ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584308 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◣ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
PSMD1
NUP205
RABL2A
POLR3F
DZANK1
NME6
IPO13
RABL2B
NVL
CACTIN
RWDD1
TAOK3
SUDS3
RPL21
FARSB
C19orf48
TBCK
AIMP1
NUP85
POLR2E
HSPA9
PAK1IP1
C6orf52
VDAC2
MAPKAPK5
PES1
ATP5MG
FAM187A
EFTUD2
CCDC103
NCLN
ANAPC7
SEC61B
MRPS7
GGA3
PSMG2
CEP76
HADHB
HADHA
GOSR2
ZRANB2
DCTN1
EXOSC5
BCKDHA
VTI1B
ZNF576
IRGQ
BLCAP
PNO1
UPF2
IQCG
RPL35A
STAM
LYRM4
FARS2
DYNC1LI2
XPNPEP3
ST13
STAM2
PI4KB
SART3
ISCU
NEUROG2
SF3B3
COG4
PCBP1
PSMD12
TSN
TMED1
SELENOF
HS2ST1
RPS27A
CLHC1
FZD8
CAPRIN1
NDUFA4
CDX2
ACTR10
UFM1
NBAS
ADK
AP3M1
SRD5A1
NSUN2
RPS12
LBX1
SMPDL3A
VARS1
ZNF503
RBBP5
RPS23
ATP6AP1L
SMC2
SUPV3L1
MRPL11
TSNAX
SLC35B1
PRDM12
ERRFI1
ADAM18
TPM1
EVA1A
ANK2
DUX4
REXO1
SKP1
TTC8
COX7A2L
PDAP1
BUD31
FGF19
RABGGTB
OSGEP
APEX1
APOM
BAG6
PROSER1
NHLRC3
C16orf91
FOXP2
DCTN3
ARID3C
PIN4
ICE1
MYO10
CCN1
LRGUK
ARHGAP11A-SCG5
ARHGAP11A
FAM104A
C17orf80
MRPS5
GOLGA5
MYLK4
DPH6
LRIG3
TMEM107
PAF1
MED29
TMEM14A
EIF4ENIF1
USP1
RBKS
BABAM2
SYNPO
SYBU
DMRT3
TMEM120B
HES3
IGFBP2
PDHB
SEC22B
MALRD1
SOX21
PTGES2
FRG2C
DBX1
DAPL1
RGS12
MOBP
ABLIM3
NEUROG3
C12orf73
FOXD3
PAX8
RPL7
RDH10
BICRA
PDZRN3
TLE4
ZFHX4
MXI1
IGFBP6
SOAT2
NR2F1
RGL1
SEC11C
VEZT
FGD6
ABCG2
KCNK16
PHC2
ARHGAP10
UBE2I
LRATD2
NFKBIL1
DDX39B
ATP6V1G2
KRT20
MEIS2
ARHGAP24
PHOX2B
SPACA1
SUCLG1
HOXA4
TLE1
KDM8
HES1
EIF2S3
LRIG1
GPR176
RPS29
LRR1
PCDH11Y
COMMD1
CCT4
ZNF383
SEMA6D
CEP41
STK36
RNF25
CCDC33
LMO4
MRTO4
EMC1
ARHGEF28
OR6B2
NDUFA10
REV3L
CCDC88C
NUTM2D
MNX1
CACNA1D
TAF9
RAD17
AK6
TM9SF1
ZNF608
VCAN
HHIP
RAI14
PRRX1
NEK3
B3GALT5
KDM2B
SULF1
GADD45GIP1
CHMP4C
ATOH1
METTL24
TLE2
ZFX
TEX2
STXBP5L
FHL1
WT1
CLEC18C
BFSP1
PKDCC
METTL11B
NRG2
ELMOD2
BNIP3
RPS24
POLR3A
BAIAP2
SALL1
TP53INP1
TPO
TLE3
CNPY2
RBP3
ALKBH5
FGFR2
PJA2
HOXA3
CNTN4
DTX4
PLEKHA5
ASXL3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TBX3
SLC7A5
MTMR7
TTR
TYRO3
LMO1
PDE6B
TNFRSF19
CETN1
CR1L
MAB21L2
TESC
TPST2
SLA
OCLN
DMBX1
HNF1A
NPAS1
GORAB
MSX1
GFRA1
SECISBP2L
TANGO6
CLDN2
NEUROG1
PDE1B
NXPH2
TRABD2B
PDE12
RUNX1T1
PPP1R12B
DHX32
OAZ3
CYP26A1
FRS2
PIK3C2A
NEUROD1
SLAMF8
CCDC198
SLC14A1
HOXA2
VOPP1
CATSPERG
GTF3C4
