ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771668 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◣ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

SMARCA2
MTHFD1L
MUC4
ZNF483
NRG1
CD99L2
TERF1
REST
LRRN1
OTX2
MAMDC2
GAST
COL17A1
TMPRSS11E
TENT5B
HOXB1
FLVCR1
SPATA45
ZSCAN2
BTG2
SMAD7
ECE1
MOBP
SHC1
FLAD1
CKS1B
SAMHD1
SPRED2
PIM2
SFRP2
SLA2
SOX6
ZBTB8OS
RBBP4
LRRC10B
TCF7L1
APOBEC3F
CRH
OR5AR1
ID1
RPS24
RMND5B
TIMP4
ID3
GPR85
MORF4L2
FAM222B
DPPA5
SSB
ZNF343
ZYG11A
FGF1
SGK1
SNRPN
TREX1
SHISA5
ARHGEF38
CACHD1
ZSWIM3
ACOT8
METTL11B
SHCBP1L
ABO
TRAPPC8
DMXL1
CRYGB
CELF4
DNMT3B
RNASE6
EDDM3B
RIPK1
DCAF4L1
SLC30A9
ZNF398
HOXD11
HOXD13
HOXD12
GDF11
NES
PEAK1
HMG20A
BDH1
IFT80
IL34
BCOR
GPR31
ACOXL
VENTX
UTF1
OR6A2
SH3GL1
CHAF1A
PHC1
GSX2
ATP8A2
RCN1
MED12
IL2RG
FBP1
PARP1
HSCB
CHEK2
GDF3
PIPOX
WFDC8
GAD2
HESX1
TNNI3K
RASGRF2
SLTM
CAPN3
SALL4
LMCD1
TDGF1
LRRC2
MRPL20
RNASET2
SMPD1
DUSP6
TRIM56
TEKT3
KLHL3
TRIM2
C9orf85
ABHD17B
BICD1
SACS
NTRK2
GIMAP5
ANKRD1
NCDN
KIAA0319L
PLSCR4
PUF60
LIN28B
LDB2
LEFTY2
NRBP2
HOPX
CDX2
ATP1A4
DDX11
FBXW11
FAM20A
ZNF608
MKRN1
LARP1B
NBPF15
FAM174B
PPEF2
PSEN2
PRICKLE1
MFHAS1
LHFPL4
FZR1
MYSM1
CDYL
WDR55
DND1
SMAGP
LRRN3
RPH3A
AMN1
UHRF1BP1L
DACT1
VCAN
SEC14L5
PSMD9
HPD
ZNF18
SMC6
GEN1
DRD1
SYT2
C22orf39
TPH2
ANAPC4
SNURF
MAGEB2
ZNF875
EOMES
TALDO1
KRT6B
PTBP2
SLC23A2
MFSD4B
IL13RA1
GLDC
CPA2
TMEM43
CHCHD4
ETV1
SLC35A5
ATG3
GOLGA6D
FOXP4
ITPRID1
FGD4
TARS1
ABCB5
NDUFV1
RBM22
ENSA
ESRP1
PCDHB5
PCDHB4
MTRNR2L8
CLDN9
CLDN6
NANOG
SYN3
ARAP3
EXT1
ZFHX3
L1TD1
TRIM24
FZD8
CA6
IRAK1BP1
ISOC2
MAD2L2
DRAXIN
PYGB
PNRC1
HBG2
HBG1
ZBTB40
TRIML2
HAND1
AK4
TRIT1
OR4X1
FXYD7
FXYD5
DET1
TET3
FAM98A
ZNF296
GEMIN7
UGT1A6
FBXO40
UGT1A7
CNGA1
NIPAL1
SOCS5
SLC36A2
NPSR1
ZNF674
BOD1L1
CDC42EP4
GLRA1
USP44
PPP1R16A
FOXH1
GALNT18
MBNL2
SELPLG
GSN
LIN28A
GLYATL1B
NATD1
FRAT2
ITGB3
DOK7
ANXA2
CSAD
ZNF740
FSTL4
PRDM14
MFSD13A
C10orf95
JPT1
PCDHB9
PCDHB8
PCDHB7
PCDHB16
C1orf127
FZD2
PCDHGC5
PCDHGC4
PCDHGC3
TUBB2A
TRPC4AP
RAD18
TNK2
PDGFA
PITPNM2
TCP1
MRPL18
PNLDC1
CADPS
MLEC
NXPH1
LEKR1
SLAMF1
KIF21A
NEPRO
ALDH1A2
AGO1
NECTIN1
STX16
ZNF552
CEBPZ
ATP8B4
RIN1
SOX21
P2RY12
ASIP
DNMBP
KLHL7
FGFR2
ALDH2
SNX16
RASA1
RESF1
DPPA4
REV3L
SMIM32
ZNF770
ESX1
SMPDL3B
TRPM1
