ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852808 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◣ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
ANKRD35
KRT31
LGALS8
GABPB2
CELF3
RIIAD1
LFNG
SRP68
ARID2
PTMA
NAV2
MTF2
ZMAT4
NKD2
CDX2
GEMIN4
CCPG1
C15orf65
SIPA1L2
LRRTM2
CTNNA1
FAM227A
CBY1
PYM1
DGKA
GALNT10
MAMDC2
BTBD11
TNFRSF11B
COLEC10
SEM1
LRP12
HES1
DPYSL3
CEP20
SRGAP1
NOTCH1
RORC
ECT2
MED25
FUZ
TMCC1
ALDH1A1
TMPRSS15
USP3
TARS3
C2CD4D
FSCN1
LYPD6B
LYPLAL1
DUX4
ANKRD33B
NDUFB5
MRPL47
IFRD1
PRR15
ERMN
ZNF750
MRPL36
NDUFS6
SNX27
PER2
TGFBI
PIPOX
KIAA2012
TTC39C
GSN
SEMA4D
HAUS6
TSKU
CADPS
ERG
LRATD2
SLC12A7
DSP
FGF12
MSRB3
RNF145
NMNAT2
ANKRD6
ATP8B1
PTGR1
CIT
POLR1F
GGH
MPP2
MARCKS
HDAC4
LOC100506422
C1QTNF7
PSEN2
NRCAM
ERCC4
TASP1
RBM48
PEX1
POGZ
CCT2
EPHX3
MRO
SPHK1
EPYC
RSPH4A
TNRC18
LOC100129484
PRSS23
NEDD9
MATR3
LAP3
ANKRD44
DNAJC6
GCNT1
IL21
VWA2
NTN5
PPP1R14D
BAG3
WIF1
TLE3
ZDHHC3
EXOSC7
PLPP2
TTPA
SELE
LINGO1
CLEC4F
SOX21
PLEKHG1
SPRY4
STXBP6
PDE4DIP
MACROH2A1
RPGRIP1
DCSTAMP
IGF1
SLC2A8
SLC25A25
NAIF1
TGIF1
COA8
BAG5
ITGB3
SLCO5A1
ADCY10
MAPRE3
GTF3C3
C2orf66
SCN1A
ESRP1
ADAMTS19
KLF6
ARHGAP8
ARNT
SMCO1
KRTAP3-2
KRTAP3-1
TMPRSS7
BCL2L1
CLIC5
UPF1
TUBB2B
ETV5
VWCE
MYC
SLC20A2
ETV1
CYP24A1
FERD3L
LSM5
AVL9
ACSS3
THEMIS
PTPRO
LOC102724770
DGCR6
SACS
SMARCA2
NES
MTRNR2L8
SPRED2
PLAGL1
GAST
WDR74
STX5
METTL11B
SOX6
HMGB1
SOX2
SMAD7
LRRN1
LRRC10B
COL17A1
DNMBP
ZSCAN2
MUC1
ATP1A4
REST
OTX2
HDAC9
AGO1
LMCD1
CACHD1
ARHGEF38
ANKRD1
NR5A2
LRRN3
ID3
TERF1
SOCS3
TMPRSS11E
CD82
FLVCR1
DUSP6
DNMT3B
ITGB8
MUC4
MUC3A
ZFHX3
KLHL7
WFDC8
NTRK2
FGF1
OR5AR1
TENT5B
GLRA1
NRG1
PPBP
PF4
GRK6
BCOR
TNNI3K
FIGNL2
MTHFD1L
RMND5B
ZNF608
SPATA45
RPH3A
KIF21A
BDH1
TDGF1
PIM2
ID1
FGD4
SFRP2
GDF11
DPPA5
ZBTB8OS
RBBP4
APBA2
ATP8A2
ZNF483
MOBP
TARS1
SMPD1
URM1
GNAI1
CD99L2
TCF7L1
LRRC2
SERINC5
SLTM
TRIM48
SNRPN
GAS1
ITPRID1
UGT1A6
BTG2
ZNF436
STON1-GTF2A1L
GLI2
RNASE6
C1orf127
USP44
SSB
LZTS1
ADAM28
DMXL1
FGFR2
EDDM3B
TALDO1
SHCBP1L
SHC1
FLAD1
CKS1B
HOXB1
DDX17
FGD3
MLEC
APOBEC3F
SGK1
PPP1R16B
TRIM2
ABHD11
FAM222B
RIPK1
LCA5
ZNF775
RNASET2
C9orf85
ICMT
HES3
KIF5C
CLDN9
MTRNR2L1
GBX2
ETV4
PUF60
PHC1
GIMAP5
SAMHD1
CDC14B
GXYLT2
MTRNR2L2
MSH3
DHFR
CLDN6
