ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702105 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◣ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

REST
TMPRSS11E
METTL11B
OTX2
CDX2
PLAGL1
MAMDC2
SPRED2
MFSD4B
TCF7L1
NR5A2
CLDN9
CLDN6
SOX2
SFRP2
SERINC5
MTHFD1L
SMPD1
ATP1A4
SSB
HESX1
CD82
SACS
AGO1
NTRK2
NRARP
ARHGEF38
MUC4
LEFTY2
VENTX
UTF1
APBA2
HHIP
FOXA2
MTRNR2L8
PPP1R16A
FOXH1
MTF2
GAS1
ZNF483
TMEM63A
LEFTY1
SMARCA2
TERF1
SMAD7
BCOR
TBC1D16
CARHSP1
FAM227A
CBY1
DHDDS
NES
TNNI3K
MUC1
KLHL7
DACT1
RNF220
HOXB1
LIN28B
PSMD9
HPD
ZFHX3
DPPA5
ZSCAN2
CADPS
MOBP
BDH1
SHC1
FLAD1
CKS1B
FAM222B
CCBE1
TRIM48
DUSP6
PHC1
SCN5A
SOX6
NRG1
RAX
FOXD3
POU5F1
CACHD1
ARID2
CD99L2
DNMBP
FZD2
SHCBP1L
SLC7A5
HSCB
CHEK2
RNASE6
ADAM28
EDDM3B
ANXA2
HMGB1
GAD2
MDFIC
GNAI2
LRRN3
ATP8A2
GDF11
FAT1
KIF21A
LEMD2
ANKRD1
IFRD1
TENT5B
GSX2
GNAI1
GLI2
TRIB2
LOC102724770
DGCR6
MED25
FUZ
FGF1
RPH3A
SEMA6D
NAV2
PTPRN2
TNC
NAA50
ATP6V1A
CER1
SH3GL1
CHAF1A
SOX21
LRRC10B
HBG2
HBG1
AKIRIN1
ETV4
FOXD1
DDX46
GIMAP5
GRK6
USP44
SLC46A1
DEFB113
DEFB114
ADNP2
PCNX2
PSIP1
LRRTM3
MFHAS1
SOCS3
SNRPN
OBI1
RFX4
NEUROG3
RASGRF2
SAMD5
LHPP
ZNF536
CECR2
COL12A1
ZNF608
TALDO1
PIPOX
ZNF436
DDX17
CITED2
FLVCR1
SPATA45
MED12
IL2RG
DNMT3B
C9orf85
SHANK2
GLRA1
RMND5B
KIAA0895
REV3L
GAST
KCNIP4
HAS3
LRRN1
TARS1
SNX16
ZNF674
URM1
BTG2
RIPK1
STON1-GTF2A1L
CACNA2D1
PAK1
PPBP
PF4
ETS1
FRY
DUX4
LFNG
WDR74
STX5
COL17A1
HDAC9
NDUFB5
MRPL47
LMCD1
ID3
PTMA
ITGB8
RPGRIP1
MUC3A
WFDC8
OR5AR1
KRT31
FIGNL2
TDGF1
PIM2
ID1
FGD4
ZBTB8OS
RBBP4
NOTCH1
GSN
ETV1
LRRC2
SLTM
NRCAM
ITPRID1
UGT1A6
C1orf127
LZTS1
DMXL1
FGFR2
CELF3
FGD3
MLEC
APOBEC3F
RIIAD1
SGK1
PPP1R16B
TRIM2
ABHD11
LCA5
ZNF775
RNASET2
ICMT
HES3
PLPP2
KIF5C
BCL2L1
MTRNR2L1
GBX2
PUF60
SAMHD1
CDC14B
GXYLT2
MTRNR2L2
MSH3
DHFR
CRYAA2
CRYAA
PDPN
GOLGA6D
RCN1
TREX1
SHISA5
GADD45G
MID1
PRICKLE1
ZSWIM3
ACOT8
CYP1A1
GLYATL1B
ZBTB40
ABHD17B
FAM174B
TMCC1
VCAN
SMCO1
ITPRIP
DHX32
SRRM4
TPH2
NANOG
PBX2
GPSM3
CBFA2T2
TMEM47
BFSP1
RPS24
PARP1
PREX2
PHLPP2
NFE2L3
CRH
SNURF
GPRC5B
ZNF398
CDYL
SCGB3A2
UQCRHL
POSTN
CA6
TMEM70
PGPEP1
NADK
TEKT3
PALM2AKAP2
FBP1
TRIM24
ASXL3
SLC36A2
PER2
FZR1
TUBB2A
LDB2
TESK2
ECE1
FBXW11
KIAA2012
KDR
SORBS2
ZEB2
AMN1
TMEM167B
MTM1
TRAPPC8
