXA2
CTIF
KIF6
BTBD10
DTNA
ADAR
ANK2
LARP1B
WDFY1
CCDC33
CCAR2
C8orf58
DGAT2L6
PGK1
ERG
GPM6B
DHDDS
WBP1L
NXPH1
SLA2
FOXD1
ABO
ADA2
NEK6
SRCIN1
CAPN3
NUAK2
ZNF304
CSK
NMNAT2
LGALS8
AGK
ANKRD35
KNDC1
OR6A2
MAP6
ECT2
LRTM1
ZNF536
DDX43
SMIM32
WEE1
KDM3A
SLN
SEPTIN5
DACT1
NOTCH2NLB
NOTCH2NLA
FAM219A
DNAI1
ABCB5
GTF2I
ALDH1A2
CARHSP1
CACNA1S
ASCL5
OCSTAMP
NCOA3
FOXP4
SDK1
AASS
LIN28A
MACROH2A1
SLC33A1
TRIML2
VPS37B
TRIT1
RIC8B
FXYD7
TIAM1
UNK
H3-3B
KLF3
CSF2RB
PCYT1B
RARB
CHFR
HES5
ZNF296
PANK4
GEMIN7
ADGRD1
TJP2
DPH6
CXADR
NPSR1
STOX2
SEMA6D
NRBP2
EBF2
AEBP2
VOPP1
ATF4
CHD6
GCNT1
FAM107A
USP7