DDX31
HOXB3
DLX4
HOXB4
CD69
FRG2
PPFIBP2
RPN1
TRMT9B
GCSAM
CLGN
NCOR2
SLC10A2
CS
TBC1D8
AGMO
RARB
TCF7L2
ZNF367
CXXC4
GALNT14
PANK4
HES5
HOXD3
MEF2C
NOTCH1
CNN3
PPBP
TTI2
ZCCHC13
SOX6
BAZ2B
BBS9
ALDH1A2
CPEB2
BHLHE22
SALL4
ATOH8
SNCG
MMRN2
CTXN3
SLC39A6
ELP2
CDH16
HOXB1
SOST
SCHIP1
ST8SIA3
ZFHX3
ECM1
HOXC4
PTGR1
CDC73
ADGRL2
CER1
RBBP7
ID1
KIF21B
CAMTA1
PRDM13
ADM
SYTL2
RARA
ZDHHC1
RHOB
ZGPAT
ARFRP1
PAM
GATA3
CHD8
TCF4
THRA
PARS2
MRPL38
GAD2
JAKMIP1
EPB41L5
OTUD6A
ST18
OR5A2
PRRC2C
ABCA4
TMEFF2
CLEC18B
AGPAT4
PCBD2
CBY2
TMCC3
DUSP6
PRKCA
ZBTB2
LIMK2
NXPH4
SLC35E3
NUP93
TMEM132C
WRAP53
TP53
CCDC169-SOHLH2
CCDC169
ID2
RBM20
P2RY14
CCDC200
KMT2A
LIPG
ALG14
LIN28A
CITED2
GJA1
PDPN
WDR59
LMO3
TRIM2
SASH1
TNRC6B
KCNIP4
PDHX
APIP
ZNF746
PHACTR2
ALOX5AP
SSBP3
AJUBA
OAZ2
ARSF
PIMREG
FLNB
CNTN1
CFAP69
NEUROD4
TFDP2
MXRA7
DMRTA1
INSM1
LHX2
AXDND1
PMFBP1
DLGAP1
NDUFB3
FAM126B
LRRC10B
FOXP1
ARMC12
PCDH18
TWIST1
HOXA1
DAAM1
KCNN2
TAS2R8
TAS2R7
FOXB1
FAM107A
SPON1
ANKS1B
ACBD5
UTRN
TPRA1
REC8
LIN28B
GPC6
FERD3L
METTL25
CCDC59
SOCS3
IPO11
BMP5
FAM120B
DLL1
LZTS1
FHDC1
ERCC1
IGFN1
FMO3
CDC42EP2
RPS10-NUDT3
RPS10
FABP5
LAPTM4A
SH2B1
VANGL2
POU2F1
PAX3
GALNTL5
ARID5B
CDK14
USP17L20
USP17L22
USP17L11
USP17L21
USP17L12
JDP2
USP17L18
SHOX2
RSRC1
SVOPL
PMAIP1
ZP4
SKIL
WDR74
LEFTY2
CDCA7L
DLL4
ANKLE2
PRUNE2
ID3
SP5
RBPJ
NFE2
DNAJB7
ARID3B
GATA4
TMEM70
ELOC
MYRIP
GADD45G
TRIP10
GPR108
DSCAML1
MTRNR2L2
MSH3
DHFR
POP5
GRSF1
ARSG
KAZALD1
MTRNR2L1
RASSF2
PAX6
MSX2
MRPL34
ABHD8
HOXC5
LPIN1
IER3
FLOT1
NDUFS7
FGR
IFI16
PLEKHO2
INAFM2
MBD2
TMPPE
GLB1
SPCS1
GLT8D1
CBX4
SPATC1L
RNF149
SH3BP2
UPF3A
LYL1
HNRNPA2B1
CBX3
HUS1
DHRS3
HEXIM2
KDM6B
GTF3A
ETFBKMT
NELFA
HSPA1B
ARID5A
NEO1
KCNAB2
JAK3
STK38
MRS2
PARK7
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
DDA1
SEC14L1
SMC6
GEN1
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
KAT6B
HNRNPD
ATG16L2
HOXC6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBXN10
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
CCDC88A
SNX1
CIAO2A
SPECC1
ARHGEF10L
NADK
BRWD1
DGKZ
KLF17
PLAGL1
FGFRL1
BIN2
ENO1
OTX1
WDR6
NBEAL2
NKD1
SKIV2L
NELFE
EFHD2
FAM110A
NCOA2
TMEM104
NAT9
MTMR4
DIAPH1
ZNF76
EMP3
CCDC114
NBPF1
USP15
PLEC
WNT10B
SNX3
POR
LRRN4
TRAF4
ZSWIM6
MEF2D
KMT2E
CABIN1