CAMTA1
PHF5A
ACO2
MRPL20
LY96
SMAD3
FGF12
DDR1
LIMCH1
PMEPA1
FAM120B
TIMP4
KMT2B
WDR49
HOPX
CSAD
CCT2
DLL1
SYT2
CHN2
ESRP1
FOXB1
SGPP2
NCDN
KIAA0319L
LINGO1
ZNF740
SASH1
ZFC3H1
THAP2
GOLGA6A
VIM
SALL4
ZCCHC3
C20orf96
DCAF4L1
RGS3
COL23A1
MMACHC
FRAT2
SLC30A9
ANKRD6
NFE2L1
ARAP3
C1orf100
GJA1
KDM2A
TMEM41B
BTBD11
SIPA1L2
KCNJ1
SOX14
TOMM40
FOXP1
NOTCH2NLC
DOK7
IQCH
AAGAB
FBXL19
ST18
GSAP
GPR85
PYGB
MORF4L2
RASAL2
HGS
ARL16
SPRY4
MAD2L2
DRAXIN
SYBU
SELPLG
ACVR1
TTYH1
BUB1
SCARB1
SALL3
EPHB3
STN1
MDN1
PLEKHG1
GPC4
IER5L
TPST2
SOX5
MCCC1
TBC1D14
FBXO40
PSMG3
ITGB3
ITGA2
IFT80
ZNF343
SH3BP4
GET3
CDC42EP3
ZSCAN10
SERPINA1
OSBPL1A
FZD8
GOLGA6B
SMYD2
OR2T1
ENSA
NDUFS5
CNN3
CYP2S1
SCAF4
IGFL3
HOXD11
NDST1
PALLD
KCNN2
VWCE
BEND3
GOLGA6C
CUEDC1
MANBAL
DGLUCY
CREB5
ZNF18
KIFBP
FRG2C
CYTH2
NEDD9
CDH18
P2RY12
FGF2
PTBP2
CTNND2
SHF
SLC34A1
PFN3
TES
RBFOX2
CERCAM
TOX3
RASA1
MYCL
ONECUT2
ZYG11A
C1QTNF7
GDF3
NOTCH2
SMC6
GEN1
GCNT2
H3C15
H3C14
SLC20A2
HMOX1
FAM180A
ADAMTS18
FMN1
EAPP
LRRTM2
CTNNA1
URGCP
LIMK2
CELF4
ARIH1
ZNF335
NBPF15
HOXD13
HOXD12
PNRC1
FBXL14
PDCL
KDM2B
CEP41
TNRC18
LOC100129484
EXT1
CRYGB
TUBB
MDC1
SLC35A5
ATG3
PRRC2B
LMNA
PRR15
PDHA2
EPB41L1
CCDC200
BICD1
ATXN7
TGIF1
DICER1
TMPRSS7
GPR31
TCF4
PEAK1
HMG20A
FYN
PHAX
ALDH7A1
WNT5B
MKRN1
ZBTB45
ERMN
B3GALT5
BCL9
CPA2
PRKG1
GCSAM
RTN4
OLFML3
SYNDIG1
CHRNA1
PLEKHB1
SPHK1
URGCP-MRPS24
DAGLB
HES1
TRPM1
PDE4D
MYSM1
CAPRIN1
PRDM14
NUAK1
SFRP1
THOC3
SRSF7
SNAPC3
IL34
ATG10
SLC39A8
TAF13
CTBP2
UNC13B
PCBP1
PSEN2
LYPD6B
LIFR
HSPG2
PHTF1
CTIF
NEUROG1
KIF6
BTBD10
C1orf198
DTNA
ADAR
ANK2
LARP1B
MBNL2
CCN2
WDFY1
CCDC33
CCAR2
C8orf58
DGAT2L6
SOCS5
PGK1
ERG
SYN3
GPM6B
RGPD2
RGPD1
ADGRL2
ANAPC4
WBP1L
NXPH1
SLA2
ABO
SGMS2
ADA2
NEK6
SRCIN1
CAPN3
L1TD1
NUAK2
ZNF304
CSK
NMNAT2
LGALS8
AGK
GABRB3
ANKRD35
NECTIN1
KNDC1
LRAT
OR6A2
MAP6
ECT2
LRTM1
DDX43
SMIM32
SULT6B1
BCAT1
WEE1
KDM3A
SLN
SEPTIN5
PPP2R3A
ZNF532
NOTCH2NLB
NOTCH2NLA
SNX19
FAM219A
DNAI1
ABCB5
GTF2I
PSMG2
ALDH1A2
CACNA1S
ASCL5
OCSTAMP
NCOA3
FOXP4
SDK1
AASS
LIN28A
MACROH2A1
MBNL3
SLC33A1
TRIML2
VPS37B
PLA2R1
TRIT1
RIC8B
FXYD7
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
SPIRE1
PCYT1B
RARB
CHFR
HES5
ZNF296
PANK4
GEMIN7
ADGRD1
TJP2
DPH6
CXADR
NPSR1
STOX2
NRBP2
DST
EBF2