CRYAA2
CRYAA
PDPN
GOLGA6D
RCN1
TREX1
SHISA5
GADD45G
SCN5A
MID1
PRICKLE1
ZSWIM3
ACOT8
CYP1A1
GLYATL1B
ZBTB40
ABHD17B
OBI1
FAM174B
GSX2
VCAN
ITPRIP
DHX32
SRRM4
TPH2
NANOG
SNX16
HESX1
GAD2
PBX2
GPSM3
SLC7A5
CBFA2T2
TMEM47
BFSP1
RPS24
PARP1
PREX2
FZD2
PHLPP2
NFE2L3
SAMD5
CRH
LIN28B
SNURF
GPRC5B
ZNF398
CDYL
SCGB3A2
UQCRHL
POSTN
CA6
TMEM70
PGPEP1
NADK
TEKT3
PALM2AKAP2
FBP1
TRIM24
ASXL3
SLC36A2
LRRTM3
FZR1
MFSD4B
TUBB2A
LDB2
TESK2
PPP1R16A
ECE1
RFX4
FBXW11
KDR
SORBS2
ZEB2
AMN1
TMEM167B
MTM1
TRAPPC8
PSMD9
HPD
NAA50
CAMTA1
ATP6V1A
PHF5A
ACO2
MRPL20
VENTX
UTF1
LY96
SMAD3
FOXH1
HSCB
CHEK2
DDR1
LIMCH1
PMEPA1
FAM120B
TIMP4
KMT2B
WDR49
HOPX
CSAD
TBC1D16
DLL1
SYT2
CHN2
FOXB1
TNC
SGPP2
NCDN
KIAA0319L
ZNF740
SASH1
ZFC3H1
THAP2
GOLGA6A
VIM
SALL4
ZCCHC3
C20orf96
DCAF4L1
RGS3
COL23A1
MMACHC
FRAT2
SLC30A9
SH3GL1
CHAF1A
NFE2L1
RASGRF2
ARAP3
C1orf100
GJA1
KDM2A
TMEM41B
KCNJ1
PSIP1
SOX14
TOMM40
FOXP1
LHPP
NOTCH2NLC
DOK7
IQCH
AAGAB
FBXL19
ST18
GSAP
GPR85
PYGB
MORF4L2
POU5F1
RASAL2
HGS
ARL16
GNAI2
MAD2L2
DRAXIN
SYBU
SELPLG
ACVR1
TTYH1
BUB1
SCARB1
HBG2
HBG1
SALL3
EPHB3
STN1
MFHAS1
MDN1
GPC4
IER5L
TPST2
SOX5
TRIB2
MCCC1
TBC1D14
FBXO40
PSMG3
ITGA2
IFT80
ZNF343
SH3BP4
GET3
CDC42EP3
CCBE1
ZSCAN10
SERPINA1
OSBPL1A
FZD8
MED12
IL2RG
GOLGA6B
SMYD2
OR2T1
ENSA
NDUFS5
CNN3
CYP2S1
SCAF4
IGFL3
HOXD11
NDST1
HHIP
PALLD
KCNN2
BEND3
GOLGA6C
CUEDC1
MANBAL
DGLUCY
CREB5
ZNF18
KIFBP
FRG2C
CYTH2
CDH18
P2RY12
FGF2
PTBP2
CTNND2
SHF
SLC34A1
PFN3
TES
PTPRN2
RBFOX2
CERCAM
TOX3
RASA1
MYCL
ONECUT2
ZYG11A
GDF3
NOTCH2
SMC6
GEN1
GCNT2
ETS1
H3C15
H3C14
HMOX1
FAM180A
ADAMTS18
FMN1
EAPP
URGCP
LIMK2
CELF4
ARIH1
ZNF335
NBPF15
HOXD13
HOXD12
PNRC1
FBXL14
CITED2
PDCL
KDM2B
CEP41
EXT1
CRYGB
TUBB
MDC1
SLC35A5
ATG3
PRRC2B
LMNA
PDHA2
EPB41L1
CCDC200
BICD1
ATXN7
DICER1
GPR31
TCF4
PEAK1
HMG20A
FYN
PHAX
ALDH7A1
WNT5B
MKRN1
ZBTB45
B3GALT5
BCL9
CPA2
PRKG1
GCSAM
RTN4
OLFML3
SYNDIG1
CHRNA1
PLEKHB1
ANXA2
URGCP-MRPS24
DAGLB
TRPM1
PDE4D
MYSM1
CAPRIN1
PRDM14
NUAK1
SFRP1
KIAA0895
THOC3
SRSF7
SNAPC3
IL34
REV3L
ATG10
SLC39A8
TAF13
CTBP2
UNC13B
PCBP1
LIFR
CER1
HSPG2
LEFTY2
PHTF1
FRY
FOXA2
CTIF
NEUROG1
KIF6
BTBD10
C1orf198
DTNA
ADAR
ANK2
LARP1B
MBNL2
CCN2
WDFY1
CCDC33
CCAR2
C8orf58
DGAT2L6
SOCS5
PGK1
SYN3
GPM6B
RGPD2
RGPD1
ADGRL2
ANAPC4
