ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
STX5
GSTA4
MAMDC2
EAPP
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
MTRNR2L2
MSH3
DHFR
PHC2
KIF5C
NUF2
COL23A1
MTRNR2L8
DUX4
MTRNR2L1
FRA10AC1
EIF2D
DSTYK
TAF12
DCP1A
S100A2
GBA
TRIP4
PCLAF
TMEM107
PTPRN2
RAD54L2
TBC1D19
H1-2
MUC3A
HMGB1
USPL1
CDK5RAP1
STX16
SCAND1
CWC25
DRG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SF3A3
RBBP5
POLDIP3
RPS7
STX18
NDUFS3
KBTBD4
FAM180B
DHX8
H4C12
H4C11
H2BC14
H2AC14
ANKRD35
ARL4D
TRIM48
PLEKHM3
ATP5MC2
TBL3
RPS2
RNF151
NOXO1
NBPF1
RPL37
CARD6
SAR1B
TRIAP1
COX6A1
H4C6
H3C6
H1-3
RGPD2
RGPD1
SMARCD2
GEMIN7
ZNF296
S100A14
S100A16
RCAN1
PTPRH
SELENOH
NME1
CTNNB1
NTSR1
CCNL1
ZBTB45
SLC27A5
PARP16
SECISBP2L
SSBP1
CRB1
UTP3
TMEM167B
H2BC21
H2AC21
H2AC20
TTC26
MRPS23
SLC24A1
MTF2
GTF2H2
H4C7
H3C7
BNIP1
INTS12
GSTCD
MAN2C1
RPS6
WDR36
FAM3C
YWHAE
UCKL1
MLEC
SERPINE2
NDUFB10
RPL3L
NIBAN2
H3C13
H2BC18
ERCC1
DMAP1
LAG3
LY6K
DPP9
LRRC37A3
STN1
GTF2H2C_2
GTF2H2C
SNAP47
JMJD4
FXYD3
AURKAIP1
TATDN3
NSL1
TUT1
MTA2
PSMF1
SIRT4
PPP6R1
SRGAP2C
SRGAP2B
RAB5IF
SNX24
ATF6
RBM15B
MANF
STAT3
LAMP1
TBC1D13
MRPL30
MITD1
H3C3
H2BC3
SLC27A1
TARS2
TMEM222
ALG10B
RAB13
RPS27
MYO9B
HAUS8
FCGR3A
FOXJ3
ZNF207
C17orf75
DEFB132
GOLGA7B
CD22
YIPF2
TIMM29
POLG
METTL25
CCDC59
RARS1
EFCAB2
HPCAL1
MRPL16
WSB2
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
H2BC5
H1-4
TBL1X
RPL12
LRSAM1
PTPN6
C12orf57
H2BC15
H2AC15
PSMD3
NOTCH2
SMG8
KMT2C
RPS20
FAM227B
DTWD1
GTF3C3
C2orf66
TEX46
KDM1A
DDIT4
KIF2C
PRR5L
COMMD9
MRPL21
IGHMBP2
NOC4L
DDX51
JRK
COX5A
KBTBD6
SLC35E2B
BHLHE40
TACO1
COMMD2
LARS2
PDCD6
SH2B3
POLD1
NR1H2
NDUFC2-KCTD14
NDUFC2
U2SURP
DUSP7
STX1A
CALHM1
MDM4
SLC44A1
EXTL1
UBQLN4
RAB25
LAMTOR2
KRR1
RPS5
ZNFX1
SDHAF3
TMEM262
MED18
ZER1
TAGLN2
TSSK6
NDUFA13
AGK
GNAI2
RANBP2
ITPKC
COQ8B
NKIRAS1
RPL15
FAM98B
WWP2
NOB1
MAPK1IP1L
NUP107
AP5S1
USP3
CDK2AP1
TCEA2
TTC1
RUVBL1
MTERF4
NCBP3
SSBP2
SAMD4B
GMFG
SOCS5
SPRY4
NMNAT1
LZIC
RPS28
NDUFA7
TDRD9
ATP5MPL
TAMM41
H3-2
MED23
TSPAN10
NPLOC4
PRKCE
SEC16B
BCAR1
TSC2
NTHL1
SEC13
MTIF2
DPY19L4
CDKN2AIPNL
NDUFA12
KLHL12
CCDC90B
TVP23B
MRPL58
PPRC1
GALK2
COPS2
USP4
WDR24
STUB1
JMJD8
HEATR1
EPHB4
PMS2
AIMP2
NREP
MRPL1
MKRN2OS
MKRN2
ASB6
SLC25A51