AEBP2
VOPP1
SMIM14
ATF4
CHD6
GCNT1
FAM107A
USP7
GABBR1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
SPIN1
AHNAK
INO80D
DACT3
FAM181A
WDFY2
SLC10A2
SOX13
ATXN3
NWD1
TMEM132B
ZNF195
SRP68
AUH
PRTG
MAGEB2
UBQLN4
RAB25
LAMTOR2
UGP2
H2AC19
H2AC18
PAFAH2
TEAD1
PRSS48
PACSIN2
COL4A2-AS2
FXYD5
ZBTB20
SLC2A8
ZNF770
PSME3IP1
FHL1
ZNF565
SLC66A2
MRS2
HSBP1L1
ADAMTS9
UHRF1BP1L
KRT6B
RNF43
BZW2
ANKMY2
TRNP1
NEBL
LIPK
FEZF2
CRISPLD1
LRRTM4
FAM110D
MARK2
LHFPL4
LRIG1
TMEM170A
TCF7L2
ZNF781
PHC2
MOG
EFNB2
KMT5C
IL7R
COMMD7
IL17RD
ERVH48-1
NXPH2
PRODH
LOC102724788
NDUFV1
TRDMT1
ATP8B1
RBM22
PIN4
PKIG
TBC1D1
FOCAD
TMC5
WNT2B
SEMA4D
MAST4
NTN5
MCF2L2
STK31
ANKRD40
DUSP1
ABCC2
TUT1
MTA2
SEPTIN9
DPYSL3
MEIS2
MSANTD4
FZD9
TIAM2
OCM
KANSL1L
PPP1R15A
DRD1
ITGB5
PLSCR4
PARP16
GABPB2
MARCKS
MMP10
DET1
MPP2
KCNMB4
SPHK2
ARID5A
GID8
DIDO1
TBC1D30
SENP2
PRR5L
TSPAN14
GABRQ
DHRS3
TCP11
PDE1B
LONRF3
FUS
SLCO5A1
EIF4A2
ARHGEF4
PPEF2
PITPNM2
BOD1L1
TMUB2
KLF7
BORCS6
G3BP1
ANGPT1
INSM1
SORT1
RAB15
EMSY
SPATA13
KLF5
FAM20A
PCDH1
ACOXL
KLF6
TP53INP1
EOMES
OR5K3
SPATA22
NFASC
EYA1
RAPGEF5
MSI1
GMCL2
FRG2
ACSL6
SIK1B
SIK1
SIN3A
ITPK1
DNTT
GALNT18
RMND1
ARMT1
CDC42EP4
AK4
RASA3
ZIC4
NRIP2
TNRC6A
PXMP4
ZXDC
TRPC4AP
OSBPL2
FAM98A
ATP6V1G1
CELSR3
SEC14L1
ETFB
LBP
ESX1
TRIM62
TAGLN3
ART1
NDUFAB1
PHETA2
NAGA
TET3
UFD1
SMPDL3B
CDC45
IL21
FMNL3
ARMC12
IRAK1BP1
TMPRSS9
AASDH
NKX2-2
FGF13
TMEM43
CHCHD4
TP53
SMN2
SMN1
WDR55
DND1
KRT8
UBR2
PRUNE2
BAIAP2
ETV6
CST1
ZBTB38
TRIM28
POLB
DPPA4
CRYBA1
SLC2A14
CHD7
ZNF814
TRMT10C
SYAP1
MT1HL1
ESRRA
CTPS2
CATSPERZ
TP53RK
FAM24B
GLDC
TMPRSS15
POU3F4
EPB41L2
SLC3A2
PCDHB9
PCDHB8
PCDHB7
PCDHB16
LEKR1
CHD1
MEX3A
SLFN12
KLHL3
EPAS1
MFSD13A
C10orf95
ROR1
PRSS23
PIK3C2A
NRROS
ADAMTS1
PCDHB5
PXDC1
ZNF189
SIX2
PTAR1
MRPL50
GHRH
ZIC3
PLEKHA5
ISOC2
LLGL1
ZBTB2
TRMT2A
RANBP1
RNF19A
FOXO6
FAM200B
ZFYVE1
ACSL1
WRAP53
OR2AT4
DDX11
ANXA3
SHC3
RNASE9
DSP
PAX3
TTYH2
ZNF428
SRRM5
CPA5
CDH10
ACCS
RAB11FIP1
SLAMF1
SPATC1L
SLC9C1
SEC14L5
CCDC130
ZDHHC14
BTBD3
UGT1A1
RIN2
MROH2A
LRP2
FAR2
OR13A1
CCDC88C
FRS2
MAGEA11
CEP85L
TCF20
ARHGAP22
FTCDNL1
PDE4B
EPHA4
YWHAQ
TSPAN13
FGD6
ABL2
TSPAN5
POLDIP3
TTC39C
TRIM56
TLL2
BAHCC1
PREP
WDHD1
SOCS4
RORC
PPP1R18
NRM
PCDH18
LUC7L3
HSF2
TRIP4