WDHD1
SOCS4
PTH1R
PSIP1
SMYD2
SERINC5
NDUFAB1
URGCP
URGCP-MRPS24
GOLGA6A
AGK
FEZF2
KLRB1
MTM1
TRIP4
PCLAF
BIRC6
PREX2
SOX4
ZNF318
ASH2L
ELMO3
CDC14B
SNX19
IGBP1
DDX46
TMEM98
NFE2L3
EPHA4
ATXN3
MDN1
INO80D
DNAJB1
TMEM167B
PTAR1
TMEM47
TCHP
PRODH
LOC102724788
LONRF3
FGD3
SYBU
TMEM170A
MAGEA11
ZNF565
TRMT10C
SLC66A2
HSBP1L1
MOG
IFNE
PCBP1
ZP2
ZNF436
LIPK
TNFSF8
KCNMB4
NDST1
PAK1
BRWD3
TAS2R46
PRKG1
NACAD
IL1A
MAGEA10-MAGEA5
MAGEA10
ZDHHC14
NRG2
UGP2
SENP2
TMPO
SEC22B
TBC1D16
CCDC149
KDR
NAV2
CST1
SALL3
SEPTIN5
APOBEC3G
YIPF4
NLRC4
IER5L
CCBE1
SRCIN1
GID8
DIDO1
GCNT2
RHBDD2
RNF186
GPRC5B
ANKRD40
LUC7L3
CCN3
OBI1
SEMA6D
S100A11
BTBD10
CSF2RB
PPP1R16B
CLDN14
PPP2R5A
TRABD2B
PCDHB12
PCDHB14
PCDHB13
GIGYF1
GOLGA6B
ACCS
KCNMB2
SOX14
HDAC9
SGPP2
GOLGA6C
PTPRN
FGF4
LYPD6B
SPIC
GLI2
GXYLT2
OLFML3
AEBP2
UNC13B
GABBR1
OR5K3
SLC25A16
DSP
PLEKHA5
PTDSS2
DDX39A
CCDC13
PKN1
GTF2I
SP7
KCNIP4
KNG1
TCP11L1
UQCRHL
WDR44
PPP2R3A
TMEM70
LY96
KRBA2
EPAS1
MACROH2A1
UNC119
FIGNL2
PHTF1
UBXN10
PLA2G2C
BCL2L1
CDX4
BCAT1
MEIS2
CRTAM
YAF2
PRR7
FOXA2
OLFM2
PALM2AKAP2
DGAT2L6
KRT8
CMAS
CNR2
SCAP
USP7
GNAI1
LRRC47
ITGB5
CD82
PPP1R15A
PGPEP1
MBOAT2
MAP6
BEND3
DLST
SLC38A9
RNF19B
NMNAT2
PSMG3
GUCY2F
VANGL1
PCDH19
KIAA1522
FOXD3
CYP4A22
B3GALT5
GBX2
MBNL3
HNRNPA3
ANP32A
SAMD5
NHLH1
ZNF90
ICMT
HES3
LRRTM4
HECW1
NLRP12
NADK
LRAT
DDX43
MPP2
PRUNE2
CSHL1
ZNF335
PHF8
ATG10
MRS2
METTL7A
CHFR
TMC5
LHPP
SLC34A1
PFN3
RMND1
ARMT1
NKX1-2
PLAGL1
MCCC1
CCDC169-SOHLH2
CCDC169
AIRE
MT1HL1
MRPS21
ZNF814
CAAP1
GPR150
SYNPO2
ZNF781
JARID2
PDCL
SGMS1
CCDC130
SPHK1
ZFYVE1
PHLPP2
H3C15
H3C14
H2AC19
H2AC18
PHETA2
NAGA
FGF6
NCR3
ZAP70
REXO4
ADAMTS13
ABCC2
PDE1B
OR13A1
AADACL3
ADAMTS1
NBPF12
FOCAD
KLHL4
SIN3A
IFIT3
IRF3
BCL2L12
MUC1
PALLD
EFNB2
PPBP
PF4
VIM
SASH1
AUH
GSPT2
MLN
GJA1
CDC42EP3
PRR15
NR5A2
ZEB2
LINGO1
RAX
CSGALNACT1
STON1-GTF2A1L
DHX32
ZFP3
TTLL4
KCNJ1
SAV1
AQP2
KRTAP5-9
KRTAP5-8
TMEM9B
HELLS
PTPRB
LYPD1
GYG1
TIAM1
ATF4
MIEF1
SLC20A2
SULT6B1
PLAAT4
KLF17
LHCGR
CERCAM
GCSAM
TSPAN18
FYN
SLFN12
POMZP3
DENR
BARD1
SCGB3A2
NAA30
FBXL14
UPF1
POGLUT2
BIVM
DNAJC3
FHL1
CCDC54
PPAT
LOC102723623
GOLGA6L22
GOLGA6L1
RAPGEF5
SESTD1
CCDC33
COPZ1
MOV10
MTF2
FGF13
TRIM14
ADAR
KMT5C
COX6B2
ALPL
SOCS3
KDM2B
F11
GADD45G
MVB12A
BST2
GABRQ
PCDH1
NFKB2