CDC73
KANSL3
FER1L5
MBTPS2
NPAS4
SOAT2
IGFBP6
METTL9
MRPL19
PCID2
CUL4A
INTS1
POLR2J3
DDX1
FRG1
PDP2
KDM8
PSMD11
UNC45B
NLE1
ANP32E
PTEN
KLLN
SRSF4
KNL1
ACTN1
RPS3
WNK4
VPS25
ELAVL3
NSFL1C
MOGS
MRPL53
PDE8A
SNAI1
INTS5
GANAB
GAPDH
TTPAL
ARL2BP
DCAF10
AAR2
KYAT1
IQCH
AAGAB
PUS7
RINT1
BUD13
UBOX5
FASTKD5
CCDC88A
ZBTB37
METTL15
KIF18A
VPS33A
CLCA2
SNRPB
H3C4
H4C4
H2BC6
DRD4
ZSCAN22
NCOA3
H2AC7
H4C5
H2BC7
BCL3
RBM39
TRMT61B
TMED2
MAT2A
NT5C
CLUAP1
C16orf90
PRKCSH
CCDC151
GFM2
PDE4DIP
SLC25A32
DCAF13
ID1
NFE2L2
LONP2
ABCC11
EIF3E
ANXA1
ADPRHL1
SLC25A13
ANGPTL4
PEMT
DPH7
DNAJC24
DCDC1
UQCC1
NID1
TOR1AIP2
TOR1AIP1
UBL7
DNAJC11
POMP
AP5Z1
BBS1
RPS6KA1
SLC20A1
STARD4
MICALL1
IL37
CDCA3
ZNF696
CATSPERG
H3C8
H2BC10
YWHAZ
FBXO46
MEIOSIN
SSNA1
ANAPC2
TTC4
YARS1
S100PBP
VTA1
NMBR
H4C9
H2BC11
H2AC11
ZWILCH
SNAPC5
RPL4
PHAX
ALDH7A1
H2BC12
H2AC12
AP3B1
FBXW2
SYT5
CALM2
H2BC8
H2AC8
DNMT3A
ASB2
RMDN2
PARP2
PHLDA1
CCNB1IP1
B3GNT7
ST3GAL2
NUP153
ELAVL2
SNRPB2
CCDC15
TRIM65
MRPL38
WASHC2A
ARID2
ADNP
DDX59
GSN
PARD6B
SULT6B1
SIRPD
RPL27
IFI35
SLC35E1
H4C3
H1-6
CHD1L
PRKAB2
LZTR1
ZNF3
COPS6
SCRN2
OSBPL7
LRRC46
WDR31
BSPRY
PANK4
HES5
PEX14
DFFA
CIAO3
PPIP5K2
USP30
H4C2
H4C1
H3C2
H2AC4
SACM1L
ALDOA
OGT
H3C1
H1-1
DAB2IP
GOT2
SPRY2
PA2G4
PPP6C
ZC3HC1
HEXIM1
RHBDL1
RHOT2
AP1G1
MYBL2
GARS1
H4C8
ZBTB40
VPS4A
LRATD2
PSPC1
ZNF721
PIGG
TPT1
LIMA1
COL16A1
TMEM101
SNRPE
TSNAX
ZMPSTE24
SAMD10
PRPF6
ELK4
H2BC17
H2AC17
TCHP
H3C12
UBA2
NUP188
DOLK
PYGB
CCDC125
HDGF
MRPL24
KIF15
KIAA1143
DRAP1
C11orf68
TEFM
PSMD9
HPD
GORAB
NAGK
EPHA3
GPRC5A
CCAR2
C8orf58
MRPL40
HIRA
NECAP2
ECSIT
CNN1
DISC1
EEF2K
WWTR1
AGMO
BANP
CCDC174
CALR
PEX12
AP2B1
RAD23A
ZC3H10
RPL41
ESYT1
ZSCAN25
TRPC4AP
TRIP6
SRRT
ZNF770
PLEKHB1
PPID
EFNA3
ANKRD63
ZCCHC4
PARK7
ARL14EP
G6PC3
LSM12
CDK12
MED1
CRTC1
COG2
WIZ
NRF1
TSR3
GNPTG
SMG7
EPRS1
SLC9A1
LHX9
C1orf53
ISLR
PRRG2
NOSIP
SH2B1
TUFM
TTI2
MRPS31
TOP3B
VPS72
PIP5K1A
GOSR1
POLR3E
ROM1
EML3
B3GAT3
ZNF594
MRPS24
DHRS3
TRIM62
ITGB3
USP48
UCHL5
RO60
ZNF789
ATP5MF-PTCD1
ATP5MF
COMMD1
ANXA2R
STYXL1
MDH2
POU2F1
AMOTL1
PDE6A
BST1
GID4
ATPAF2
SART1
WDR70
NUP155
ATR
MRPS14
NME6
RRP9
PARP3
EIF3H
RPL10
ITGA3
FBN3
SYMPK
FOXA3
TMEM127
CIAO1
CCDC200
SLC39A13
FAM193B
MTMR2
CSRNP1