RASSF5
LPCAT3
MTRNR2L8
LNPEP
RARG
IMPG1
SPG7
CPSF4L
LIG3
DDX3X
DENND2D
PPP1R18
CDC42EP3
CCDC174
DIAPH3
IQCH
AAGAB
NFKBIA
HEBP2
CBFA2T3
ZCCHC3
MAMDC2
CD38
VAV1
ZNF414
INAVA
BCL3
TRERF1
RAC2
ATP23
ZNF718
ZNF595
CMTR1
PNKD
PCNA
POLR2J3
TUBB
IQGAP2
MEOX1
NTRK2
ING1
RNASEH2B
GPAA1
EXOSC4
PPIB
MINDY2
H6PD
CNOT2
SLC9A1
SIRT4
OTUD7B
FTL
RXRA
GALNT10
PKN2
NDFIP2
MAPKAPK3
PLCB2
SMAD3
RYBP
USP3
CDX1
ADCY7
TRIM48
SHB
NKIRAS1
TXNRD1
MUC12
PEX14
DFFA
ARHGAP4
CYP51A1
YTHDF2
SMARCD2
PKM
IFRD2
PCTP
PRDM1
HESX1
CFD
TLE6
MRPS24
SLC35E2B
TBRG4
NR1D2
ADORA2A
COL23A1
RNF166
CYCS
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
SP7
ZDHHC4
HMGCS1
ARIH2
MECOM
CBWD5
CBWD3
LTBR
TUBB3
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
ERI3
ZNF740
CSAD
SOD2
KCTD6
CPT1A
IL6R
PRSS56
AKIRIN1
KIF26A
SLC35E2A
ABHD11
KANSL3
FER1L5
CYTH4
HOXB5
MYEOV
PDE4D
PTGES3
HAND1
FOS
AGO1
NR2C1
MBD6
DDIT3
TMEM222
NOTCH2
FAF2
C12orf29
RND3
SRPRA
RBL2
FCHSD2
SSX2IP
CTTN
PXYLP1
ZNF341
AHDC1
ATXN1L
UPP1
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
CALM2
ANKRD13D
DTNB
RNF103-CHMP3
RMND5A
TYROBP
UNC13D
SEMA4D
TSPAN16
PRRC2A
AIF1
PIP4P2
LAPTM5
MAP2K1
MYADM
CENPH
ZNRD2
GATD3B
GATD3A
FAM89B
EHBP1L1
CLTC
SEH1L
RFESD
ZNF25
USP42
ARHGAP45
RXRB
MTCH1
MAD1L1
SYNJ2
KCNH2
IL21R
ZNF3
STX18
PHF19
PPCDC
DGAT2
THRAP3
RNF125
SLC43A3
LYPD6B
ERLIN2
RASGRP2
ARHGEF1
PEAK3
MRPS31
H2BC5
H1-4
GFRA3
COX5A
RAD50
MIDN
NAGLU
MAP1S
EPM2A
EIF4H
PKNOX1
ATP8B4
HSD17B8
ZBTB17
TTYH1
PSMD3
PIKFYVE
SPATA25
CTSA
HECTD3
BHLHE40
KRI1
CDKN2D
NR1D1
ARL4A
SBNO2
SDE2
KAT6A
FBXO41
RWDD2A
PGM3
MAPRE2
ARHGEF38
SMPD1
ZBTB25
ZBTB1
KEAP1
MAPKBP1
BCAT2
FMNL1
PRKCD
CPVL
CHN2
WTAP
CCDC88B
STRADA
NUBP1
TMEM123
CBWD6
MTF2
SLC22A2
CASC3
TCHP
SLC39A7
IFNGR1
ASNS
GRK6
MAGEF1
MYCBP2
ZNF318
CPNE5
RCOR1
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
LSM5
AVL9
NIBAN3
USPL1
HMGB1
NTAQ1
MC1R
FXYD2
USP17L15
RASL10B
PANK2
UBL7
C1orf159
ATAD3B
SCMH1
H3C12
H2BC17
H2AC17
ITPRIP
GPX4
MAST2
OR2L13
OR2AJ1
SACM1L
DYNLT1
NGRN
SH3BGRL3
MCU
HES7
BUD13
BNC2
TIGD5
EEF1D
DPEP1
SCAMP2
VPS37C
RUNX1
RNPEPL1
RER1
MORN1
CAPG
GRIP1
CISH
NIBAN2
DLG2
EOLA2
ZNF436
ARF3
GPSM3
GPATCH8
RPL17-C18orf32
RPL17
C18orf32
TAF12
NCBP2AS2
NCBP2
LGALS1
OST4
LIX1
ARHGAP27
YBX2
USP21
CYB5R4
ARHGEF18
GABRB2
MRGBP
DONSON