DHDDS
WBP1L
NXPH1
SLA2
FOXD1
ABO
SGMS2
ADA2
NEK6
SRCIN1
CAPN3
L1TD1
NUAK2
ZNF304
CSK
AGK
GABRB3
NECTIN1
KNDC1
LRAT
OR6A2
MAP6
LRTM1
ZNF536
DDX43
SMIM32
SULT6B1
BCAT1
WEE1
KDM3A
SLN
SEPTIN5
DACT1
PPP2R3A
ZNF532
NOTCH2NLB
NOTCH2NLA
SNX19
FAM219A
DNAI1
ABCB5
GTF2I
PSMG2
ALDH1A2
CARHSP1
CACNA1S
ASCL5
OCSTAMP
NCOA3
FOXP4
SDK1
AASS
DDX46
LIN28A
MBNL3
SLC33A1
TRIML2
VPS37B
PLA2R1
TRIT1
RIC8B
FXYD7
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
SPIRE1
PCYT1B
RARB
CHFR
HES5
ZNF296
PANK4
GEMIN7
ADGRD1
TJP2
DPH6
CXADR
NPSR1
STOX2
SEMA6D
NRBP2
DST
EBF2
AEBP2
VOPP1
SMIM14
ATF4
CHD6
FAM107A
USP7
GABBR1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
SPIN1
AHNAK
INO80D
DACT3
FAM181A
WDFY2
SLC10A2
SOX13
ATXN3
NWD1
TMEM132B
ZNF195
KCNIP4
AUH
PRTG
MAGEB2
UBQLN4
RAB25
LAMTOR2
UGP2
H2AC19
H2AC18
PAFAH2
TEAD1
PRSS48
PACSIN2
COL4A2-AS2
FXYD5
ZBTB20
ZNF770
PSME3IP1
FHL1
ZNF565
ZNF674
SLC66A2
MRS2
HSBP1L1
ADAMTS9
UHRF1BP1L
KRT6B
RAX
RNF43
BZW2
ANKMY2
TRNP1
NEBL
SLC46A1
LIPK
FEZF2
CRISPLD1
LRRTM4
FAM110D
MARK2
LHFPL4
LRIG1
TMEM170A
TCF7L2
ZNF781
PHC2
MOG
EFNB2
KMT5C
IL7R
COMMD7
IL17RD
ERVH48-1
NXPH2
PRODH
LOC102724788
NDUFV1
TRDMT1
RBM22
PIN4
PKIG
CACNA2D1
TBC1D1
FOCAD
TMC5
WNT2B
MAST4
MCF2L2
STK31
ANKRD40
DUSP1
ABCC2
TUT1
MTA2
SEPTIN9
MEIS2
MSANTD4
FZD9
TIAM2
OCM
KANSL1L
PPP1R15A
DRD1
ITGB5
PLSCR4
PARP16
MMP10
DET1
KCNMB4
SPHK2
ARID5A
GID8
DIDO1
TBC1D30
SENP2
PRR5L
TSPAN14
GABRQ
DHRS3
TCP11
PDE1B
LONRF3
FUS
EIF4A2
ARHGEF4
PPEF2
PITPNM2
BOD1L1
TMUB2
KLF7
BORCS6
G3BP1
ANGPT1
INSM1
SORT1
RAB15
EMSY
SPATA13
KLF5
FAM20A
PCNX2
PCDH1
ACOXL
TP53INP1
EOMES
OR5K3
SPATA22
NFASC
EYA1
RAPGEF5
MSI1
GMCL2
FRG2
ACSL6
SIK1B
SIK1
SIN3A
ITPK1
DNTT
GALNT18
RMND1
ARMT1
CDC42EP4
AK4
RASA3
ZIC4
NRIP2
TNRC6A
PXMP4
ZXDC
TRPC4AP
OSBPL2
FAM98A
ATP6V1G1
CELSR3
SEC14L1
ETFB
LBP
ESX1
TRIM62
TAGLN3
ART1
NDUFAB1
PHETA2
NAGA
TET3
UFD1
SMPDL3B
CDC45
FMNL3
ARMC12
IRAK1BP1
TMPRSS9
AASDH
NKX2-2
FGF13
TMEM43
CHCHD4
TP53
SMN2
SMN1
WDR55
DND1
KRT8
UBR2
PRUNE2
BAIAP2
ETV6
CST1
ZBTB38
TRIM28
POLB
DPPA4
CRYBA1
SLC2A14
CHD7
ZNF814
TRMT10C
SYAP1
MT1HL1
ESRRA
CTPS2
CATSPERZ
TP53RK
FAM24B
GLDC
POU3F4
EPB41L2
SLC3A2
PCDHB9
PCDHB8
PCDHB7
PCDHB16
LEKR1
CHD1
MEX3A
SLFN12
KLHL3
EPAS1
MFSD13A
C10orf95
PAK1
ROR1
PIK3C2A