CHMP4B
STAT1
ZNF212
POR
TM9SF1
IPO4
CREBL2
STK10
TOB1
TNFSF14
ZNF106
SNAP23
PAFAH2
DDX23
FBXO38
TMEM79
SMG5
RPTOR
CSDE1
NOC3L
KEAP1
TRIM16L
LENG8
VPS37B
H3C10
H2BC13
H2AC13
CSNK1G3
DMTF1
AXL
RNF10
COQ5
OTOA
NDUFS7
LDAH
DDX46
PDE12
ERLEC1
ASB3
MUL1
DR1
RASA3
MPG
RHBDF1
ZP4
KLHL20
GPS2
EIF5A
RNF168
PRKAG2
TRMO
PRDX1
NPR1
ILF2
TNFRSF10B
EXOSC8
ALG5
TUBB1
PRRT3
KRT31
PRCC
WBP1
INO80B
NFKB2
MRPS15
ZNF148
RUSF1
ISG20
EHMT1
TTC32
R3HDM2
INHBC
CASC3
ARRDC1
PRDM5
CT45A7
CT45A6
CT45A9
CT45A8
CT45A5
CT45A2
ING4
RBM28
TRMT6
MCM8
RIN1
BRMS1
B4GAT1
MCRS1
S100A13
S100A1
CHTOP
BCAT2
ZNF697
NFIB
CRTAM
SCRIB
PIGU
TIMM22
RAD52
USE1
DNAJB12
CLUH
COQ9
CIAPIN1
WASHC2C
TRMT1
NACC1
RFC2
SLC26A2
SRSF7
TAS1R1
NOL9
VPS28
H2BC4
H2AC6
IFNAR1
HTR5A
PAQR5
LRRC29
RPL29
TMEM199
SEBOX
POLDIP2
PCBP2
ARL8B
CNOT2
LRRC59
ATXN2L
EEF1A1
NANOS3
PGLS
BFSP1
SLC12A2
BCAS4
SLC25A45
FRMD8
KRT8
IL24
LRRC52
TMPRSS5
KRT18
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
SNRPD1
AAAS
PRR19
PAFAH1B3
CCDC85B
FOSL1
TESK1
AMACR
FGFBP3
TMC1
ZNF513
SNX17
EIF2B4
TOMM22
MIA3
LRWD1
ALKBH4
TOMM7
TRIM46
KRTCAP2
SPRED2
MKNK1
MOB3C
HSPA8
CSRP1
STT3B
TFB1M
ARHGEF12
MPHOSPH10
MCEE
CDKN2C
SCO1
ADPRM
FAM20B
LOC112694756
ZNF185
FAF1
SMIM14
PPP2R2C
CALR3
C19orf44
IPPK
FAM228B
TP53I3
SF3B6
KCTD5
SASS6
CCDC124
BMS1
ARID3B
ARHGEF7
HSPA9
FOXO3B
SRPK2
TMEM223
TMEM179B
GPR19
ARTN
LOC100509620
UNK
H3-3B
RPS6KB2
PTPRCAP
LMNA
STOML2
PIGO
FAM214B
URM1
MFAP3
FAM114A2
ZSCAN30
SURF2
SURF1
RPL7A
MED22
TAF1B
C16orf72
MSANTD2
OCEL1
UQCRC1
CLDN20
ADORA2B
ABCC3
PGAP4
FAM168A
SEC14L1
SCAP
ALG14
ATP6V0D1
AGRP
MRPL4
ANKRD13D
TRNAU1AP
RPL7
RDH10
MEMO1
CYP2E1
TUBG2
SPATA19
ZNF350
WASHC4
ACP6
ZNF668
ZNF646
SMIM12
NDUFAB1
ZNF398
TDG
C12orf73
ZNF425
DCAF8
MRPS21
TPK1
C11orf49
LEKR1
TUT7
USP1
FURIN
SLC35F3
NOL11
PMF1-BGLAP
PMF1
DYM
PRRT2
MAZ
ADAR
SOS1
NUP133
MNAT1
GRB7
LRRC49
MAST2
THAP10
NAA80
IFRD2
HYAL3
STAU1
SPATC1L
TOB2
PSMD6
TMEM250
MAD1L1
INAVA
PUM2
NUDT1
MRM2
DDX27
LDHA
DYNLRB2
CAMKK1
TRIOBP
EIF3L
ANKRD54
NDUFB8
HIF1AN
GATAD2B
GPAM
WASHC5
NSMCE2
TMEM126A
NUCKS1
PDS5A
RFFL
SH3TC1
DPY30
SPRYD4
THOC5
TIGD6
HMGXB3
MRPL39
MAP2K3
RICTOR
COX7C
SAMD1
MISP3
C19orf67
LUC7L
FAM234A
HIRIP3
COPS4
PURB
ADGRG1
STIP1
CSTF1
AURKA
NXF1
QTRT1
AVPI1