CCL2
TBC1D30
NDUFA4L2
STAC3
PCGF6
TESK2
MMACHC
OR6C3
MCOLN3
URM1
FAM24B
LRRC74A
ANGEL1
GMCL2
DUSP12
ARF6
CFAP410
MGAT4C
IL21
ARHGAP22
PEX12
AP2B1
FRMD7
MID1
USP32
CDC25A
EPHB3
SCAF4
ASXL3
FAM180A
RIF1
WDR49
TECR
ABCA13
KANSL1L
SGMS2
SOX2
HHIP
OCSTAMP
AASS
DNTT
CRYBB1
UTS2R
NEUROG3
TSACC
CCT3
SLC46A1
C1orf100
PLA2R1
RNASE9
ABCA4
LOC100996842
ZNF664-RFLNA
ZNF664
CCDC92
MPDU1
SOX15
GRIP2
RAB15
FNTB
SLC7A5
ABL2
TRIM16L
SYTL2
PLPP3
ZNF438
MPZ
SDHC
FAM131B
SLC10A6
ARID3B
MT1E
HSPG2
ETV4
EPB41L4B
IQCF2
LHFPL5
CLPS
SLC39A8
MINAR1
SCN5A
NAA50
ATP6V1A
CCDC167
KCNN2
NEUROG1
BRDT
NT5DC1
SCARB1
TBC1D1
ZNF649
GABRB3
ATP6V1G1
GRAMD2B
SPTY2D1
OR2J1
OR2B3
PKIG
ZIC3
ST3GAL6
PBDC1
SERINC3
C16orf78
CFLAR
LRGUK
NBPF19
NBPF26
NBPF14
RNASE10
SLC25A5
TTC13
ARV1
ZXDC
ZNF536
PCNX2
BICRA
ETNK2
OCM
SOAT1
C8orf76
CDH26
GAS1
EIF4A2
TESK1
KAT8
TINAGL1
ZC3H12B
BLOC1S2
EBF2
BEND7
TLL2
ARSL
NKIRAS2
DNAJC7
FCRL4
SLN
ELOVL6
KLHL5
NANOGNB
CLEC4C
TCEAL3
PDPN
POU5F1
PRRC2B
CEP135
AMHR2
FAM126A
SLC35F6
FUS
CCNT1
CCDC85A
TEX49
SPIN1
FXYD6-FXYD2
FXYD6
ZNF75D
ETDC
ZBTB45
FRY
PPP1R18
NRM
RTL8C
AGL
SOX5
KNDC1
DHRS3
SRSF4
ZNF624
CDH4
PRMT2
PXDC1
CAPZA2
ZMAT2
SLC25A12
CECR2
ARL15
IL22RA2
SMAD3
UBQLN4
RAB25
LAMTOR2
NMNAT3
ARHGAP36
BUB1
GPC4
SHF
ZNF600
RAB40AL
CCDC172
TRIM71
TP53
WRAP53
CCDC9
MPV17L2
MAD1L1
ITPKB
RAD54L2
ADAMTS9
B4GALNT2
CKAP4
GPR149
MAP4K3
GPM6B
ZNF202
RNF187
NAXD
THEM5
RIC8B
ERVH48-1
C1R
VSIG10
PMEPA1
CER1
CCL26
FZD5
PRKAA1
MS4A12
SLC66A3
MCHR1
SRRM4
C19orf25
TRPM3
PRR14L
DEPDC5
TBC1D23
SLC13A2
TUT4
FAM200B
KCNF1
OR5H1
OR5H14
GATA3
ADGRF5
TEAD1
GJA10
MRPS25
HYOU1
VPS11
SQSTM1
MGAT4B
THOC2
TUBB1
THBS2
ATP5F1E
HLA-F
MARS1
ARHGAP9
SMIM14
NECTIN4
RTN4
ARID5A
DCLK1
MORC1
VOPP1
KRTAP3-2
KRTAP3-1
BEST3
SVOPL
NUP205
PRDX4
NCBP3
MOB1A
ETS1
AKAP7
SPATA22
INTS9
HMBOX1
PROM1
MSH6
NRROS
BLCAP
GNAI2
LHX2
CR1L
IGSF1
RYR2
PADI4
CAPN13
HLA-DQB1
ADGRD1
RBP3
RAC3
SLC35E4
CATSPER3
DCXR
CENPA
RASAL2
TMEM63A
LEFTY1
SLC2A11
KCTD7
SERPINB6
CCM2
DERA
AKAP1
IFRD1
ADGRL2
ACSL1
PROCR
RPS10-NUDT3
RPS10
EPB41L1
RPSA
PIN4
PINK1
DEFB107B
DEFB107A
NEB
EFCAB8
SURF6
SPP1
BTNL8
ELAC2
LOC150051
TMPRSS11F
EEA1
SLC5A9
HSD17B4
GALNT8
PRRC2C
ZIC2
ZIC5
CAVIN3
SERPINB8
HCAR3
HCAR2
ZSCAN12
FRMD4A
OR2S2
RNF135
ANK2
ZNF532
MSX2
PTPN2
ECHDC1
SUCLA2
BCKDK